TCONS_00025833 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025833
Unique NameTCONS_00025833
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1448

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025833 ID=TCONS_00025833|Name=TCONS_00025833|organism=Clytia hemisphaerica|type=transcript|length=1448bp
gcaaggctgaaagccacacaAATATGGTTCATCcaataaaaggaagttca
ttctatggtggtatatcttgaagtgaaggtggttgaacaaacaaaatgtt
tttggcatattgatgtaactgacggTATGATATATAACTGACAAGAGAAA
CATAAATTGACTAGGAATCGAGGTAGATCGCAAGAAAGCCTGATAAATCC
ACAGATGGCAGCAGGAATTCTCTGACAAGAGAAATGTAAATCAAAGAATA
AGGGAACCCGCCCCGCAGGAGAGGAAAATCTGATTAACCTTGTTATAAAG
GATGATGACCTCCCTTGCAGTGCAATTGACAACAACTTACTTACTCTCAT
GTATACAAAACCAACTGAGGTGAACGATGATCCAAATAAGGAAAACTTCC
ATCGTTCATaatcaaattgaaacaaaaatatataGGTAATAAGTGAAAGA
TTTTGATGCatgtctttttcatttttggtcgccatctttgtttccgcatg
tttgtttttcttttccagcaATTCCGGAAGATTTGTTTCTGCCTGGTCAG
TTCAGAATACGGAACTATAGAGCGGAATTCGGGTTGCGCACGCAACCGAC
GACTATGAACAGGTAAAACATAAGGACATATTatagaaagaagaagatgg
atAAAGTTACTCAAGCTATGGTGGCTCACAAAGCCAGTGCTTTAAAATCT
GATATGAAGAGTTTTGGAGGTGGTTTGATAGGAGACGAAAATCCGGAAGA
TGAGCAACGTGAAAAAGCTGAAACAAAGAGGCGCCATAACTCACTAAAAG
ATATGGAAGAGCGACGCGAGCGTCAACGAGCAGAACGCCAGGAAGTGCAT
CGTAAACGAGAGGAAGATCGCGAAAAAGTACGAAGTGATATTCGTAATAA
GTATAAATTGAAAGGAAGTCAAAGTTACGATGGAAGTTATGGTAATAACA
AAGGTTCAAACGAACATCAATTATCTCAACAAACTGAAGAAATTTGCCAA
CAGGAGGAAAAAAGCTGTTCTATACAATGATGAATCTTTAATGCCTTTCC
AACGAAATTCCAGTGCATGATATTGGATTTAGGCTCTTACATCTAAAAGA
GAGAAATCTAACCCAGTGATAACGGTATCGTGGAATTGATCGCAACGCCA
GTTTCTCGCTCGACTACACGACCTATTGCTCCTCGTTCATATATGGAGTG
TTTGGAATCGAGACAGCCTCGTTTTAACATGGTGCTCATCAAAGTCCAAT
TCTTTGAGTTCGATACAATTTTGTATCCCTCAATGCAATAATATTTATCT
TTCCGATTTGGTTGTATTTATTAAATTGTatattttcgggaaaaaaaCTA
TTATTTTGTACTACAGTGTGTCCTGTTGAAAGTTTCAAAggtaaaattaa
attcaaaaggatatatattcttttttattgAATAGCTATACAATGGAG
Run BLAST on NCBI

protein sequence of TCONS_00025833-protein

>TCONS_00025833-protein ID=TCONS_00025833-protein|Name=TCONS_00025833-protein|organism=Clytia hemisphaerica|type=polypeptide|length=127bp
MDKVTQAMVAHKASALKSDMKSFGGGLIGDENPEDEQREKAETKRRHNSL
KDMEERRERQRAERQEVHRKREEDREKVRSDIRNKYKLKGSQSYDGSYGN
NKGSNEHQLSQQTEEICQQEEKSCSIQ
Run BLAST on NCBI

transcript from alignment at sc0000549:179269..188386+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025833 ID=TCONS_00025833|Name=TCONS_00025833|organism=Clytia hemisphaerica|type=transcript|length=9118bp|location=Sequence derived from alignment at sc0000549:179269..188386+ (Clytia hemisphaerica)
gcaaggctgaaagccacacaAATATGGTTCATCcaataaaaggaagttca ttctatggtggtatatcttgaagtgaaggtggttgaacaaacaaaatgtt tttggcatattgatgtaactgacggTATGATATATAACTGACAAGAGAAA CATAAATTGACTAGGAATCGAGGTAGATCGCAAGAAAGCCTGATAAATCC ACAGATGGCAGCAGGAATTCTCTGACAAGAGAAATGTAAATCAAAGAATA AGGGAACCCGCCCCGCAGGAGAGGAAAATCTGATTAACCTTGTTATAAAG GATGATGACCTCCCTTGCAGTGCAATTGACAACAACTTACTTACTCTCAT GTATACAAAACCAACTGAGGTGAACGATGATCCAAATAAGGAAAACTTCC ATCGTTCATaatcaaattgaaacaaaaatatataGGTAATAAGTGAAAGA TTTTGATGCatgtctttttcatttttggtcgccatctttgtttccgcatg tttgtttttcttttccagcaATTCCGGAAGATTTGTTTCTGCCTGGTCAG TTCAGAATACGGAACTATAGAGCGGAATTCGGGTTGCGCACGCAACCGAC GACTATGAACAGGTATGAGCTACACTTAAGGGTACctcttttttgtcttt tagaCTTCCAAAGTCCCCCACTAACGCACGGctggaaaaattagaaaatc taaTTTCCGAATTTCAGTCCTTCTAAGCCAATATGTCAAAGATTTTGTTC TCTGCTGAAGTTTCACTTCCCCTCACTTGTgaagaaaaactaaaagaatA TTATTGCGCCTGTCTGTGATGTCATTACATACAATacagtattttttcaa agaatcgagCATGGAGAATAAGTTATCGGGGAAAACTcagtcggggaaaa attcgtcacttgctggttgTTGGTAAAcacattaaggccggggaaaattt tcgtcgaggaaaatattcgtcacttgtccaaaatttcatcacttttcccc gacgaagttttccccgataaggtaaataTCACGCACTAGGAAATGTGTAA TATACTATGTACgttatcaaaataaattacTGATTAGTTGAGAAGCAATT AAATGACGCGGTAGCAAAGTTTAATTTTAAGATGATCATGCTACCAAGCC CTTTTTCCGAGGTCGAAAATAGGCCAAGTGGAGTTTTATCAAATATCAGA CTTTCCAGGgagttttttgctttaaaccCTGTAGCTACCATTGGTTAAGC TTACTTACCTACCGTGAAttaccgtgaatagcacaggtcaaaatcaaata ttgaaactgtgccgacgaatcgagattctattcagcgcgcaatcaacgaa aacaaaagtaaccatgacgaccatccaagatcttggatgaggctcaaagt tgatatttttattcccgtcgttgaaaacacaacttacaaaaagtcatcaa tgctttgtaaaaagagtcagtaaTAGAGAAttataacataaagtctgtct attatttcgattcaattaaagtgacatttccataattaaaagtttagtaa ttactgttatacatttggggatcatgtaaaagatttctttcaaaataaac tcatttcaattacacttggaggtgtctggggaattcgtaaatagtaaact gcttatggattattaaccgaaaagctagactggagtcgtttataatgcgt gtaatactaataataccaatactaataataataataatacgggatttagt ttgtataaacgactggaagaatccggtNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNtagtgcacaaaggtttctagacgactaaaattgttccattcattact ttttgctttatttctactatgtatgaattagtcgtctagcttgctagact accgAAAAGCCGGTCTCTCTGGCAAAATATTGACCGAGTTCGCGACGTAT TGGAACGAGCGAAGCGAGGTCCAATACGAGCGAACGAACATTCAAGAGAG ACAGGCTTCCGATGATACACGTTTAATGAAGGAGATCTCTAATAATAATG ATGTTCAATTTCTACAAAACAACCTTGATGTGGTGTATCAATGGACATCA TTAAACAACATGCAGCTCAATGGCTTGAAGTTTGAACATCTTGATACACA ccggtcattaaaatacaaatttaaatcaaattaaAGCAAATCTGATTTAC ATTTAAGTTTATGGATTGCAAAATGTATAATATCTCCCAATCATAGTTTG AACATCTTAATACACACAAAAAAATAACGAACTATAAAAGAATACTCAAA TTACCTCTCAGACACTGGCTCCCCAATCGAAACAAAGATGGATGTGAAGG ATTTAGGAGTCACTCTGGATCTGAACATGACATACAGCAAACATATCACA AACCAGTTCGAGAATGTCAATAGAATTATTGCTTGGAGTTGGAATTTAAG TTTGATTAAAgaaatcaaacttaatcaaacttttaaaagagaattaacct ctgatactcagggtattaCTTACCATCATTTAAAAGTGGCAGAATTATCA GTCAGGGTTGAGTATCTATAAATACCAAAATAGAATTGACCTTCGACCCC AAATGGTAAGTATACTTTACCAATTGAAACTCATTTGTCTATATAACCAT AAAATATCGCACGGCAAGTATACTATTCAGTGATATTCataactttattt ttgaaaaacaatgatccaatttcAATTGGCGAGTCTGAGATGACCCAAAA TTGCGCAACCCAAAAtctttaaaacggcatttttgaGAGCCCACGGGGTC AACAGGGTCAAATACTTAAGTGTATGCTATCCCGATACTATGCGACACAG AATTGAGGGGAGGGGTCAGGGTAGACtagtaaacaaaaaatcaagctcca aataaaaagaatcgaaggggtgaagttgcatctcttttctgaatttcaac gactagaagctacttccctcaaaaaacgttgtttaattttagaacttttt ttaggtttttgcgaatccatccaacttttttgactaaatgatatttcata tcatggaaacatataaataaatgagcatttctaaaaatgcaataaacaga aagagtcccgcacgggtcagacatacagaaatctgtatgtctcctcttac gattttaggtgaagaaaaagaggcgttggaagtagcttctagtcagtggc gttgtggcaggggggccggggggccatggcccccccagcggagctttttt gaaggggtgccgaagagcaaggggcgccaaaagagattttttttaaacgc cccaatcttaaaaatcatacgttatgcgccttaaattgcgcccaggacca actttactgagataattttaaaatactttttttcgctcgcttcgctcgca atacagttTAATtcgtaacttctttgcaatctagctaatttataagtttt tttgtgtatagcattattaaatgaaaaatctaactgcgccccaagaccaa tttgctgacaacaatattgaaatcatagaacatcaattttttcgctcgct tcgctcgcatttcacattgtttctttaagtttcttttcactctagcaagt gtcaaatttgtctatttttatttagtgatttagggtgtcttggcagtcga tttttaaaaattttctagtcggccccaaccatggtggggcctgctgttcc attcatcaaagatatatctactcttctccactaaatatttccttcctcat tatgcctaggcaaatgaattattaaaagtttagaaactggtgggtggggg caccactttggaaaattaaagggggcgccatttaacaaaaattgactttg gcccctccagaaaaattttcccacaacgccactgcttctagtcggttatt ttccttttctctcacgcgcgctgaatatttaattagtgtttacattattt gattgacagttttattataaggttataagtaataaccgactagtttacta gtctaggttCAGGGCGGTATAGCCGATTCCGTAATTCCCGTTAAACCTTC TTAAAAAGACCAAAATTCCCCCTCCCTaaaattcatttgaaattcaagat ttttgtcaAAGATTCCGTgaaattcgaatattttttaccaattccgaaaa tCTGCAACAAAGATTCCTTTATCAGTTATGAGTTATGACCATGTAAAATT TACGGAAGGTGATTGTATGCCTTGTGATCCTTGTGGAATCATCAGCAAAC GTGTTAAACCTGACAGTAACACCAACAAAAGTCagagagcatccagctac ggtgcgtaAGGTTATTCGTTTCAAACTTTGGTACAACAAATCATTTTGAA TTATTCGGTAACTACTAAAGAGAAGGGTCAGGGTCAAAAGTGGATAAATC CAAAGAATGGAGTGTGGCAAGGAGATACAATCATGGTCCGTAATGTTTta ggaaaaaggaaaattcccacgaattttcaaaaccacaaacgatttggaag tataaattaggttggaagggttaGAGTTTTaagttaggttggaagggtta aagttttaactttgagttttaacgctagacttaacacTTAAGACCTCAGA ATCTGAGGacccaaaaattcaaaaatggtgCAAAAAAGGCAcaaaatata gcctggaagtctataaacccgtCCCAAATTGAAACatccgattaaattta agagatggcccaaaatcgactttctcgcccgaactccaaatttcgaaaaa cgaggaaataagctaaattctaaATAGAtgttgaccatgattgtagacaG CTGGGAAAGAGGGAATCTGTCCTCGGGTTTCGTGTTCGAGCtgtggtcgc aaacttactCACTTATACCTAATCAGTCAACTTCCTCCTCGTGTATTCCA GGTTTTATTCACATTACtgattagtgaggttaagtatcgatagatacttc acgacgacggacgaattttctCTAGCCTTCATTCGCGCCAAGCCACTTTT CTACAGGCTGATCGAAAAGCAAGCTAGACTTATCCCGTGTATTATATCCG CTTTGCTTCTAGAACGGAAAATCAAGCGGAAATTCGTTCTGGAAGCAAAG TTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN CGTGGCGCGAATGAAGGCTAGagaaaattcgtccgtcgtcgtgatttatc tatcgatacttaacctcactattgaCGCGCCGCCGAAGACAATACCCTGA CGTAAGCATATCGAAAAGCTGATAACACGCGTAGGGAACGTGGCTGCCAA CTAGTTTTCTTATCGAAAAGCCGAAGGATGTGCTAGGAACGAGGATCTCA ATATTACCTatatcatggaggtataaagaaagacaggagaagtatgctat tgtaaccaagctcgccctacgattaaaaaagttacgatgtatgcatgctc ataatctcatatatcgtgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNCTATAATTTTGCAGCCCCTGTATCTAT CGTGTATCAATCTGTCAATGGAAACTAACTAGCTTATGTATCTGTGGTGT TTTTCTGTGACGGAGATAGTTAGAGtttgatttgtctagatcctgactga TTGAGGACGGCGGTAAATCAGTATTTCAATGGGCCTAAACTGCCGGTTAT CCCAACTCTTTTCAGTCTCTTCGCAGTCCTGCAAATATATAAACTTGCTA CTAAAATAAGCTCCATTTTCAAGATATAATATAATTTCGTTCGTTAaggt aaaatattttgattatgAACTTGTCTCCCGGGAAATTTGATTTGAACACG ACCGTGTGCGAGGATACAAAGTTTGGGTCTCAAAATCGGGCCTTGCAGTC TGACAGTTGTAGAAAAACTTAATGAATTTGTGCACAATCTCTCCCTTAAG ATCTGGAGATCTCGTAATGACGAGATCAGAAATTTTAGGACGGAAGATAT AAAAAATTGGATCCAAATCGAAAAGGGGGTCGATAAAATTTCCTATCTTA ATTGCTGGAATATCAAAAAAGTCTAATGTTTACAGATCTATTAGTGGTTC CTAGTTTGTGATAGAAATGCTTTAGGGGTTTAAGGGGTCAACAAAGCTTT TTCTTCATTGATATCTTTCTGCTACTTAACAGGTAAAACATAAGGACATA TTatagaaagaagaagatggatAAAGTTACTCAAGCTATGGTGGCTCACA AAGCCAGTGCTTTAAAATCTGATATGAAGAGTTTTGGAGGTGGTTTGATA GGAGACGAAAATCCGGAAGATGAGCAACGTGAAAAAGCTGAAACAAAGAG GCGCCATAACTCACTAAAAGATATGGAAGAGCGACGCGAGCGTCAACGAG CAGAACGCCAGGAAGTGCATCGTAAACGAGAGGAAGATCGCGAAAAAGTA CGAAGTGATATTCGTAATAAGTATAAATTGAAAGGAAGTCAAAGTTACGA TGGAAGTTATGGTAATAACAAAGGTTCAAACGAACATCAATTATCTCAAC AAACTGAAGAAATTTGCCAACAGGAGGAAAAAAGCTGTTCTATACAATGA TGAATCTTTAATGCCTTTCCAACGAAATTCCAGTGCATGATATTGGATTT AGGCTCTTACATCTAAAAGAGAGAAATCTAACCCAGTGATAACGGTATCG TGGAATTGATCGCAACGCCAGTTTCTCGCTCGACTACACGACCTATTGCT CCTCGTTCATATATGGAGTGTTTGGAATCGAGACAGCCTCGTTTTAACAT GGTGCTCATCAAAGTCCAATTCTTTGAGTTCGATACAATTTTGTATCCCT CAATGCAATAATATTTATCTTTCCGATTTGGTTGTATTTATTAAATTGTa tattttcgggaaaaaaaCTATTATTTTGTACTACAGTGTGTCCTGTTGAA AGTTTCAAAggtaaaattaaattcaaaaggatatatattcttttttattg AATAGCTATACAATGGAG

Coding sequence (CDS) from alignment at sc0000549:179269..188386+

>TCONS_00025833 ID=TCONS_00025833|Name=TCONS_00025833|organism=Clytia hemisphaerica|type=CDS|length=384bp|location=Sequence derived from alignment at sc0000549:179269..188386+ (Clytia hemisphaerica)
atggatAAAGTTACTCAAGCTATGGTGGCTCACAAAGCCAGTGCTTTAAA
ATCTGATATGAAGAGTTTTGGAGGTGGTTTGATAGGAGACGAAAATCCGG
AAGATGAGCAACGTGAAAAAGCTGAAACAAAGAGGCGCCATAACTCACTA
AAAGATATGGAAGAGCGACGCGAGCGTCAACGAGCAGAACGCCAGGAAGT
GCATCGTAAACGAGAGGAAGATCGCGAAAAAGTACGAAGTGATATTCGTA
ATAAGTATAAATTGAAAGGAAGTCAAAGTTACGATGGAAGTTATGGTAAT
AACAAAGGTTCAAACGAACATCAATTATCTCAACAAACTGAAGAAATTTG
CCAACAGGAGGAAAAAAGCTGTTCTATACAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014520XLOC_014520Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025833-proteinTCONS_00025833-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025833-exon-sc0000549-1491911889:179269..179880TCONS_00025833-exon-sc0000549-1491911889:179269..179880Clytia hemisphaericaexon
TCONS_00025833-exon-sc0000549-1510915933:179269..179880TCONS_00025833-exon-sc0000549-1510915933:179269..179880Clytia hemisphaericaexon
TCONS_00025833-exon-sc0000549-1575043694:179269..179880TCONS_00025833-exon-sc0000549-1575043694:179269..179880Clytia hemisphaericaexon
TCONS_00025833-exon-sc0000549-1491911889:187551..188386TCONS_00025833-exon-sc0000549-1491911889:187551..188386Clytia hemisphaericaexon
TCONS_00025833-exon-sc0000549-1510915933:187551..188386TCONS_00025833-exon-sc0000549-1510915933:187551..188386Clytia hemisphaericaexon
TCONS_00025833-exon-sc0000549-1575043694:187551..188386TCONS_00025833-exon-sc0000549-1575043694:187551..188386Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000549supercontigsc0000549:179269..188386 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.25679 2.5221 2.71219 1.79287 1.65882 0.853992 2.61601 3.4286 1.03655 1.41909 0.80701 1.10165 0.602795 0.447149 0.22057 0.197255 0.777606 0.700371 0.963487 0.576125 2.39322 1.42472 1.39705 1.01229 0.947497 1.11663 0 0.18948 0.502998 0.658896
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR008849Synaphin
Vocabulary: Molecular Function
TermDefinition
GO:0019905syntaxin binding
Vocabulary: Biological Process
TermDefinition
GO:0006836neurotransmitter transport
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006836 neurotransmitter transport
molecular_function GO:0019905 syntaxin binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025833 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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