TCONS_00026385 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026385
Unique NameTCONS_00026385
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1175

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026385 ID=TCONS_00026385|Name=TCONS_00026385|organism=Clytia hemisphaerica|type=transcript|length=1175bp
GTCTGGATAGATTCGGGATTACTCTCCCGTTTCCTAGGTTACGTTTACAA
ACATGGTAGacgtaaacattcgaaattttttgcACGAAACGTGGGCAAAA
AAGGAGATGAAAATGGTTCTGTGGCTGAAAAAAGATTAACTTTGAAACAC
TTTTTGTGTTGTCGTACTAAAACATACTCTAATAtgaatttaaattcttt
tgagATTTGATTACTAAACAAGCAAAGCACAATGCCATTTGTCAAATCAC
CCAAACAAAACCAACCATTATGGAAAGAATGGGATCGTAGAGCACAAAAA
GAAGGTCAACTGAATACTTTCTATTCAGTGAATGGTGACCATTACACTGG
TGAATGGCACAATAATACTAAACATGGGAAAGGAGCTCAATTTTGGAAGA
AGACAGGAGCATTATATGATGGTGATTGGAAGAATAATAAAAGATGTGGA
TTCGGAACTTTGAGTATCCCCAATGGAAATGAAGAGGGTGAATATAAGAA
AGTGTATGCTGGAGGTTGGAAGAATGATAAACGACATGGTCACGGTACGA
ATTATTACACATTGACAGAATATTATGAAGGAGAATGGTATCTCAATAAA
CGAAGTGGATGGGGAAGAATGTATTATGCTGATGGAAGTATTTATGAAGG
CGAATGGCTGGAAGATAAACGTAATGGTCACGGCATGCTTCGGCTAACTG
ATGAGAATCGTTACGAGGGACAGTGGAAAGATGGTATGAAACACGGTGAA
GGCAAATTCTATCATTATAACAAAGGTCAAGTCTTTTTGGGTACTTGGCT
CAATGATGTCGCTAAATGTGGCACCATGGAAGACTTCAATCGTGAAACTG
CAATTGATGCTACTAAATACCCACTCCCTGAGctcGAGCTTGAAGATCCA
AAAGATGTATTAGGAAATGCCAATGAAAGTCTTCAAGATTTTCTATGAAT
TTTGAATCATTTCTTTTTCCCtaaattatcaatttttatccaaacgcaat
ttttaaattctctttgccccctgatttttgtaaatatttttgtgtgaaTT
TCTTTTGAATCATGCCATAGACACCTCCAAAATTTTgtacaataattttt
tttgaatttttatcacCGTTTTTATTGAACCGAAAAAtatatcgaaaaaa
aaatcaaaaaaatcaaagacaTCAA
Run BLAST on NCBI

protein sequence of TCONS_00026385-protein

>TCONS_00026385-protein ID=TCONS_00026385-protein|Name=TCONS_00026385-protein|organism=Clytia hemisphaerica|type=polypeptide|length=238bp
MPFVKSPKQNQPLWKEWDRRAQKEGQLNTFYSVNGDHYTGEWHNNTKHGK
GAQFWKKTGALYDGDWKNNKRCGFGTLSIPNGNEEGEYKKVYAGGWKNDK
RHGHGTNYYTLTEYYEGEWYLNKRSGWGRMYYADGSIYEGEWLEDKRNGH
GMLRLTDENRYEGQWKDGMKHGEGKFYHYNKGQVFLGTWLNDVAKCGTME
DFNRETAIDATKYPLPELELEDPKDVLGNANESLQDFL
Run BLAST on NCBI

transcript from alignment at sc0000570:79935..86577-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026385 ID=TCONS_00026385|Name=TCONS_00026385|organism=Clytia hemisphaerica|type=transcript|length=6643bp|location=Sequence derived from alignment at sc0000570:79935..86577- (Clytia hemisphaerica)
GTCTGGATAGATTCGGGATTACTCTCCCGTTTCCTAGGTTACGTTTACAA
ACATGGTAGACGTAAACATTCGAAATTTTTTGCACGAAACGTGGGCAAAA
AAGGAGATGAAAATGGTTCTGTGGCTGAAAAAAGATTAACTTTGAAACAC
TTTTTGTGTTGTCGTACTAAAACATACTCTAATATGAATTTAAATTCTTT
TGAGATTTGATTACTAAACAAGCAAAGGTAAGATTATCCTAAAATAGACC
TTTTTTTAAAGAGGCAACCCTGTTGAATAATTATGTAGTCCAGCATAAAA
CAATGATACAGCCATGCATAATTACTGTTTCATGCTTATCATAATAATTA
TGCATGGCTATACCATTGTTTTTTTGTTGGACTACATAATTACTCAACAG
GGTGGCCTCATTAAAAAAAGGTCTATTGAACTGTTATGTTAGGCTCTTTT
TTCAGTTTGGGATGGCTTCATCACAAAGGTTTTTCATCTTTGTTTGTTGC
TGCTCTGCAGGATAAACTTTTCTAAGTTAAGGCTTTTTCAGAAATTCAGG
CAATTGAACGCAATTGAACACTCTGTTGTTGTTGGTTGAACACGCTTGCT
GTATTCCCCCTCTCGCACGGTACTCACTCATGCGCTCTCGCTCTCATCTG
ACTTTCCATTCCGATGCCGTATTGGCAGCCGTCCACGCTAAAGCTCTAAA
GGAGTTGGTCAATTTAATTGCAATCAAACTTATCGAACATATTTGAATAT
AAATGAAGTGTAAAGTAATTGACAATTTGTTTGGGAGAACTTTTTGAATA
ATAACTAATTACTCCAGCAAATTTTCTCCAAAAAATTTATGTTGCAAATT
TTTAGCTACTTTTTTTAGCACAATGCCATTTGTCAAATCACCCAAACAAA
ACCAACCATTATGGAAAGAATGGGATCGTAGAGCACAAAAAGAAGGTCAA
CTGAATACTTTCTATTCAGTGAATGGTGACCATTACACTGGTGAATGGCA
CAATAATACTAAACATGGTAAGACTTCGATAACATTATGTTCTTATCTTG
AAAAATAATAGACTGAAATTTGGCATAGAGGTTCCTTATTAGTCGAAGAA
CCACCAAAAAACTTGCATTCTATAAAAGATTTGTTGTTCTAAAGATATGA
CCAATTATAAAGAATGTGTCAAGGAAAGTATACAAGAAAGGTGTATACAC
ATAACTTTATGCCTAATTTTTCCTTCAGACTAACTTAATGACATTTTTAA
AAATAACTCCAGTTAAAATTATTTTGACCTATGCAACTACATGTTTTTTC
TTTTATAAGCATAACGTTTATAAGCATATGCAGGCTCAGTTTTAGGTACC
TAAACAATGGCTCTATTGTTTGAGGACAATAGAATGCTAAGCATAATGCG
AGCCTGATATAGGGGTAGACACTTGCTTATAAAAAAAAAACATGTAATAA
CTTGATTTTTGTTTTCGTTCTTGATTTGAGACGGTTAACATTTTATGATT
GAAAGTTAACTCTATAAGTGATTCATCATAAGATTTGAGCTTAAATTTGT
CACTGTATACACGTTTTTTTATAAGAATTTTCATCCAAAATTTTTGACGC
CTTCGGATGTTCTTTTAAAACTTTTTGAGTTTTAAGCCTAAAAATGTTCT
TAACATGTTCTTATTTTGACCATTATTCGAGTATTTTTTGTCTATTTTCC
TATGAAATCTGGTGTTTTAGATTCCACAGGGGGTGTCATGCAGTTGGTAC
CAGACATCATGACGGTTAGTACCGTGGCGGGTCATGTTTGATTTTTAGAA
TTTGCAGTTAGTACCTTGTGGGTGCTAACTGCTGTAAAGGATGGTCTACT
ATAAATTTTAAGTCAAACAAATGGTACTTTTAGGGTACTAACTGCTATGA
GAGGTGGTGTGATATAAATTTTAACTCAATCAAATGGTACTTTTACGGTA
CAAAATGCTTTGAAAGGTTGTGTACTGTAATATAAATTTTAAGTCAATCA
AGTGGTACTTTTAGGGTACAAAATGCTTTGAAAGGTGGTGTACTGTAATA
TAAATTTTAACTCAATCAAATGGTACTTTTACCGTACAAAATGCTATGAG
AGGTGGTGTGATATAAATTTTAACTCAATCAAATGGTACTTTTACCGTAC
AAAATGCTATGAGAGGTGGTGTGATATAAATTTCAACTCAATCGAATGGT
ACTTTTACGGTACAAAATGCTTTGAGAGGTGGTGTGATATAAATTTCAAC
TCAATCAAATGGTACTTTTACGGTACAAAATGCTTTGAGAGGTGGTGTGA
TATAAATTTCAACTCAATCAAATGGTACTTTTACGGTACAAAATGCTTTG
AGAGGTGGTGTGATATAAATTTCAACTCAATCAAATGGTACTTTTACGGT
ACAAAATGCTTTGATTTGAGAGGTGGTGTGATATAAATTTCAACTCAATC
AAATGGTACTTTTACGGTACAAAATGCTATGAGAGGTGGTGTGATATAAA
TTTCAACTCAATCAAATGGTACTTTTACGGTACAAAATGCTATGAGAGGT
GGTGTGATATAAATTTCAACTCAATCAAATGGTACTTTTACGGTACAAAA
TGCTATGAGAGGTGGTGTGATATAAATTTCAACTCAATCAAATGGTACTT
TTACGGTACAAAATGCTATGAGAGGTGGTGTGATATAAATTTCAACTCAA
TCAAATGGTACTTTTACGGTACAAAATGCTATGAGAGGTGGTGTGATATA
AATTTCAACTCAATCAAATGGTACTTTTACGGTACAAAATGCTTTGATAG
GTGGTGTACTGTAATATAAATTTTAAGTCAATCAAGTGGTACTATTAGGG
TACTAACTGCTGAAAATAGCTTTTATTTAGACTTTATTTGTTAGACTTTA
TTTGTTTTACTTTCTGGACTTACCAATCAAATCTTAAATCCCATGTCAAA
GATTGCTTCTTTTGATATTGTGTAGAGCTATTTAAAGTATGTCATTATGA
TATACGTTATGTTATGTTCGTCAGCAGTTTTTTGTTTTTATTTAACTGCA
AATGTCTTCTCTAGCGCAAAATTTTTCGCTACAAAAGTGACGTTTTTATT
TCTGGGGCTTTAGACCTAATATTTTTGGGCTTTTTACTTCACATGTTGGG
TTTTGTAGCTTTGTACCATTTGTTTTGGGCTTCATATTTATCATAAATCA
AATAGAGAAAAATTATCAATCCCAGGGCTGCCTAGAGTACTAACTGGTTT
CCAATAACCTTGACTACCTTGAGTGCCAGTCAATCTTGACCGCTAAACAG
GGCAGAAAAGGGGGTGGTGTCAACCTGTCAATAGTCGAATGCACTTGGTA
CTTTTTGGATAATAAGTGCGAATAGAGGTGGTGTCAACCTGTCAATAGTC
AAAATCACTTAGTACTATGGGGTACTAACTGCTGAGGGGTCGTGGGTGTA
CTTCCAAATTTTTAAATTTGCATTTAGTCATCATGATATCTGGTGCCAAC
TGCATGATCTCCCTTTGGTCTGCAAAGCCTTGAAATGTTCTTAACTTGTT
CTGAACATTTTGGCCATCGAAGCCTTGTGTTATTTATAGTTTGTTCTTAT
AACAAAAACGTGTATACAAGATACTGCAAGATACTGAAACTATCCTATTT
AACTTTTAAAGGGAAAGGAGCTCAATTTTGGAAGAAGACAGGAGCATTAT
ATGATGGTGATTGGAAGAATAATAAAAGATGTGGATTCGGAACTTTGAGT
ATCCCCAATGGAAATGAAGAGGGTGAATATAAGAAAGTGTATGCTGGAGG
TTGGAAGAATGATAAACGACATGTAAGTGGTGGAAATAAAGGGGGGACTG
ATCTCTAACTACTTGAATGGATCGAGCTACCCGTATAATGGAAGCGTGTC
CAGTTTTAGAGATGACTAGTCCACCATCTTGTTTTCAATTCTAGTTGTTA
ACAGCACGATTTGAATGTTTTGAATTCGAACTTTCGAAAATCTAAGGTAA
AATTGGAAAACGAACTAGTTGACAGCGGACTAGTTGACTTCAAAATCTGT
GAGCAGTTAGCCTATCTAGAGTGTAAAATAATTTCAAATTTAATGAGGGA
AAATATATCTTCATCTGTATTCTTTATGTAAATGGGTACACCTTATTAGA
ATCATTTAATCTCGACATTTTTCAAAAATGCTTTAAATGTAGAGTTCAAT
CTCAAAGCGAGAGTGAGCAGGACTAGGAACTTCTTTTTAAATCAATGAAA
TGAATACCTTCTCATTTTCATTTGTAATATATTTTTGTTGGTAAGGTCAA
AAAGTGGCATCCTGATAAAAGAGAGCCAAGTTCTTGCAAGACAAAACTAA
GATACATTTTAAAGTAATTTTGAGTGAGATATCGCCATGTTGTTTAATTA
GACAAAGCATAGTCACTATAAAACACTCCGGTCTGGCAGTGTATTGTTTT
AGCCTTTTGTCCAATTTTCTTTTCTTACAAACAAAAGGGAAGTTGCGATT
TTCATACTTTTTGATCACGTTACTAAAATCTCTTCTTGGGATTGGTCTAT
TTTCTAATCACATGATCAAAAAGTTTGCAAAATAAATAGATTTTGGTACG
TAAGCTCCATCTTTTAACAATAAAAAGAGACAAAAGCCTTCCAGACCAGT
GTTTTTATAATGACTATGGACAAAGTAAAAATTGTATTTCACAAGATGAA
AAGCTTTTTGGTTTACGCCATCATCAAAGCAAAGTAAAGTAATCTTGTCG
ATTCATTTCAGGGTCACGGTACGAATTATTACACATTGACAGAATATTAT
GAAGGAGAATGGTATCTCAATAAACGAAGTGGATGGGGAAGAATGTATTA
TGCTGATGGAAGTATTTATGAAGGCGAATGGCTGGAAGATAAACGTAATG
GTCACGGCATGCTTCGGCTAAGTAAGTCTCTTTCATTTTTCTGTTGCACA
GCCGCCTTTCCCGCGTTCGGCTATTTAGCGGGCTGGTAATTAATTCGAGG
AAATGACGTCAAAAACCCTTTTGTTTGAGAATATGACTGCAACGACTTCA
GGCATTTTGACGTCATTCCTCCCTGGTGAAATTGAACCCAGTCTCCTCAT
GCTTTAAAGGTTGATAGGTGTATATGAAGTGGTTCCCCTTATCTCAGAAT
TCTAACAAACGAGCAGAAAATAATAAATATGTTTGACCGAGTGTAAAATT
ATTGAATTTTTGTCAAAAGCTCGTCTACTATGGAGTAAAGTAGAGAAACG
TGATTTGAGCAAATGTGCTTGTCAAACATTTAGGTTATTAAACAATCCAT
GATATGAAATGTATAGCTCGAAAATCATAAGAACCCAAAAAGTAGCAATG
TCTTTTGCTCGATACATAACTACTATTAACCCTACCACATATATGCTGTG
GGACCTCCTCCATGTGGGAGTTTTTCAGAGATATGTTCACTGATATATTT
TTTTCACGATTCATAATTTAATTTTCACTTGACAGCTGATGAGAATCGTT
ACGAGGGACAGTGGAAAGATGGTATGAAACACGGTGAAGGCAAATTCTAT
CATTATAACAAAGGTCAAGTCTTTTTGGGTACTTGGCTCAATGATGTCGC
TAAATGTGGCACCATGGAAGACTTCAATCGTGAAACTGCAATTGATGCTA
CTAAATACCCACTCCCTGAGGTACCTCACTATCCTCACTATCCTTTTTGT
TTTGCATAGAAAGTACAATTCTTGATATGCACCATTGCAATGTCTTCTAA
CATTGCATCACGAACCCAAAAGATGGGGGGAGCGTACGGTATTTCGAAAT
TTCGGAAATCGGACAAAATTCCTTCGGTATTTCGGAATGCTGATATTGTC
TCGGTATCGGAAATCTATGAATTTTTGCTTCGGAATTTCGGTACTATAAA
TTTTTTATCCCCCTTTTTCGGAATTCATACATGAAAAATCAAATTTGATG
AAAAATTAGTCAAAACGAGGAAAAATAATTTTTCTTGGTGCATTGGGTCT
TGGCTGGCATGAACAGTGCCATTGTTTCAGATTATTAGTTAGAGCCTCTA
AAAAGTTTAACATTTTTCATCACTTTTTTCNAATATTTTTTCTTGGCTGA
CATGAACAGTGCCATCGTTTCAGATTATTAATTAGAGCCTCTAAAAAGGT
TAACATTTTCATCACTTTTTTCATGAAAAAGTCATTTTTTTATTAAACAA
TATTCATCCGTGGGAAAAACTTGGACCTCTCCAACTATATTTAAACCTAA
AAATCATCCTTTTTAAGTTATAAATGCTTATTTTCTCTACATAAGTCAAT
CTTCACTGCTTGATTGTTTAACTCGTTTTTCTTATATTTTTTTTTTTTAG
CTCGAGCTTGAAGATCCAAAAGATGTATTAGGAAATGCCAATGAAAGTCT
TCAAGATTTTCTATGAATTTTGAATCATTTCTTTTTCCCTAAATTATCAA
TTTTTATCCAAACGCAATTTTTAAATTCTCTTTGCCCCCTGATTTTTGTA
AATATTTTTGTGTGAATTTCTTTTGAATCATGCCATAGACACCTCCAAAA
TTTTGTACAATAATTTTTTTTGAATTTTTATCACCGTTTTTATTGAACCG
AAAAATATATCGAAAAAAAAATCAAAAAAATCAAAGACATCAA

Coding sequence (CDS) from alignment at sc0000570:79935..86577-

>TCONS_00026385 ID=TCONS_00026385|Name=TCONS_00026385|organism=Clytia hemisphaerica|type=CDS|length=3585bp|location=Sequence derived from alignment at sc0000570:79935..86577- (Clytia hemisphaerica)
CTCGAGCTTGAAGATCCAAAAGATGTATTAGGAAATGCCAATGAAAGTCT
TCAAGATTTTCTATGACTGATGAGAATCGTTACGAGGGACAGTGGAAAGA
TGGTATGAAACACGGTGAAGGCAAATTCTATCATTATAACAAAGGTCAAG
TCTTTTTGGGTACTTGGCTCAATGATGTCGCTAAATGTGGCACCATGGAA
GACTTCAATCGTGAAACTGCAATTGATGCTACTAAATACCCACTCCCTGA
GGGTCACGGTACGAATTATTACACATTGACAGAATATTATGAAGGAGAAT
GGTATCTCAATAAACGAAGTGGATGGGGAAGAATGTATTATGCTGATGGA
AGTATTTATGAAGGCGAATGGCTGGAAGATAAACGTAATGGTCACGGCAT
GCTTCGGCTAAGGAAAGGAGCTCAATTTTGGAAGAAGACAGGAGCATTAT
ATGATGGTGATTGGAAGAATAATAAAAGATGTGGATTCGGAACTTTGAGT
ATCCCCAATGGAAATGAAGAGGGTGAATATAAGAAAGTGTATGCTGGAGG
TTGGAAGAATGATAAACGACATATGCCATTTGTCAAATCACCCAAACAAA
ACCAACCATTATGGAAAGAATGGGATCGTAGAGCACAAAAAGAAGGTCAA
CTGAATACTTTCTATTCAGTGAATGGTGACCATTACACTGGTGAATGGCA
CAATAATACTAAACATGCTCGAGCTTGAAGATCCAAAAGATGTATTAGGA
AATGCCAATGAAAGTCTTCAAGATTTTCTATGACTGATGAGAATCGTTAC
GAGGGACAGTGGAAAGATGGTATGAAACACGGTGAAGGCAAATTCTATCA
TTATAACAAAGGTCAAGTCTTTTTGGGTACTTGGCTCAATGATGTCGCTA
AATGTGGCACCATGGAAGACTTCAATCGTGAAACTGCAATTGATGCTACT
AAATACCCACTCCCTGAGGGTCACGGTACGAATTATTACACATTGACAGA
ATATTATGAAGGAGAATGGTATCTCAATAAACGAAGTGGATGGGGAAGAA
TGTATTATGCTGATGGAAGTATTTATGAAGGCGAATGGCTGGAAGATAAA
CGTAATGGTCACGGCATGCTTCGGCTAAGGAAAGGAGCTCAATTTTGGAA
GAAGACAGGAGCATTATATGATGGTGATTGGAAGAATAATAAAAGATGTG
GATTCGGAACTTTGAGTATCCCCAATGGAAATGAAGAGGGTGAATATAAG
AAAGTGTATGCTGGAGGTTGGAAGAATGATAAACGACATATGCCATTTGT
CAAATCACCCAAACAAAACCAACCATTATGGAAAGAATGGGATCGTAGAG
CACAAAAAGAAGGTCAACTGAATACTTTCTATTCAGTGAATGGTGACCAT
TACACTGGTGAATGGCACAATAATACTAAACATGCTCGAGCTTGAAGATC
CAAAAGATGTATTAGGAAATGCCAATGAAAGTCTTCAAGATTTTCTATGA
CTGATGAGAATCGTTACGAGGGACAGTGGAAAGATGGTATGAAACACGGT
GAAGGCAAATTCTATCATTATAACAAAGGTCAAGTCTTTTTGGGTACTTG
GCTCAATGATGTCGCTAAATGTGGCACCATGGAAGACTTCAATCGTGAAA
CTGCAATTGATGCTACTAAATACCCACTCCCTGAGGGTCACGGTACGAAT
TATTACACATTGACAGAATATTATGAAGGAGAATGGTATCTCAATAAACG
AAGTGGATGGGGAAGAATGTATTATGCTGATGGAAGTATTTATGAAGGCG
AATGGCTGGAAGATAAACGTAATGGTCACGGCATGCTTCGGCTAAGGAAA
GGAGCTCAATTTTGGAAGAAGACAGGAGCATTATATGATGGTGATTGGAA
GAATAATAAAAGATGTGGATTCGGAACTTTGAGTATCCCCAATGGAAATG
AAGAGGGTGAATATAAGAAAGTGTATGCTGGAGGTTGGAAGAATGATAAA
CGACATATGCCATTTGTCAAATCACCCAAACAAAACCAACCATTATGGAA
AGAATGGGATCGTAGAGCACAAAAAGAAGGTCAACTGAATACTTTCTATT
CAGTGAATGGTGACCATTACACTGGTGAATGGCACAATAATACTAAACAT
GCTCGAGCTTGAAGATCCAAAAGATGTATTAGGAAATGCCAATGAAAGTC
TTCAAGATTTTCTATGACTGATGAGAATCGTTACGAGGGACAGTGGAAAG
ATGGTATGAAACACGGTGAAGGCAAATTCTATCATTATAACAAAGGTCAA
GTCTTTTTGGGTACTTGGCTCAATGATGTCGCTAAATGTGGCACCATGGA
AGACTTCAATCGTGAAACTGCAATTGATGCTACTAAATACCCACTCCCTG
AGGGTCACGGTACGAATTATTACACATTGACAGAATATTATGAAGGAGAA
TGGTATCTCAATAAACGAAGTGGATGGGGAAGAATGTATTATGCTGATGG
AAGTATTTATGAAGGCGAATGGCTGGAAGATAAACGTAATGGTCACGGCA
TGCTTCGGCTAAGGAAAGGAGCTCAATTTTGGAAGAAGACAGGAGCATTA
TATGATGGTGATTGGAAGAATAATAAAAGATGTGGATTCGGAACTTTGAG
TATCCCCAATGGAAATGAAGAGGGTGAATATAAGAAAGTGTATGCTGGAG
GTTGGAAGAATGATAAACGACATATGCCATTTGTCAAATCACCCAAACAA
AACCAACCATTATGGAAAGAATGGGATCGTAGAGCACAAAAAGAAGGTCA
ACTGAATACTTTCTATTCAGTGAATGGTGACCATTACACTGGTGAATGGC
ACAATAATACTAAACATGCTCGAGCTTGAAGATCCAAAAGATGTATTAGG
AAATGCCAATGAAAGTCTTCAAGATTTTCTATGACTGATGAGAATCGTTA
CGAGGGACAGTGGAAAGATGGTATGAAACACGGTGAAGGCAAATTCTATC
ATTATAACAAAGGTCAAGTCTTTTTGGGTACTTGGCTCAATGATGTCGCT
AAATGTGGCACCATGGAAGACTTCAATCGTGAAACTGCAATTGATGCTAC
TAAATACCCACTCCCTGAGGGTCACGGTACGAATTATTACACATTGACAG
AATATTATGAAGGAGAATGGTATCTCAATAAACGAAGTGGATGGGGAAGA
ATGTATTATGCTGATGGAAGTATTTATGAAGGCGAATGGCTGGAAGATAA
ACGTAATGGTCACGGCATGCTTCGGCTAAGGAAAGGAGCTCAATTTTGGA
AGAAGACAGGAGCATTATATGATGGTGATTGGAAGAATAATAAAAGATGT
GGATTCGGAACTTTGAGTATCCCCAATGGAAATGAAGAGGGTGAATATAA
GAAAGTGTATGCTGGAGGTTGGAAGAATGATAAACGACATATGCCATTTG
TCAAATCACCCAAACAAAACCAACCATTATGGAAAGAATGGGATCGTAGA
GCACAAAAAGAAGGTCAACTGAATACTTTCTATTCAGTGAATGGTGACCA
TTACACTGGTGAATGGCACAATAATACTAAACATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014814XLOC_014814Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026385-exon-sc0000570-1575043694:86351..86577TCONS_00026385-exon-sc0000570-1575043694:86351..86577Clytia hemisphaericaexon
TCONS_00026385-exon-sc0000570-1575043694:85561..85709TCONS_00026385-exon-sc0000570-1575043694:85561..85709Clytia hemisphaericaexon
TCONS_00026385-exon-sc0000570-1575043694:82756..82916TCONS_00026385-exon-sc0000570-1575043694:82756..82916Clytia hemisphaericaexon
TCONS_00026385-exon-sc0000570-1575043694:81657..81816TCONS_00026385-exon-sc0000570-1575043694:81657..81816Clytia hemisphaericaexon
TCONS_00026385-exon-sc0000570-1575043694:80908..81092TCONS_00026385-exon-sc0000570-1575043694:80908..81092Clytia hemisphaericaexon
TCONS_00026385-exon-sc0000570-1575043694:79935..80227TCONS_00026385-exon-sc0000570-1575043694:79935..80227Clytia hemisphaericaexon
TCONS_00026385-exon-sc0000570-1510915933:86351..86577TCONS_00026385-exon-sc0000570-1510915933:86351..86577Clytia hemisphaericaexon
TCONS_00026385-exon-sc0000570-1510915933:85561..85709TCONS_00026385-exon-sc0000570-1510915933:85561..85709Clytia hemisphaericaexon
TCONS_00026385-exon-sc0000570-1510915933:82756..82916TCONS_00026385-exon-sc0000570-1510915933:82756..82916Clytia hemisphaericaexon
TCONS_00026385-exon-sc0000570-1510915933:81657..81816TCONS_00026385-exon-sc0000570-1510915933:81657..81816Clytia hemisphaericaexon
TCONS_00026385-exon-sc0000570-1510915933:80908..81092TCONS_00026385-exon-sc0000570-1510915933:80908..81092Clytia hemisphaericaexon
TCONS_00026385-exon-sc0000570-1510915933:79935..80227TCONS_00026385-exon-sc0000570-1510915933:79935..80227Clytia hemisphaericaexon
TCONS_00026385-exon-sc0000570-1491911889:86351..86577TCONS_00026385-exon-sc0000570-1491911889:86351..86577Clytia hemisphaericaexon
TCONS_00026385-exon-sc0000570-1491911889:85561..85709TCONS_00026385-exon-sc0000570-1491911889:85561..85709Clytia hemisphaericaexon
TCONS_00026385-exon-sc0000570-1491911889:82756..82916TCONS_00026385-exon-sc0000570-1491911889:82756..82916Clytia hemisphaericaexon
TCONS_00026385-exon-sc0000570-1491911889:81657..81816TCONS_00026385-exon-sc0000570-1491911889:81657..81816Clytia hemisphaericaexon
TCONS_00026385-exon-sc0000570-1491911889:80908..81092TCONS_00026385-exon-sc0000570-1491911889:80908..81092Clytia hemisphaericaexon
TCONS_00026385-exon-sc0000570-1491911889:79935..80227TCONS_00026385-exon-sc0000570-1491911889:79935..80227Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026385-proteinTCONS_00026385-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000570supercontigsc0000570:79935..86577 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.0243	17.0833	76.5553	89.6654	288.647	207.428	111.953	117.098	88.3584	90.8921	144.147	147.687	25.4515	26.0765	17.0173	14.3904	8.16084	9.24062	50.48	41.8341	17.3285	17.8224	18.023	15.2753	29.5737	26.9217	36.8126	50.5201	7.41895	7.14343
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003409MORN
Blast
[Close]
BLAST of TCONS_00026385 vs. Swiss-Prot (Human)
Match: MORN3 (MORN repeat-containing protein 3 OS=Homo sapiens GN=MORN3 PE=1 SV=2)

HSP 1 Score: 270.011 bits (689), Expect = 6.027e-88
Identity = 125/230 (54.35%), Postives = 173/230 (75.22%), Query Frame = 1 
Query:  232 MPFVKSPKQNQPLWKEWDRRAQKEGQLNTFYSVNGDHYTGEWHNNTKHGKGAQFWKKTGALYDGDWKNNKRCGFGTLSIPNGNEEGEYKKVYAGGWKNDKRHGHGTNYYTLTEYYEGEWYLNKRSGWGRMYYADGSIYEGEWLEDKRNGHGMLRLTDENRYEGQWKDGMKHGEGKFYHYNKGQVFLGTWLNDVAKCGTMEDFNRETAIDATKYPLPELELEDPKDVLGNA 921
            MP  K PK+++ LWK WDR+AQ+ G  +  Y+VNGD+Y GEW +N KHGKG Q WKK GA+Y+GDWK  KR G+GTLS+P+  + G+ ++VY+G WK DK+ G+G  ++   EYYEG+W  ++RSGWGRMYY++G IYEG+W  DK NG GMLRL + NRYEG W+ GMK+G G+F+H + GQ+F G W++++AKCGTM DF R+ A + T++P+PE+++ DP  VL  A
Sbjct:    1 MPVSKCPKKSESLWKGWDRKAQRNGLRSQVYAVNGDYYVGEWKDNVKHGKGTQVWKKKGAIYEGDWKFGKRDGYGTLSLPD-QQTGKCRRVYSGWWKGDKKSGYGIQFFGPKEYYEGDWCGSQRSGWGRMYYSNGDIYEGQWENDKPNGEGMLRLKNGNRYEGCWERGMKNGAGRFFHLDHGQLFEGFWVDNMAKCGTMIDFGRDEAPEPTQFPIPEVKILDPDGVLAEA 229
The following BLAST results are available for this feature:
BLAST of TCONS_00026385 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MORN36.027e-8854.35MORN repeat-containing protein 3 OS=Homo sapiens G... [more]
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