TCONS_00026127 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00026127
Unique Name	TCONS_00026127
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3635

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000563:138961..153013+
coding sequence from alignment at sc0000563:138961..153013+

transcript sequence

>TCONS_00026127 ID=TCONS_00026127|Name=TCONS_00026127|organism=Clytia hemisphaerica|type=transcript|length=3635bp
CAGATTTGATTGACAACCCTGAGATGTGAAGACGAAAACATGTGTTTTTG
CGGGTCTGTAAAGTGTTTAAATAATCAATGCTCCACTGGCGAACACAAAC
ACACACACTTGATCGAAAAATTTGGAAGGAGTTCTAGTAATTTTGGAAAA
CAAACCTTCATTTTTAACTGACAAAGATGCATTTCATTTCACTTTGTTCA
ATCCTGATAGCTGTTTTCCCAATGGTGAAAAACCAGCAGTCTCGTCATTC
TTGCAAGAAAGTTGACCCAACTAATGCTGAATGTCTACAAGACATCAATA
AATGTTCCAACGTTACTTGTGAAGAAGATGATAATCACTGTATGACTGTT
TACAAACTTGAGAAAGGTCGCTTTGTACCCTTCTTCGGTGGATGTTTTGG
AACACCTCACGACCAGTCAACTACTTCCCATAACAAGTGTGTATTGTATC
AAAGAAACCCTCACTACCCTACCCACTATGATTGCTTTTGCTCAGGTTCC
TTTTGCAATGCAAATATCATTTTTCCGCAGATCAAGTCTACCACAGAACA
ACCAGTGAGAAACACGACAAAAGCACTTTCCAGTTTGCAGCCCACTCAAC
GTACCGACTCTTCCGAGAAACTATATCTTTATTATATCCCGGCATCGATC
TTCCTAATGACTATGGTTCTTGGTGTTGCTCTATTCTTTTGGATAAAACG
AAAACGCCGTCGCCGGAATAGCCATGAAACCCTGCTGACAGAATTTAACA
CGACCATGACGCAACCGAAAACCTATCCAGCGTCTTTTCTCGAGATCATT
CACCAAGGACAAATGAACACTATCTGGAAAGCTACTTTTTGTCAGCGAGC
GGCTGCCATCAAAATTGTTAATAAGCTTGACGTGACCCAATGGGTCAAcg
agaaagatatttttctcaatCATAAACTTAAACATGATAATGTTGTAAAT
TTTATATCAGCCGAGAGACGTTTTAAAGAGACGACTGTCCAATACTGGAT
CGTTACTGAGTACCACGAAAAAGGTTCATTAGCGAACTACTtattgaaga
atattttatccAAAGAAACATTCTTGAGAATGCTATATAGTACAGTTAAA
GGACTTGTATATTTACATTCGAATAGTAAAATGAAGCCCATGGTAGCTCA
CAGAGACTTGAAACCAGCAAATGTTTTGGTGAAGGCCGATTTATCGTGTT
GTATATGTGATCTTGGTCTCGCTTTACCTCTGCCTGAAAATATTGACGTC
TCCAGAGAACTCTGTCAAGCTGGAACAAAGCGTTATATGGCGCCAGAAAT
TTTACAAGGAGCAGTCACATTTTATCAAGAATCCTTCTTGAGGGCGGATA
TGTATTCGATGGGTCTTCTATTCTGGGATTTGCTCTCTCGCACCAAGATA
GATGAATCTATAGAAGTTGAGGAATACAAACCGCCGTATTCAGGACTGGT
GAATTTCAATCCGAGTGTAGATGAAATGTTGAAATGTGTTGTTGAAAATC
ACAAGCGACCTCATATCCCAAACCATTGGAAGGAAACACAGTCCTTTGTG
ACGATCGTTGAAACAATGGAACTGTGTTGGGACGACGATGCTGACGCTCG
TCTGACGTCACAATGTGTCGCTCAACGAATCAGAAGACTTATTCATTCAC
CGCCCGATAACACATTCCAATCGCACGCCCTTGAGCAGCTCAAAGAGGGT
GAGAAGGAGAACTCGCAGAGTAGTAGTATTAGTTCAAATTCAGCACTTTT
GTGGGATAATTCGTCTACGAGGAAAGACTGTACATCCAACAAAAGCATAG
GTAGCTATTCAACGACAGACGACCATAGTCAATATTCCTTATCATCTTCC
TCCAATACTGTACTAACGAAATGTAACGCTTGAATTGAGCGTGGCGCACG
TGTATAAGTCGCTTGATTTGTCCTGTTAAATAAATATCGAAGTGGGTTCA
ATTTCCTGCTGACTTGctctcaaaatctaagtttcggAAAATATACTCTC
TTCTCAAGAAACTAACAGCATCGGgtgtcgttttcaaaatattattgttC
GACATTGTACTCATTGTTTGAAAGCGTTTACGTTTTTATTTCTCAATCAA
TATGATATTCTATGAGCTGATTTTAAAAACGAGGCCCTTAACGCTTTTTT
GCATCTCTTTGAGAACCGGATGTGTTGACCATACACTTATCTTGCAAAGA
GTTTGTGAAAATTCTGgataattattcaaaaaactAGCGTGGCGATTTAC
ATGACAAATTTGTACATTCTATTATATACTATATACTATTACATTATACT
TTATATACTACTGTATACTATACTTATATAACATATATGAAATCGTATTT
ATTCACCGTACATTAGTACTTCGGGCATGCTCAGTACGCATCTCATAGGT
TTAAGTAACAGGACGAACAAATTTCTCAATTACAAAAATATCTAGAAAGA
GGAAGGCTATTTTTTACGTCGGGTGTGAAAAGAGCATGTCTGAAGCCTTT
ATTTTCAGTTATTTAGAAATCCTATGAAAGCATTTCTTTGCTACTACGAT
AGTACACACACTAgaacaaattttggttaaaacacgcttattttagcttt
ttgtaATTTGATCCGTCCGTTTTTAGTtggaaagtaaatttttttcgtga
tatccatgacgtaatgttttatacggaaacactaAAGAAAACGGGGGTTT
GTgccactagttttattgttCATAAATTCAAAACTAGTGGCAAAACACGT
GCATCTTTTTAGTGTTTCCGTATGAAAGTACCATCATGgttttcaaagtt
caaagaAATGCTTTCAAACATCATGTAAATATGATTTTTAGTTTAGTTAC
TACTCGAATCTTTTTCACGATTCTCAGGTTAATCAATTCGTTCGTTGTGG
TGACAGGATCCACTTTGAAATTGTTAGGGCCATGATATGCCGACTAAAGT
GGCGCCGACGGGCAAAAGGATCTTTTTTAAGGGATGAATACGGAATTTGG
TACTAATGTTAGTTAATGTTAATGTAATGACAATGAAACCTTTCTTATTG
TTGAATTTTGAATAGAGGAAAATGCagaggtttttttttaaatcttgctt
tTCACAATAACAGCCAAAATCAATATTCTCAAACACTATTCTTGTGATAA
TGAGTACTTTTTGTCACCACACCACGGCAACGACAAAGATTGATAACTCG
TTATTCATGGTATTCAAGGCGttatcttttatacggaagaaCCCAAAACA
CTAAGCGTTTGCCACCAGTTCCAATTTCCAGACTCATCCAAGATTCATCT
TTTCAAAAGATGTCAGCAAACGCAAAGTCGTCTTTGGGTCTCCCGTATGA
AATATTACGCCATGAATTATAGACTTGCAATGTACATATTCATTATACAA
AAgtgtatttttatgtttttatattttacccCCTCATTATATACATACAC
ATATTAATTATTGTTATATATCAGCATGGTTTAGAGAACCGTATTATCCA
AATATATCCCATATATAGGTTCGGTTACATCGTGCAATTAGTTTTACGTC
TATCCTCCATCTGAAAAATAACTTGACATTGACCAAGATGATAACGCTCC
GCGTAGCATACGTCATAATCATAGATTtattaaag

Run BLAST on NCBI

protein sequence of TCONS_00026127-protein

>TCONS_00026127-protein ID=TCONS_00026127-protein|Name=TCONS_00026127-protein|organism=Clytia hemisphaerica|type=polypeptide|length=568bp
MHFISLCSILIAVFPMVKNQQSRHSCKKVDPTNAECLQDINKCSNVTCEE
DDNHCMTVYKLEKGRFVPFFGGCFGTPHDQSTTSHNKCVLYQRNPHYPTH
YDCFCSGSFCNANIIFPQIKSTTEQPVRNTTKALSSLQPTQRTDSSEKLY
LYYIPASIFLMTMVLGVALFFWIKRKRRRRNSHETLLTEFNTTMTQPKTY
PASFLEIIHQGQMNTIWKATFCQRAAAIKIVNKLDVTQWVNEKDIFLNHK
LKHDNVVNFISAERRFKETTVQYWIVTEYHEKGSLANYLLKNILSKETFL
RMLYSTVKGLVYLHSNSKMKPMVAHRDLKPANVLVKADLSCCICDLGLAL
PLPENIDVSRELCQAGTKRYMAPEILQGAVTFYQESFLRADMYSMGLLFW
DLLSRTKIDESIEVEEYKPPYSGLVNFNPSVDEMLKCVVENHKRPHIPNH
WKETQSFVTIVETMELCWDDDADARLTSQCVAQRIRRLIHSPPDNTFQSH
ALEQLKEGEKENSQSSSISSNSALLWDNSSTRKDCTSNKSIGSYSTTDDH
SQYSLSSSSNTVLTKCNA

Run BLAST on NCBI

transcript from alignment at sc0000563:138961..153013+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00026127 ID=TCONS_00026127|Name=TCONS_00026127|organism=Clytia hemisphaerica|type=transcript|length=14053bp|location=Sequence derived from alignment at sc0000563:138961..153013+ (Clytia hemisphaerica)
CAGATTTGATTGACAACCCTGAGATGTGAAGACGAAAACATGTGTTTTTG
CGGGTCTGTAAAGTGTTTAAATAATCAATGCTCCACTGGCGAACACAAAC
ACACACACTTGATCGAAAAATTTGGAAGGAGTTCTAGTAATTTTGGAAAA
CAAACCTTCATTTTTAACTGACAAAGATGCATTTCATTTCACTTTGTTCA
ATCCTGATAGCTGGTAAGTCTTCATGGAAATATCTCACACCCCCTAATTT
TCGTATATCTACCTCGTATCCTCCACTCAGctaaaactgaaataaaaaag
gggAATACAATCATCCATGCCAGCCTCCTGTCAAGTTTACTATTTCCAAC
ACATCAGAGAGCAAACAAATGACTGCCTTTTCGTAGCCTAGATTCCcagg
atttttataaaattccttGCTTTTTAGTCAATTAAATGTATGCTTGCAGC
TAAAAATCTGCAGACTTTGGGTTTACAAACATTGGAAAGACAAATCTGTA
AAACAACAGAAAAGTATATATCCAGGCTAGCTTACTTTAAGTGCTCTTTC
TGATTTGGAACAGTAAAAAAAGGTGTCCTTctgcttttgttttgttttgt
gctAGTAGAGTTTTTGGGTTGCAGCAAAAAGCCTGATTGGTATTTCACTG
TAGGTGAAGCTATAAGTTTACAAACCCTGGTGACACACCGTGACTATCCA
GTGTCATTATTCTGGGGCTGAGAAAAATTATGTCAGATTAAACTCACTGT
TAGTTATGTtatcgtcaactgctctaacttgggacgattggtcgaaacat
gggacttatttatttatatctggcctgtattttcacttactgttaaatct
ctttgacaacaaatttgttttgatacttccaccaagtttatcaaccaCAC
TTTCTGTCATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTATCAACCacactt
tctgtcataacatgtcacgataactttcactgatagcgcaccctttttaa
ctttttgttttcattcaaaatgaccggacgctgatcggagaattagagaa
cgcccgcacCTAACCACCTATCGgctgatgggattaacaaataacgagtg
tgtaacttgccgcacaagtgacgtcaaacgctccattcagtgtgttccac
tacggatttttttcatttttcgatttaaaagcctacttggtgcgaaagag
aaatcgtgtacttttttaatacgccgttcattaaactcaaatcaaatgac
tttggaggttcggtgaaatggtgaccgaattgccgtcccatgttttgtca
gatagtcccaagttagagcagttgacgataCATTACAAGAAAAGCTTGAC
AACTGATAGAGTCAAAGGCAAACTCGACGGTCTGGGCTAAGTCCATTACA
GGGGGTGAACGATGGCGGAATTCCgaggcaaaatgtttttttgaaattcc
ttgatttccaatacaaaagcaattgaaactcctggatttccaatacaaag
tcaattttagggtagaaaaatctggaatttccgACAAATAATGCGGaatt
tccaagggttcaaataaaaaattgagcagAATTTCCAAAGtactttgaaa
aattgtctGGATTTCCCAGTGCTTTTTTATATCTGAAAATTCCTGTCGTT
CGTCCCctatatcaaattttttctggaagagccctaTAGTTGTTTGGGAA
AATGCGGCAGCCTTTTGACCAGTTCCGCAGTTCAACACTCATTCAGGCCA
GAAATTATCTGCTTCCTATTGCAGAAATAAAAACCCTAATACTCGAGCTA
ATTCTTCATTGGACATCACAAGAAGATTCACAGCGCTATGGCGTGCTaat
ttgaacaaaacttatATTATCTAGTTTCCTGCTTGTTTTACTTGCATCCA
CTGAAGTGTGGAGTAATTAAACCATTGCGTTCACCTTTATAAAGGAGTAT
TGCATAACTACTTACTTCGCATACTTCAGTGGATGCAAGGAAAACCAACG
CAGGAAATTAGATATAacattttataatttataacaGAATTTTTATTTGT
TCAAATTAGCATGCTAACATTCTCCCGGATTAGCAAGAGATAATGCTGCA
AACATTCCCAAGCGACATCCTATAAAATTATCAGGGTTTTATTTCCATAA
TACGGAGCACATAAGTTCCACTATTTCCTGAAGTAATTTAATATACGAAA
CTGAGTCAATAGGTTATTACAATCTACCAAACCACTATTGAATTAGCACA
CGATACATGTTGTAAATCTTCCTGATTTTAAACATAGAggataaaatgaa
ataaataagttaaaaacattagTACAGatatgtttttgagaagctGGTAA
AATGAGGTTTAGAAAGCACAAAAGTAGGTGTAGACTAAAGATTTTGAAGG
CCCATGAATGAGTAAAGACAAGAGcataaattgaattgaatatattttcg
ctgcaacgcAGCAGGATAACCCCATTACAAAAAAAGATAgctttctctaa
tacaatggggaacctagaagaaactgaaaaattgttacagaactaaagaa
aaaatgaataaaatgattatcataatattaataataacaacaaaataatg
aatatgaTATGAGCATGAATCTGGTAACGTGGCCCACTTTTCGATTTATT
ATTTTTCCTACTTTGAGGCCTTGCTGAAATCTCTATAGGTATATAGTCAT
ATCAAATCTTATTGTTTCGGGTCAATCTTGATATGGGCAAGCTTATaaac
agtcattttttcttATATAACAGGTACTCAAATTTTCCTAGAGGGggctt
tctttcaaaatgtgaacgaaaaataaggtttttaaaaaatgatcaaCTTC
ATTGTATAATAATTCATCAACAACATGCTTTTTCCAGCTTGGTTTTTGTT
TATCTCACAGCCAGaggatatgaaaaatgaaaaagtaagaGCCACAGGGG
GGGGCcaagcagttagtacagaaCACtatgtgtactaactgatttttgga
aaaatctgtaCCCCACCACCACCCCCTGTCACTTAGTACACCGTGTACTA
ACTGTCTTTGACCTCGCTCAATATATATACCACCCCCCAAAATAAGGATC
CGTCTCTCTACGGTGCATTCCAGGTGAATTTCACACCCCAGGGAGGTTTT
ATGAGgtgtattttatgtttttacctGTCTTCACCAGGTTTTTACCACTA
ACTActttcaaacaaataaaaatataacaaattatGGAGTAGGTCAACCA
CAGTGGGGGCTGGTGGGGGGGAAAATTGATGAATAACGAGacaaaaacac
acaaaaagagTATTTTCccagtttttccttttttgtaaaaagtataATCA
TATCTCTCTCTCGATgaaactgaggaaaaaagtagTTTTAACCAGTTTCT
AACCTAGTTAAAGTAACAATAATGACTTTCCAGAATCATTTTTTAGACAG
AAAACACAGCATGTTTGTTCAGCAACTTATCCACCATCTTTAGATCATTT
TCTATTTCTCCCGATTATGAATTGGATGATCGGATtaccaaaacaaaaca
gaaaacgttcgaaagttcgaaattttcaaattcgaatgttttattttgaa
tatttctaagaGTTCTAAGAGTTCCTAGAATTGTAATGTCATGTGTCAAG
CTGTTATTAAAAGGTATTCCTGACTGTCCTAGAAAGAAGATACATAAAAA
AGATAGAACCATAAACCTGTCATAAACTGATAACagtaaaaatttgagaa
atctaGTTTAAAATTCTCGTTTTGAAAAcagttaatacaccttttttctt
ccaaaattctgtatacaccaccccttttggcagttagtacactggtgtac
taactgcattttgaaaatttgaaaaatggacccaccACAGTACTAAGTGT
CATGGGTGtcgtgtactaactgcttgccccccccccctgagagCCACAGT
AAGAACCGCCAAAAAAccgccaaaaaaagtttttttggcatataaaatca
attttttccgTTCACAAAGTTATGTCCACACAGATTTGACacagaaaaag
attgaaaagcTTTAGCTCACTGGTAGGGTAGGGagtcaacagccattttt
ggggcaaagtcaaaaaattcaagatgtagtgttttttatgaaaatttaac
ctattgtgaggcattctgagCAATTTTTAacgtcagaagtccaaaattgg
ccgaacccccttGGGGGTACTGATttgcactacaggcaaaaattggaaaa
aatggcattttctgaccttttcaggcctgtaaatttgtcaaaactattta
aaatcttatttttttcatttgctgtactaaattttttgaagaaacaacaa
aataatcgtATTGGGTTGAAAATAGTGCCCATTGGaaccctaaacgagcc
gttttaagccaattttgagtagcaaaatgctttttaaggccaattttgca
agttcataaactgaTTAATTCACACGTCTGAAATTttagagatggaagtc
ttcaataaagtctttaagcaaattgaatttcaagtttttcacttttttca
aaaattcataatggcgttttcaaaaatcgctttttagcaaaaaaaaaatt
atcaaataggtctgggatgcgtctatgtccgccattttggaaataaaatc
tttgctaagagccatttttcaggcaaaaacccaaatttggactgaaaaaa
tctctaaaatgacaatagaaatggacccgaattttcttgcagtgatagta
ttctggaaatactgcaggaaaatcaaagtcatctgggtttGGCATTTGGG
TATTTcccccattttggaattgaaattcctgctaaaacgcaataatTTAA
GCtaaaatcccatttttgactggaaaaatcttaaaaatggcaacagacat
gaacctaaaatcttttttcagtgatagtcttctggaaatactccagggaa
atcaaaatcatttgggtttaggatttgggtatatccgccacatgtccgca
acaaaaagttatgtccgcaacaaatcATGAAGTTTTTTCAATCTCCAAAC
ACCAATTTTaggtttctttgacaaattattgCATCTAAGGTCATTTTAAG
TTGGTTACAACGTTACaaccagaaaaaagttccataATTTTCCATTGGCA
ACATTTCCAGTTTATTTACCTCTTTCATATGTATTttatgttgcggacat
aactctTTCGTCTAAAATGTTGCTGATAAAGTGTATTTGCAAGCTGAcat
gatgttttattatatggaagtaatgcttaggctattagaaatagaaaaca
agtaCTCTGATGCCAAGTTAAGGtccaaaataaaagttttaacagaatta
aatgaactttttgttttgttgaaaatgATGGTTCTGAACCTGTGAGCTTG
AATAAAGGATAAATCATGCATTAGNtttgttttgttgaaaatgATGGTTC
TGAACCTGTGAGCTTGAATAAAGGATAAATCATGCATTAATTTGCATATT
AAATTCATTGTGTAGTGTACAGACTAGTTAGAATTGCTCCAATAGTTCAA
AACAGAGTCATATTCTGTAGCAAAttgtatgttgcggacataCAGTAACT
ATTTAAAGTATTAATCAGATTTTTAACCCTCTTAAGCAGTTATGCTAACA
CCTTGACAATACTAAAGAGTTACATTTATAAGTACCATGCATTTCcttgc
ttttttcaattttttgtgtcctctagggtcgttcttctattagaaatatt
agaaagttttaatatcattgtggagtcttcttttgttctttaaaaaaaac
atgtaataactgaagtcaaaccaaaccaaatcttttggttttatattgat
ttagtctCAAATATTCCATAAATTTTGGCAACAGAAAACGACactccaaa
attttaaataaatgatGTAAAATATTCTATGGTTCTACCCTGGAagaaaa
aagttatgtccgcaacatagcATTATTACCCATTTAaccctttctattga
aaagGTTGAGTggattttcaaggaaaaatccTATTTACTGATTATAAAGA
TGTACAACAGTTAATgtcaagctcaaaatttaacttttaaaattagatta
tgacaaaaaatgatatatgattggattctcttttacagatacatcttcaa
ttttcaggaaatcatagttacaaatacctttcaagacaacaaatttcaat
gattaagttttggttcaagtacagcaaagtattaaaagccaaataataac
tcagtttaatgtttattgctgattttaaagtaaatttgacaaaaagttcc
gcaaccaacaaggtttaattttctaattttttattgatcacagtgctgca
aataacagccggtgaccggtaattaccggtcatttcatagtttctaccgg
ccattctgaagctcagtttttcattttgtccggttaaaatttgaagatta
gagGCTTAGATTAATACTTACAGCGCTTCATtaaaataggtgtttagcca
atcGAATAATCCAATAAGTCAATCTGTAATAACAGACTACAAAGATGGTT
CCGCCAGACCCCCTGCTCGTTACACTCGAAAAATTTccggccaactgaaa
tttccctatttgcagcactggatcaactgaaatatagcaaacttgttttt
tttgaaagcttatAATGAGTCCTTCAAATCTAGGATGAAGAAGTTACCTG
ATTATagccagttttcttttcatgaagtcaaactttTTGGGAATactttt
tagtattttagatttttttcttggaaaaagtgtcagaatttgaaaaatat
gtcatACTGGGCGATAGATTATGCATATTTTATCTCAAATGAAGTaaaca
aagagttttttgccaaatttgtctgATTATAACTACTCTAGGTCAAATTT
CTGGACCAAGctgaaaattgaagtcattgataaaaagattatccaggaat
aaaagtgaaattcaaaacttNAGctgaaaattgaagtcattaataaaaag
attatccaggaataaaagtgaaattcaaaactttattttttccaattttt
ttcacctATTTGGGTGACATTACAGTACCAGATTCATGCtcatataagaa
atatttttaattttattttatgacaatttctttgagtagttttatttgaa
aagttcttcctgttacacaactcaccccctcccaccctgggaaaacacac
taagttCACGCACACACATTCGAACAGAAGCACATGCACACACACAAACA
AGAATATTCCtcttcagctttgtatttgtccAACTtaaataccgtaagtt
ggtctaatgtcaacatcacTATTCAAATTTCCACACCCTTTATTAGAGAA
TATGTTTTatcatttcaaaaactttttctaatcttgtagCACTTGTTTTA
CATACGTATGCGCATACCGGGCTTGGCCGGGCTAGTGCACATCTCATCCT
GGTGGATTTAAATCTAAAATTCCTCCCTTCCGAGATGGCTTCTGTTTTAG
CCTCTAAAATCATGTCTGCCTCATTAAACTACCCTGTCGTATAATGTaat
taatttttcttcatttttacttTCAGTTTTCCCAATGGTGAAAAACCAGC
AGTCTCGTCATTCTTGCAAGAAAGTTGACCCAACTAATGCTGAATGTCTA
CAAGACATCAATAAATGTTCCAACGTTACTTGTGAAGAAGATGATAATCA
CTGTATGACTGTTTACAAACTTGAGAAAGGTCGCTTTGTACCCTTCTTCG
GTGGATGTTTTGGAACACCTCACGACCAGTCAACTACTTCCCATAACAAG
TGTGTATTGTATCAAAGAAACCCTCACTACCCTACCCACTATGATTGCTT
TTGCTCAGGTTCCTTTTGCAATGCAAATATCATTTTTCCGCAGATCAAGT
CTACCACAGGTATTGCCACTTAAGattttcgaattatttttaatgcattt
ACTTTTATCATTATTCCAGATCTCCCACGCGACACAATCGATTATTCATC
CATCGAGTCGACTGTTTAACGATTGGTTCTAAGGTGATCTGTTGTTAAAC
AACTGATGgattgatactcaagattttttaataTTCTAAATTACCTTTCG
GTTTTAAAATGGAACCATTCGATATCCAATCCATCGATTGGATATTGATT
GGTGAAAAAAATGTATCGACTGGGAGAGTCTGGAATATTTCGTTGTGTTT
TAATTGTTTGAATGTGAAATCCGTATCATTTAAAGTTAGATAGGAACCGT
GTACGTGGGATAAATTTTTGaggatttctttttaaattaaaatacaaaaa
tgcatATACCATTCAAAGTAATAACTTGATTTCAACTCTAAGTACGTTTA
TTAATGGAATTTGTGGCATGCTTTGATAATGAAGAGATGGGTTCTAGGCT
GACCACAATCATTCTCTTTCTTCAACCTTTTGATGCGATAATGATTGTAG
GATATTGTATCGTGTATTGCTCTTTTCTCGCGAAACAAATCATGGAAGAC
CACAAATGGCTTTTTTATGAGATGCCTTAAACCTGTTGTTTGATTACAAA
GTATTGTCTGTGTAAATGTCTTTATTTTTCCTGGAATATTTGCTCTGATT
TCTTGGggttttgaagatgttttacaTAACTTAACCTATAACCTCACATG
GATACCTTGTTTTTTCAACGGTGCGGTTTATTTTTTTGCACTTACAATat
cgtgtttttttttgtcatgtAGAACAACCAGTGAGAAACACGACAAAAGC
ACTTTCCAGTTTGCAGCCCACTCAACGTACCGACTCTTCCGAGAAACTAT
ATCTTTATTATATCCCGGCATCGATCTTCCTAATGACTATGGTTCTTGGT
GTTGCTCTATTCTTTTGGATAAAACGAAAACGCCGTCGCCGGAATAGCCA
TGAAACCCTGCTGACAGAATTTAACACGACCATGACGCAACCGAAAACCT
ATCCAGCGTCTTTTCTCGAGATCATTCACCAAGGACAAATGAACACTATC
TGGAAAGCTACTTTTTGTCAGCGAGCGGCTGCCATCAAAATTGTTAATAA
GCTTGACGTGACCCAATGGGTCAAcgagaaagatatttttctcaatCATA
AACTTAAACATGATAATGTTGTAAATTTTATATCAGCCGAGAGACGTTTT
AAAGAGACGACTGTCCAATACTGGATCGTTACTGAGTACCACGAAAAAGG
TTCATTAGCGAACTACTtattgaagaatattttatccAAAGAAACATTCT
TGAGAATGCTATATAGTACAGTTAAAGGACTTGTATATTTACATTCGAAT
AGTAAAATGAAGCCCATGGTAGCTCACAGAGACTTGAAACCAGCAAATGT
TTTGGTGAAGGCCGATTTATCGTGTTGTATATGTGATCTTGGTCTCGCTT
TACCTCTGCCTGAAAATATTGACGTCTCCAGAGAACTCTGTCAAGTAAGT
ATCCTTCGTTTTTTGGACCTATCTCGGAGGTTttttaaattaacctttgt
taaCCTTTCCTCAAGTTGTTCTATACTATTGTTgccattttttctattgt
cttatTTCacaatcatcaggtaggtccattcagcatgtagcttgttttaa
TTTCAATATCTCTTCAATATTATATCTACAGTGTCCTGTTTATTCTGCAT
CGTGCTATGACATTTCACCAGGATTTAttattatttacatttttaatcAT
CgaccaaaaaagtaaaatttgaatCAACACCTTCAATTTTCCTGGCAGCA
ACAAATAATCATAGCGTATTGATTGATCATAAAATCATTCTTATTTTGTC
AAATGAGCAGGCTGGAACAAAGCGTTATATGGCGCCAGAAATTTTACAAG
GAGCAGTCACATTTTATCAAGAATCCTTCTTGAGGGCGGATATGTATTCG
ATGGGTCTTCTATTCTGGGATTTGCTCTCTCGCACCAAGATAGATGAATC
TATAGGTATGTTTCTTTTCATTCGATCTCTTGTGGAACAATAATTACTCT
AGAACTTTTTGGGTGTCTAGAATGTATTTTAGTGAATGTTTAAAAATATA
TGCCAGCTGACTACATATCGGTCGCTGTAAAATAAGAGTGCCTTATGTCC
AATACTACAAACATGAGAATACTTAAAATGCTATTtcctcaaaatgtcaa
aaatggaCATAAGGCACTCTTATTTTACAGCGACGATATGGAGTGTAGGA
AATGTTATCATGTCCCAATTCAGATATCTATCTAGTGCTTATGCCAATTT
TACCTATTTGTTCCTGCTTTTAGAAGTTGAGGAATACAAACCGCCGTATT
CAGGACTGGTGAATTTCAATCCGAGTGTAGATGAAATGTTGAAATGTGTT
GTTGAAAATCACAAGCGACCTCATATCCCAAACCATTGGAAGGAAACACA
GGTACTGGCCAAGCTTTGCTCTCTCTCCTTTGCAATTTAAGTTTCACAAG
AACGAGTCACACAACGAGTCAATTTGATATTGTCACCtctctactttaat
gggataaactttcgcggggattaaatttcgcggggacttaatttcgcggg
tggcactattgggtggtaatattttcacgattttgtgaNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTATTTATTTggcatattttgagttt
tgtttagaaatatttcgcgaatgaggcccttccaaatttccattgggact
taatttcgcggattttcgtgGATGACAcctaaatccgcgaaatccgcgaa
atttaatccccgcgaaagtttatcccattaaagtattctgTCGAGATTCT
AGGAAAGCTAGGTTTATCCTTTTAGAATCAGTTTTTTACCCATCATAATG
CTAGAGAATCTACATTTTCGTCCTTTCGCgaattttttttcggtcttttt
atcttgaaaccATAAAGACTTCAGCACTTTGAAAACGTTTTAAAGGAATG
ATTCGGCACTGATCTTGGCCTGACAATTAAAACATCTGCATTGGTATCAT
GCAATTCTATATGTCATGGTTCAAAGCCATTCAAAAGGCTGTGCAAATAA
CTCAGTAAATTAATCTCTACTTTCACATGAAGCTGATCTCATTTTGTGGC
TGCCTATGTGACGTCAATACGTTTATGTTCAGGGTTGGATTTTTTCGATC
ATTTTTTGTGGTTATATTTTGCCAGTGTGTTTGTCGTTGAAATCTTATCT
gggatatttttttttatttttaaggcgGTCTCAGTAACCTCATTCTTATC
ATGCCTCATTCTGCCTCGTTTTGTACAAATGTAATACTTGGTAATATTAG
AATCCCTAATTGCGTAATAATATGGGTGCCGGGGATCCGAAGGTTTGATG
TATCTTGGATCATTGAGACTCAGAAAATTTTCTCTTCACCGTGATAGAGA
GATCTTTAGATGAAAAGTCTGTAGTCATTAATTTATGTTTCCAGTCCCCT
TTTAGAGTTCAAGCATAACGTTTGCCAATTATAAACACCCTGCTTTTCTT
CCTTTCTAGTCCTTTGTGACGATCGTTGAAACAATGGAACTGTGTTGGGA
CGACGATGCTGACGCTCGTCTGACGTCACAATGTGTCGCTCAACGAATCA
GAAGACTTATTCATTCACCGCCCGATAACACATTCCAATCGCACGCCCTT
GAGCAGCTCAAAGAGGGTGAGAAGGAGAACTCGCAGAGTAGTAGTATTAG
TTCAAATTCAGCACTTTTGTGGGATAATTCGTCTACGAGGAAAGACTGTA
CATCCAACAAAAGCATAGGTAGCTATTCAACGACAGACGACCATAGTCAA
TATTCCTTATCATCTTCCTCCAATACTGTACTAACGAAATGTAACGCTTG
AATTGAGCGTGGCGCACGTGTATAAGTCGCTTGATTTGTCCTGTTAAATA
AATATCGAAGTGGGTTCAATTTCCTGCTGACTTGctctcaaaatctaagt
ttcggAAAATATACTCTCTTCTCAAGAAACTAACAGCATCGGgtgtcgtt
ttcaaaatattattgttCGACATTGTACTCATTGTTTGAAAGCGTTTACG
TTTTTATTTCTCAATCAATATGATATTCTATGAGCTGATTTTAAAAACGA
GGCCCTTAACGCTTTTTTGCATCTCTTTGAGAACCGGATGTGTTGACCAT
ACACTTATCTTGCAAAGAGTTTGTGAAAATTCTGgataattattcaaaaa
actAGCGTGGCGATTTACATGACAAATTTGTACATTCTATTATATACTAT
ATACTATTACATTATACTTTATATACTACTGTATACTATACTTATATAAC
ATATATGAAATCGTATTTATTCACCGTACATTAGTACTTCGGGCATGCTC
AGTACGCATCTCATAGGTTTAAGTAACAGGACGAACAAATTTCTCAATTA
CAAAAATATCTAGAAAGAGGAAGGCTATTTTTTACGTCGGGTGTGAAAAG
AGCATGTCTGAAGCCTTTATTTTCAGTTATTTAGAAATCCTATGAAAGCA
TTTCTTTGCTACTACGATAGTACACACACTAgaacaaattttggttaaaa
cacgcttattttagctttttgtaATTTGATCCGTCCGTTTTTAGTtggaa
agtaaatttttttcgtgatatccatgacgtaatgttttatacggaaacac
taAAGAAAACGGGGGTTTGTgccactagttttattgttCATAAATTCAAA
ACTAGTGGCAAAACACGTGCATCTTTTTAGTGTTTCCGTATGAAAGTACC
ATCATGgttttcaaagttcaaagaAATGCTTTCAAACATCATGTAAATAT
GATTTTTAGTTTAGTTACTACTCGAATCTTTTTCACGATTCTCAGGTTAA
TCAATTCGTTCGTTGTGGTGACAGGATCCACTTTGAAATTGTTAGGGCCA
TGATATGCCGACTAAAGTGGCGCCGACGGGCAAAAGGATCTTTTTTAAGG
GATGAATACGGAATTTGGTACTAATGTTAGTTAATGTTAATGTAATGACA
ATGAAACCTTTCTTATTGTTGAATTTTGAATAGAGGAAAATGCagaggtt
tttttttaaatcttgctttTCACAATAACAGCCAAAATCAATATTCTCAA
ACACTATTCTTGTGATAATGAGTACTTTTTGTCACCACACCACGGCAACG
ACAAAGATTGATAACTCGTTATTCATGGTATTCAAGGCGttatcttttat
acggaagaaCCCAAAACACTAAGCGTTTGCCACCAGTTCCAATTTCCAGA
CTCATCCAAGATTCATCTTTTCAAAAGATGTCAGCAAACGCAAAGTCGTC
TTTGGGTCTCCCGTATGAAATATTACGCCATGAATTATAGACTTGCAATG
TACATATTCATTATACAAAAgtgtatttttatgtttttatattttacccC
CTCATTATATACATACACATATTAATTATTGTTATATATCAGCATGGTTT
AGAGAACCGTATTATCCAAATATATCCCATATATAGGTTCGGTTACATCG
TGCAATTAGTTTTACGTCTATCCTCCATCTGAAAAATAACTTGACATTGA
CCAAGATGATAACGCTCCGCGTAGCATACGTCATAATCATAGATTtatta
aag

Coding sequence (CDS) from alignment at sc0000563:138961..153013+

>TCONS_00026127 ID=TCONS_00026127|Name=TCONS_00026127|organism=Clytia hemisphaerica|type=CDS|length=10242bp|location=Sequence derived from alignment at sc0000563:138961..153013+ (Clytia hemisphaerica)
ATGCATTTCATTTCACTTTGTTCAATCCTGATAGCTGTTTTCCCAATGGT
GAAAAACCAGCAGTCTCGTCATTCTTGCAAGAAAGTTGACCCAACTAATG
CTGAATGTCTACAAGACATCAATAAATGTTCCAACGTTACTTGTGAAGAA
GATGATAATCACTGTATGACTGTTTACAAACTTGAGAAAGGTCGCTTTGT
ACCCTTCTTCGGTGGATGTTTTGGAACACCTCACGACCAGTCAACTACTT
CCCATAACAAGTGTGTATTGTATCAAAGAAACCCTCACTACCCTACCCAC
TATGATTGCTTTTGCTCAGGTTCCTTTTGCAATGCAAATATCATTTTTCC
GCAGATCAAGTCTACCACAGAACAACCAGTGAGAAACACGACAAAAGCAC
TTTCCAGTTTGCAGCCCACTCAACGTACCGACTCTTCCGAGAAACTATAT
CTTTATTATATCCCGGCATCGATCTTCCTAATGACTATGGTTCTTGGTGT
TGCTCTATTCTTTTGGATAAAACGAAAACGCCGTCGCCGGAATAGCCATG
AAACCCTGCTGACAGAATTTAACACGACCATGACGCAACCGAAAACCTAT
CCAGCGTCTTTTCTCGAGATCATTCACCAAGGACAAATGAACACTATCTG
GAAAGCTACTTTTTGTCAGCGAGCGGCTGCCATCAAAATTGTTAATAAGC
TTGACGTGACCCAATGGGTCAAcgagaaagatatttttctcaatCATAAA
CTTAAACATGATAATGTTGTAAATTTTATATCAGCCGAGAGACGTTTTAA
AGAGACGACTGTCCAATACTGGATCGTTACTGAGTACCACGAAAAAGGTT
CATTAGCGAACTACTtattgaagaatattttatccAAAGAAACATTCTTG
AGAATGCTATATAGTACAGTTAAAGGACTTGTATATTTACATTCGAATAG
TAAAATGAAGCCCATGGTAGCTCACAGAGACTTGAAACCAGCAAATGTTT
TGGTGAAGGCCGATTTATCGTGTTGTATATGTGATCTTGGTCTCGCTTTA
CCTCTGCCTGAAAATATTGACGTCTCCAGAGAACTCTGTCAAGCTGGAAC
AAAGCGTTATATGGCGCCAGAAATTTTACAAGGAGCAGTCACATTTTATC
AAGAATCCTTCTTGAGGGCGGATATGTATTCGATGGGTCTTCTATTCTGG
GATTTGCTCTCTCGCACCAAGATAGATGAATCTATAGAAGTTGAGGAATA
CAAACCGCCGTATTCAGGACTGGTGAATTTCAATCCGAGTGTAGATGAAA
TGTTGAAATGTGTTGTTGAAAATCACAAGCGACCTCATATCCCAAACCAT
TGGAAGGAAACACAGTCCTTTGTGACGATCGTTGAAACAATGGAACTGTG
TTGGGACGACGATGCTGACGCTCGTCTGACGTCACAATGTGTCGCTCAAC
GAATCAGAAGACTTATTCATTCACCGCCCGATAACACATTCCAATCGCAC
GCCCTTGAGCAGCTCAAAGAGGGTGAGAAGGAGAACTCGCAGAGTAGTAG
TATTAGTTCAAATTCAGCACTTTTGTGGGATAATTCGTCTACGAGGAAAG
ACTGTACATCCAACAAAAGCATAGGTAGCTATTCAACGACAGACGACCAT
AGTCAATATTCCTTATCATCTTCCTCCAATACTGTACTAACGAAATGTAA
CGCTTGAATGCATTTCATTTCACTTTGTTCAATCCTGATAGCTGTTTTCC
CAATGGTGAAAAACCAGCAGTCTCGTCATTCTTGCAAGAAAGTTGACCCA
ACTAATGCTGAATGTCTACAAGACATCAATAAATGTTCCAACGTTACTTG
TGAAGAAGATGATAATCACTGTATGACTGTTTACAAACTTGAGAAAGGTC
GCTTTGTACCCTTCTTCGGTGGATGTTTTGGAACACCTCACGACCAGTCA
ACTACTTCCCATAACAAGTGTGTATTGTATCAAAGAAACCCTCACTACCC
TACCCACTATGATTGCTTTTGCTCAGGTTCCTTTTGCAATGCAAATATCA
TTTTTCCGCAGATCAAGTCTACCACAGAACAACCAGTGAGAAACACGACA
AAAGCACTTTCCAGTTTGCAGCCCACTCAACGTACCGACTCTTCCGAGAA
ACTATATCTTTATTATATCCCGGCATCGATCTTCCTAATGACTATGGTTC
TTGGTGTTGCTCTATTCTTTTGGATAAAACGAAAACGCCGTCGCCGGAAT
AGCCATGAAACCCTGCTGACAGAATTTAACACGACCATGACGCAACCGAA
AACCTATCCAGCGTCTTTTCTCGAGATCATTCACCAAGGACAAATGAACA
CTATCTGGAAAGCTACTTTTTGTCAGCGAGCGGCTGCCATCAAAATTGTT
AATAAGCTTGACGTGACCCAATGGGTCAAcgagaaagatatttttctcaa
tCATAAACTTAAACATGATAATGTTGTAAATTTTATATCAGCCGAGAGAC
GTTTTAAAGAGACGACTGTCCAATACTGGATCGTTACTGAGTACCACGAA
AAAGGTTCATTAGCGAACTACTtattgaagaatattttatccAAAGAAAC
ATTCTTGAGAATGCTATATAGTACAGTTAAAGGACTTGTATATTTACATT
CGAATAGTAAAATGAAGCCCATGGTAGCTCACAGAGACTTGAAACCAGCA
AATGTTTTGGTGAAGGCCGATTTATCGTGTTGTATATGTGATCTTGGTCT
CGCTTTACCTCTGCCTGAAAATATTGACGTCTCCAGAGAACTCTGTCAAG
CTGGAACAAAGCGTTATATGGCGCCAGAAATTTTACAAGGAGCAGTCACA
TTTTATCAAGAATCCTTCTTGAGGGCGGATATGTATTCGATGGGTCTTCT
ATTCTGGGATTTGCTCTCTCGCACCAAGATAGATGAATCTATAGAAGTTG
AGGAATACAAACCGCCGTATTCAGGACTGGTGAATTTCAATCCGAGTGTA
GATGAAATGTTGAAATGTGTTGTTGAAAATCACAAGCGACCTCATATCCC
AAACCATTGGAAGGAAACACAGTCCTTTGTGACGATCGTTGAAACAATGG
AACTGTGTTGGGACGACGATGCTGACGCTCGTCTGACGTCACAATGTGTC
GCTCAACGAATCAGAAGACTTATTCATTCACCGCCCGATAACACATTCCA
ATCGCACGCCCTTGAGCAGCTCAAAGAGGGTGAGAAGGAGAACTCGCAGA
GTAGTAGTATTAGTTCAAATTCAGCACTTTTGTGGGATAATTCGTCTACG
AGGAAAGACTGTACATCCAACAAAAGCATAGGTAGCTATTCAACGACAGA
CGACCATAGTCAATATTCCTTATCATCTTCCTCCAATACTGTACTAACGA
AATGTAACGCTTGAATGCATTTCATTTCACTTTGTTCAATCCTGATAGCT
GTTTTCCCAATGGTGAAAAACCAGCAGTCTCGTCATTCTTGCAAGAAAGT
TGACCCAACTAATGCTGAATGTCTACAAGACATCAATAAATGTTCCAACG
TTACTTGTGAAGAAGATGATAATCACTGTATGACTGTTTACAAACTTGAG
AAAGGTCGCTTTGTACCCTTCTTCGGTGGATGTTTTGGAACACCTCACGA
CCAGTCAACTACTTCCCATAACAAGTGTGTATTGTATCAAAGAAACCCTC
ACTACCCTACCCACTATGATTGCTTTTGCTCAGGTTCCTTTTGCAATGCA
AATATCATTTTTCCGCAGATCAAGTCTACCACAGAACAACCAGTGAGAAA
CACGACAAAAGCACTTTCCAGTTTGCAGCCCACTCAACGTACCGACTCTT
CCGAGAAACTATATCTTTATTATATCCCGGCATCGATCTTCCTAATGACT
ATGGTTCTTGGTGTTGCTCTATTCTTTTGGATAAAACGAAAACGCCGTCG
CCGGAATAGCCATGAAACCCTGCTGACAGAATTTAACACGACCATGACGC
AACCGAAAACCTATCCAGCGTCTTTTCTCGAGATCATTCACCAAGGACAA
ATGAACACTATCTGGAAAGCTACTTTTTGTCAGCGAGCGGCTGCCATCAA
AATTGTTAATAAGCTTGACGTGACCCAATGGGTCAAcgagaaagatattt
ttctcaatCATAAACTTAAACATGATAATGTTGTAAATTTTATATCAGCC
GAGAGACGTTTTAAAGAGACGACTGTCCAATACTGGATCGTTACTGAGTA
CCACGAAAAAGGTTCATTAGCGAACTACTtattgaagaatattttatccA
AAGAAACATTCTTGAGAATGCTATATAGTACAGTTAAAGGACTTGTATAT
TTACATTCGAATAGTAAAATGAAGCCCATGGTAGCTCACAGAGACTTGAA
ACCAGCAAATGTTTTGGTGAAGGCCGATTTATCGTGTTGTATATGTGATC
TTGGTCTCGCTTTACCTCTGCCTGAAAATATTGACGTCTCCAGAGAACTC
TGTCAAGCTGGAACAAAGCGTTATATGGCGCCAGAAATTTTACAAGGAGC
AGTCACATTTTATCAAGAATCCTTCTTGAGGGCGGATATGTATTCGATGG
GTCTTCTATTCTGGGATTTGCTCTCTCGCACCAAGATAGATGAATCTATA
GAAGTTGAGGAATACAAACCGCCGTATTCAGGACTGGTGAATTTCAATCC
GAGTGTAGATGAAATGTTGAAATGTGTTGTTGAAAATCACAAGCGACCTC
ATATCCCAAACCATTGGAAGGAAACACAGTCCTTTGTGACGATCGTTGAA
ACAATGGAACTGTGTTGGGACGACGATGCTGACGCTCGTCTGACGTCACA
ATGTGTCGCTCAACGAATCAGAAGACTTATTCATTCACCGCCCGATAACA
CATTCCAATCGCACGCCCTTGAGCAGCTCAAAGAGGGTGAGAAGGAGAAC
TCGCAGAGTAGTAGTATTAGTTCAAATTCAGCACTTTTGTGGGATAATTC
GTCTACGAGGAAAGACTGTACATCCAACAAAAGCATAGGTAGCTATTCAA
CGACAGACGACCATAGTCAATATTCCTTATCATCTTCCTCCAATACTGTA
CTAACGAAATGTAACGCTTGAATGCATTTCATTTCACTTTGTTCAATCCT
GATAGCTGTTTTCCCAATGGTGAAAAACCAGCAGTCTCGTCATTCTTGCA
AGAAAGTTGACCCAACTAATGCTGAATGTCTACAAGACATCAATAAATGT
TCCAACGTTACTTGTGAAGAAGATGATAATCACTGTATGACTGTTTACAA
ACTTGAGAAAGGTCGCTTTGTACCCTTCTTCGGTGGATGTTTTGGAACAC
CTCACGACCAGTCAACTACTTCCCATAACAAGTGTGTATTGTATCAAAGA
AACCCTCACTACCCTACCCACTATGATTGCTTTTGCTCAGGTTCCTTTTG
CAATGCAAATATCATTTTTCCGCAGATCAAGTCTACCACAGAACAACCAG
TGAGAAACACGACAAAAGCACTTTCCAGTTTGCAGCCCACTCAACGTACC
GACTCTTCCGAGAAACTATATCTTTATTATATCCCGGCATCGATCTTCCT
AATGACTATGGTTCTTGGTGTTGCTCTATTCTTTTGGATAAAACGAAAAC
GCCGTCGCCGGAATAGCCATGAAACCCTGCTGACAGAATTTAACACGACC
ATGACGCAACCGAAAACCTATCCAGCGTCTTTTCTCGAGATCATTCACCA
AGGACAAATGAACACTATCTGGAAAGCTACTTTTTGTCAGCGAGCGGCTG
CCATCAAAATTGTTAATAAGCTTGACGTGACCCAATGGGTCAAcgagaaa
gatatttttctcaatCATAAACTTAAACATGATAATGTTGTAAATTTTAT
ATCAGCCGAGAGACGTTTTAAAGAGACGACTGTCCAATACTGGATCGTTA
CTGAGTACCACGAAAAAGGTTCATTAGCGAACTACTtattgaagaatatt
ttatccAAAGAAACATTCTTGAGAATGCTATATAGTACAGTTAAAGGACT
TGTATATTTACATTCGAATAGTAAAATGAAGCCCATGGTAGCTCACAGAG
ACTTGAAACCAGCAAATGTTTTGGTGAAGGCCGATTTATCGTGTTGTATA
TGTGATCTTGGTCTCGCTTTACCTCTGCCTGAAAATATTGACGTCTCCAG
AGAACTCTGTCAAGCTGGAACAAAGCGTTATATGGCGCCAGAAATTTTAC
AAGGAGCAGTCACATTTTATCAAGAATCCTTCTTGAGGGCGGATATGTAT
TCGATGGGTCTTCTATTCTGGGATTTGCTCTCTCGCACCAAGATAGATGA
ATCTATAGAAGTTGAGGAATACAAACCGCCGTATTCAGGACTGGTGAATT
TCAATCCGAGTGTAGATGAAATGTTGAAATGTGTTGTTGAAAATCACAAG
CGACCTCATATCCCAAACCATTGGAAGGAAACACAGTCCTTTGTGACGAT
CGTTGAAACAATGGAACTGTGTTGGGACGACGATGCTGACGCTCGTCTGA
CGTCACAATGTGTCGCTCAACGAATCAGAAGACTTATTCATTCACCGCCC
GATAACACATTCCAATCGCACGCCCTTGAGCAGCTCAAAGAGGGTGAGAA
GGAGAACTCGCAGAGTAGTAGTATTAGTTCAAATTCAGCACTTTTGTGGG
ATAATTCGTCTACGAGGAAAGACTGTACATCCAACAAAAGCATAGGTAGC
TATTCAACGACAGACGACCATAGTCAATATTCCTTATCATCTTCCTCCAA
TACTGTACTAACGAAATGTAACGCTTGAATGCATTTCATTTCACTTTGTT
CAATCCTGATAGCTGTTTTCCCAATGGTGAAAAACCAGCAGTCTCGTCAT
TCTTGCAAGAAAGTTGACCCAACTAATGCTGAATGTCTACAAGACATCAA
TAAATGTTCCAACGTTACTTGTGAAGAAGATGATAATCACTGTATGACTG
TTTACAAACTTGAGAAAGGTCGCTTTGTACCCTTCTTCGGTGGATGTTTT
GGAACACCTCACGACCAGTCAACTACTTCCCATAACAAGTGTGTATTGTA
TCAAAGAAACCCTCACTACCCTACCCACTATGATTGCTTTTGCTCAGGTT
CCTTTTGCAATGCAAATATCATTTTTCCGCAGATCAAGTCTACCACAGAA
CAACCAGTGAGAAACACGACAAAAGCACTTTCCAGTTTGCAGCCCACTCA
ACGTACCGACTCTTCCGAGAAACTATATCTTTATTATATCCCGGCATCGA
TCTTCCTAATGACTATGGTTCTTGGTGTTGCTCTATTCTTTTGGATAAAA
CGAAAACGCCGTCGCCGGAATAGCCATGAAACCCTGCTGACAGAATTTAA
CACGACCATGACGCAACCGAAAACCTATCCAGCGTCTTTTCTCGAGATCA
TTCACCAAGGACAAATGAACACTATCTGGAAAGCTACTTTTTGTCAGCGA
GCGGCTGCCATCAAAATTGTTAATAAGCTTGACGTGACCCAATGGGTCAA
cgagaaagatatttttctcaatCATAAACTTAAACATGATAATGTTGTAA
ATTTTATATCAGCCGAGAGACGTTTTAAAGAGACGACTGTCCAATACTGG
ATCGTTACTGAGTACCACGAAAAAGGTTCATTAGCGAACTACTtattgaa
gaatattttatccAAAGAAACATTCTTGAGAATGCTATATAGTACAGTTA
AAGGACTTGTATATTTACATTCGAATAGTAAAATGAAGCCCATGGTAGCT
CACAGAGACTTGAAACCAGCAAATGTTTTGGTGAAGGCCGATTTATCGTG
TTGTATATGTGATCTTGGTCTCGCTTTACCTCTGCCTGAAAATATTGACG
TCTCCAGAGAACTCTGTCAAGCTGGAACAAAGCGTTATATGGCGCCAGAA
ATTTTACAAGGAGCAGTCACATTTTATCAAGAATCCTTCTTGAGGGCGGA
TATGTATTCGATGGGTCTTCTATTCTGGGATTTGCTCTCTCGCACCAAGA
TAGATGAATCTATAGAAGTTGAGGAATACAAACCGCCGTATTCAGGACTG
GTGAATTTCAATCCGAGTGTAGATGAAATGTTGAAATGTGTTGTTGAAAA
TCACAAGCGACCTCATATCCCAAACCATTGGAAGGAAACACAGTCCTTTG
TGACGATCGTTGAAACAATGGAACTGTGTTGGGACGACGATGCTGACGCT
CGTCTGACGTCACAATGTGTCGCTCAACGAATCAGAAGACTTATTCATTC
ACCGCCCGATAACACATTCCAATCGCACGCCCTTGAGCAGCTCAAAGAGG
GTGAGAAGGAGAACTCGCAGAGTAGTAGTATTAGTTCAAATTCAGCACTT
TTGTGGGATAATTCGTCTACGAGGAAAGACTGTACATCCAACAAAAGCAT
AGGTAGCTATTCAACGACAGACGACCATAGTCAATATTCCTTATCATCTT
CCTCCAATACTGTACTAACGAAATGTAACGCTTGAATGCATTTCATTTCA
CTTTGTTCAATCCTGATAGCTGTTTTCCCAATGGTGAAAAACCAGCAGTC
TCGTCATTCTTGCAAGAAAGTTGACCCAACTAATGCTGAATGTCTACAAG
ACATCAATAAATGTTCCAACGTTACTTGTGAAGAAGATGATAATCACTGT
ATGACTGTTTACAAACTTGAGAAAGGTCGCTTTGTACCCTTCTTCGGTGG
ATGTTTTGGAACACCTCACGACCAGTCAACTACTTCCCATAACAAGTGTG
TATTGTATCAAAGAAACCCTCACTACCCTACCCACTATGATTGCTTTTGC
TCAGGTTCCTTTTGCAATGCAAATATCATTTTTCCGCAGATCAAGTCTAC
CACAGAACAACCAGTGAGAAACACGACAAAAGCACTTTCCAGTTTGCAGC
CCACTCAACGTACCGACTCTTCCGAGAAACTATATCTTTATTATATCCCG
GCATCGATCTTCCTAATGACTATGGTTCTTGGTGTTGCTCTATTCTTTTG
GATAAAACGAAAACGCCGTCGCCGGAATAGCCATGAAACCCTGCTGACAG
AATTTAACACGACCATGACGCAACCGAAAACCTATCCAGCGTCTTTTCTC
GAGATCATTCACCAAGGACAAATGAACACTATCTGGAAAGCTACTTTTTG
TCAGCGAGCGGCTGCCATCAAAATTGTTAATAAGCTTGACGTGACCCAAT
GGGTCAAcgagaaagatatttttctcaatCATAAACTTAAACATGATAAT
GTTGTAAATTTTATATCAGCCGAGAGACGTTTTAAAGAGACGACTGTCCA
ATACTGGATCGTTACTGAGTACCACGAAAAAGGTTCATTAGCGAACTACT
tattgaagaatattttatccAAAGAAACATTCTTGAGAATGCTATATAGT
ACAGTTAAAGGACTTGTATATTTACATTCGAATAGTAAAATGAAGCCCAT
GGTAGCTCACAGAGACTTGAAACCAGCAAATGTTTTGGTGAAGGCCGATT
TATCGTGTTGTATATGTGATCTTGGTCTCGCTTTACCTCTGCCTGAAAAT
ATTGACGTCTCCAGAGAACTCTGTCAAGCTGGAACAAAGCGTTATATGGC
GCCAGAAATTTTACAAGGAGCAGTCACATTTTATCAAGAATCCTTCTTGA
GGGCGGATATGTATTCGATGGGTCTTCTATTCTGGGATTTGCTCTCTCGC
ACCAAGATAGATGAATCTATAGAAGTTGAGGAATACAAACCGCCGTATTC
AGGACTGGTGAATTTCAATCCGAGTGTAGATGAAATGTTGAAATGTGTTG
TTGAAAATCACAAGCGACCTCATATCCCAAACCATTGGAAGGAAACACAG
TCCTTTGTGACGATCGTTGAAACAATGGAACTGTGTTGGGACGACGATGC
TGACGCTCGTCTGACGTCACAATGTGTCGCTCAACGAATCAGAAGACTTA
TTCATTCACCGCCCGATAACACATTCCAATCGCACGCCCTTGAGCAGCTC
AAAGAGGGTGAGAAGGAGAACTCGCAGAGTAGTAGTATTAGTTCAAATTC
AGCACTTTTGTGGGATAATTCGTCTACGAGGAAAGACTGTACATCCAACA
AAAGCATAGGTAGCTATTCAACGACAGACGACCATAGTCAATATTCCTTA
TCATCTTCCTCCAATACTGTACTAACGAAATGTAACGCTTGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_014692	XLOC_014692	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00026127-protein	TCONS_00026127-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000563	supercontig	sc0000563:138961..153013 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.1181	3.45028	0.685329	0.259809	7.41478	5.49709	4.81444	3.9755	4.62688	6.45152	8.03621	7.45776	9.41705	11.1914	2.08074	4.99121	10.2334	10.1841	4.08399	5.43704	11.8916	14.8474	0.00257426	3.27076	6.35549	5.192	4.64114	3.07551	3.05733	2.15469

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR000333	TGFB_receptor
IPR000719	Prot_kinase_dom
IPR017194	Transform_growth_fac-b_typ-2
IPR008271	Ser/Thr_kinase_AS
IPR011009	Kinase-like_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004702	signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0005524	ATP binding
GO:0004672	protein kinase activity
GO:0004872	receptor activity
GO:0046872	metal ion binding
GO:0004674	protein serine/threonine kinase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0007178	transmembrane receptor protein serine/threonine kinase signaling pathway
GO:0006468	protein phosphorylation
GO:0007179	transforming growth factor beta receptor signaling pathway

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane
GO:0016021	integral component of membrane
GO:0043235	receptor complex

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0007179	transforming growth factor beta receptor signaling pathway
biological_process	GO:0007178	transmembrane receptor protein serine/threonine kinase signaling pathway
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0043235	receptor complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0004872	receptor activity
molecular_function	GO:0004702	signal transducer, downstream of receptor, with serine/threonine kinase activity

Blast

[Close]

BLAST of TCONS_00026127 vs. Swiss-Prot (Human)
Match: AVR2B (Activin receptor type-2B OS=Homo sapiens GN=ACVR2B PE=1 SV=3)

HSP 1 Score: 249.21 bits (635), Expect = 2.691e-71
Identity = 153/471 (32.48%), Postives = 236/471 (50.11%), Query Frame = 3

Query:  285 LQDINKCSNVTCEEDDN---HCMTVYKLEKGRFVPFFGGCFGTPHDQSTTSHNKCVLYQRNPHYPTHYDCFCSGSFCNANIIFPQIKSTTEQPVRNTTKALSSLQPTQRTDSSEKLYLYYIPASIFLMTMVLGVALFFWIKRKRR----RRNSHETLLTEFNTTMTQPKTYPASFLEIIHQGQMNTIWKATFCQRAAAIKIVNKLDVTQWVNEKDIFLNHKLKHDNVVNFISAERRFKETTVQYWIVTEYHEKGSLANYLLKNILSKETFLRMLYSTVKGLVYLHSN------SKMKPMVAHRDLKPANVLVKADLSCCICDLGLALPLPENIDVSRELCQAGTKRYMAPEILQGAVTFYQESFLRADMYSMGLLFWDLLSRTKIDESIEVEEYKPPYSGLVNFNPSVDEMLKCVVENHKRPHIPNHWKETQSFVTIVETMELCWDDDADARLTSQCVAQR---IRRLIHS 1649
            L+  N+     CE + +   HC   ++   G       GC+    D +     +CV  + NP     Y C C G+FCN           T  P     +      PT  T  +    L Y    I  ++++  V L FW+ R R+      + HE       + +   K  P   LEI  +G+   +WKA       A+KI    D   W +E++IF    +KH+N++ FI+AE+R     V+ W++T +H+KGSL +YL  NI++      +  +  +GL YLH +         KP +AHRD K  NVL+K+DL+  + D GLA+             Q GT+RYMAPE+L+GA+ F +++FLR DMY+MGL+ W+L+SR K  +   V+EY  P+   +  +PS++E+ + VV    RP I +HW +      +  T+E CWD DA+ARL++ CV +R   IRR ++ 
Sbjct:   38 LERTNQSGLERCEGEQDKRLHCYASWRNSSGTIELVKKGCW--LDDFNCYDRQECVATEENPQV---YFCCCEGNFCNERF--------THLPEAGGPEVTYEPPPTAPTLLT---VLAYSLLPIGGLSLI--VLLAFWMYRHRKPPYGHVDIHEDPGPPPPSPLVGLK--PLQLLEIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADG-PVDEYMLPFEEEIGQHPSLEELQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAEARLSAGCVEERVSLIRRSVNG 487

The following BLAST results are available for this feature:

BLAST of TCONS_00026127 vs. Swiss-Prot (Human)

BLAST of TCONS_00026127 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
AVR2B	2.691e-71	32.48	Activin receptor type-2B OS=Homo sapiens GN=ACVR2B...	[more]

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TCONS_00026127 (transcript) - C. hemisphaerica