XLOC_014520 (gene) - C. hemisphaerica

Overview


Name	XLOC_014520
Unique Name	XLOC_014520
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000549:179269..188386+

gene from alignment at sc0000549:179269..188386+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_014520 ID=XLOC_014520|Name=XLOC_014520|organism=Clytia hemisphaerica|type=gene|length=9118bp|location=Sequence derived from alignment at sc0000549:179269..188386+ (Clytia hemisphaerica)
gcaaggctgaaagccacacaAATATGGTTCATCcaataaaaggaagttca
ttctatggtggtatatcttgaagtgaaggtggttgaacaaacaaaatgtt
tttggcatattgatgtaactgacggTATGATATATAACTGACAAGAGAAA
CATAAATTGACTAGGAATCGAGGTAGATCGCAAGAAAGCCTGATAAATCC
ACAGATGGCAGCAGGAATTCTCTGACAAGAGAAATGTAAATCAAAGAATA
AGGGAACCCGCCCCGCAGGAGAGGAAAATCTGATTAACCTTGTTATAAAG
GATGATGACCTCCCTTGCAGTGCAATTGACAACAACTTACTTACTCTCAT
GTATACAAAACCAACTGAGGTGAACGATGATCCAAATAAGGAAAACTTCC
ATCGTTCATaatcaaattgaaacaaaaatatataGGTAATAAGTGAAAGA
TTTTGATGCatgtctttttcatttttggtcgccatctttgtttccgcatg
tttgtttttcttttccagcaATTCCGGAAGATTTGTTTCTGCCTGGTCAG
TTCAGAATACGGAACTATAGAGCGGAATTCGGGTTGCGCACGCAACCGAC
GACTATGAACAGGTATGAGCTACACTTAAGGGTACctcttttttgtcttt
tagaCTTCCAAAGTCCCCCACTAACGCACGGctggaaaaattagaaaatc
taaTTTCCGAATTTCAGTCCTTCTAAGCCAATATGTCAAAGATTTTGTTC
TCTGCTGAAGTTTCACTTCCCCTCACTTGTgaagaaaaactaaaagaatA
TTATTGCGCCTGTCTGTGATGTCATTACATACAATacagtattttttcaa
agaatcgagCATGGAGAATAAGTTATCGGGGAAAACTcagtcggggaaaa
attcgtcacttgctggttgTTGGTAAAcacattaaggccggggaaaattt
tcgtcgaggaaaatattcgtcacttgtccaaaatttcatcacttttcccc
gacgaagttttccccgataaggtaaataTCACGCACTAGGAAATGTGTAA
TATACTATGTACgttatcaaaataaattacTGATTAGTTGAGAAGCAATT
AAATGACGCGGTAGCAAAGTTTAATTTTAAGATGATCATGCTACCAAGCC
CTTTTTCCGAGGTCGAAAATAGGCCAAGTGGAGTTTTATCAAATATCAGA
CTTTCCAGGgagttttttgctttaaaccCTGTAGCTACCATTGGTTAAGC
TTACTTACCTACCGTGAAttaccgtgaatagcacaggtcaaaatcaaata
ttgaaactgtgccgacgaatcgagattctattcagcgcgcaatcaacgaa
aacaaaagtaaccatgacgaccatccaagatcttggatgaggctcaaagt
tgatatttttattcccgtcgttgaaaacacaacttacaaaaagtcatcaa
tgctttgtaaaaagagtcagtaaTAGAGAAttataacataaagtctgtct
attatttcgattcaattaaagtgacatttccataattaaaagtttagtaa
ttactgttatacatttggggatcatgtaaaagatttctttcaaaataaac
tcatttcaattacacttggaggtgtctggggaattcgtaaatagtaaact
gcttatggattattaaccgaaaagctagactggagtcgtttataatgcgt
gtaatactaataataccaatactaataataataataatacgggatttagt
ttgtataaacgactggaagaatccggtNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNtagtgcacaaaggtttctagacgactaaaattgttccattcattact
ttttgctttatttctactatgtatgaattagtcgtctagcttgctagact
accgAAAAGCCGGTCTCTCTGGCAAAATATTGACCGAGTTCGCGACGTAT
TGGAACGAGCGAAGCGAGGTCCAATACGAGCGAACGAACATTCAAGAGAG
ACAGGCTTCCGATGATACACGTTTAATGAAGGAGATCTCTAATAATAATG
ATGTTCAATTTCTACAAAACAACCTTGATGTGGTGTATCAATGGACATCA
TTAAACAACATGCAGCTCAATGGCTTGAAGTTTGAACATCTTGATACACA
ccggtcattaaaatacaaatttaaatcaaattaaAGCAAATCTGATTTAC
ATTTAAGTTTATGGATTGCAAAATGTATAATATCTCCCAATCATAGTTTG
AACATCTTAATACACACAAAAAAATAACGAACTATAAAAGAATACTCAAA
TTACCTCTCAGACACTGGCTCCCCAATCGAAACAAAGATGGATGTGAAGG
ATTTAGGAGTCACTCTGGATCTGAACATGACATACAGCAAACATATCACA
AACCAGTTCGAGAATGTCAATAGAATTATTGCTTGGAGTTGGAATTTAAG
TTTGATTAAAgaaatcaaacttaatcaaacttttaaaagagaattaacct
ctgatactcagggtattaCTTACCATCATTTAAAAGTGGCAGAATTATCA
GTCAGGGTTGAGTATCTATAAATACCAAAATAGAATTGACCTTCGACCCC
AAATGGTAAGTATACTTTACCAATTGAAACTCATTTGTCTATATAACCAT
AAAATATCGCACGGCAAGTATACTATTCAGTGATATTCataactttattt
ttgaaaaacaatgatccaatttcAATTGGCGAGTCTGAGATGACCCAAAA
TTGCGCAACCCAAAAtctttaaaacggcatttttgaGAGCCCACGGGGTC
AACAGGGTCAAATACTTAAGTGTATGCTATCCCGATACTATGCGACACAG
AATTGAGGGGAGGGGTCAGGGTAGACtagtaaacaaaaaatcaagctcca
aataaaaagaatcgaaggggtgaagttgcatctcttttctgaatttcaac
gactagaagctacttccctcaaaaaacgttgtttaattttagaacttttt
ttaggtttttgcgaatccatccaacttttttgactaaatgatatttcata
tcatggaaacatataaataaatgagcatttctaaaaatgcaataaacaga
aagagtcccgcacgggtcagacatacagaaatctgtatgtctcctcttac
gattttaggtgaagaaaaagaggcgttggaagtagcttctagtcagtggc
gttgtggcaggggggccggggggccatggcccccccagcggagctttttt
gaaggggtgccgaagagcaaggggcgccaaaagagattttttttaaacgc
cccaatcttaaaaatcatacgttatgcgccttaaattgcgcccaggacca
actttactgagataattttaaaatactttttttcgctcgcttcgctcgca
atacagttTAATtcgtaacttctttgcaatctagctaatttataagtttt
tttgtgtatagcattattaaatgaaaaatctaactgcgccccaagaccaa
tttgctgacaacaatattgaaatcatagaacatcaattttttcgctcgct
tcgctcgcatttcacattgtttctttaagtttcttttcactctagcaagt
gtcaaatttgtctatttttatttagtgatttagggtgtcttggcagtcga
tttttaaaaattttctagtcggccccaaccatggtggggcctgctgttcc
attcatcaaagatatatctactcttctccactaaatatttccttcctcat
tatgcctaggcaaatgaattattaaaagtttagaaactggtgggtggggg
caccactttggaaaattaaagggggcgccatttaacaaaaattgactttg
gcccctccagaaaaattttcccacaacgccactgcttctagtcggttatt
ttccttttctctcacgcgcgctgaatatttaattagtgtttacattattt
gattgacagttttattataaggttataagtaataaccgactagtttacta
gtctaggttCAGGGCGGTATAGCCGATTCCGTAATTCCCGTTAAACCTTC
TTAAAAAGACCAAAATTCCCCCTCCCTaaaattcatttgaaattcaagat
ttttgtcaAAGATTCCGTgaaattcgaatattttttaccaattccgaaaa
tCTGCAACAAAGATTCCTTTATCAGTTATGAGTTATGACCATGTAAAATT
TACGGAAGGTGATTGTATGCCTTGTGATCCTTGTGGAATCATCAGCAAAC
GTGTTAAACCTGACAGTAACACCAACAAAAGTCagagagcatccagctac
ggtgcgtaAGGTTATTCGTTTCAAACTTTGGTACAACAAATCATTTTGAA
TTATTCGGTAACTACTAAAGAGAAGGGTCAGGGTCAAAAGTGGATAAATC
CAAAGAATGGAGTGTGGCAAGGAGATACAATCATGGTCCGTAATGTTTta
ggaaaaaggaaaattcccacgaattttcaaaaccacaaacgatttggaag
tataaattaggttggaagggttaGAGTTTTaagttaggttggaagggtta
aagttttaactttgagttttaacgctagacttaacacTTAAGACCTCAGA
ATCTGAGGacccaaaaattcaaaaatggtgCAAAAAAGGCAcaaaatata
gcctggaagtctataaacccgtCCCAAATTGAAACatccgattaaattta
agagatggcccaaaatcgactttctcgcccgaactccaaatttcgaaaaa
cgaggaaataagctaaattctaaATAGAtgttgaccatgattgtagacaG
CTGGGAAAGAGGGAATCTGTCCTCGGGTTTCGTGTTCGAGCtgtggtcgc
aaacttactCACTTATACCTAATCAGTCAACTTCCTCCTCGTGTATTCCA
GGTTTTATTCACATTACtgattagtgaggttaagtatcgatagatacttc
acgacgacggacgaattttctCTAGCCTTCATTCGCGCCAAGCCACTTTT
CTACAGGCTGATCGAAAAGCAAGCTAGACTTATCCCGTGTATTATATCCG
CTTTGCTTCTAGAACGGAAAATCAAGCGGAAATTCGTTCTGGAAGCAAAG
TTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
CGTGGCGCGAATGAAGGCTAGagaaaattcgtccgtcgtcgtgatttatc
tatcgatacttaacctcactattgaCGCGCCGCCGAAGACAATACCCTGA
CGTAAGCATATCGAAAAGCTGATAACACGCGTAGGGAACGTGGCTGCCAA
CTAGTTTTCTTATCGAAAAGCCGAAGGATGTGCTAGGAACGAGGATCTCA
ATATTACCTatatcatggaggtataaagaaagacaggagaagtatgctat
tgtaaccaagctcgccctacgattaaaaaagttacgatgtatgcatgctc
ataatctcatatatcgtgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNCTATAATTTTGCAGCCCCTGTATCTAT
CGTGTATCAATCTGTCAATGGAAACTAACTAGCTTATGTATCTGTGGTGT
TTTTCTGTGACGGAGATAGTTAGAGtttgatttgtctagatcctgactga
TTGAGGACGGCGGTAAATCAGTATTTCAATGGGCCTAAACTGCCGGTTAT
CCCAACTCTTTTCAGTCTCTTCGCAGTCCTGCAAATATATAAACTTGCTA
CTAAAATAAGCTCCATTTTCAAGATATAATATAATTTCGTTCGTTAaggt
aaaatattttgattatgAACTTGTCTCCCGGGAAATTTGATTTGAACACG
ACCGTGTGCGAGGATACAAAGTTTGGGTCTCAAAATCGGGCCTTGCAGTC
TGACAGTTGTAGAAAAACTTAATGAATTTGTGCACAATCTCTCCCTTAAG
ATCTGGAGATCTCGTAATGACGAGATCAGAAATTTTAGGACGGAAGATAT
AAAAAATTGGATCCAAATCGAAAAGGGGGTCGATAAAATTTCCTATCTTA
ATTGCTGGAATATCAAAAAAGTCTAATGTTTACAGATCTATTAGTGGTTC
CTAGTTTGTGATAGAAATGCTTTAGGGGTTTAAGGGGTCAACAAAGCTTT
TTCTTCATTGATATCTTTCTGCTACTTAACAGGTAAAACATAAGGACATA
TTatagaaagaagaagatggatAAAGTTACTCAAGCTATGGTGGCTCACA
AAGCCAGTGCTTTAAAATCTGATATGAAGAGTTTTGGAGGTGGTTTGATA
GGAGACGAAAATCCGGAAGATGAGCAACGTGAAAAAGCTGAAACAAAGAG
GCGCCATAACTCACTAAAAGATATGGAAGAGCGACGCGAGCGTCAACGAG
CAGAACGCCAGGAAGTGCATCGTAAACGAGAGGAAGATCGCGAAAAAGTA
CGAAGTGATATTCGTAATAAGTATAAATTGAAAGGAAGTCAAAGTTACGA
TGGAAGTTATGGTAATAACAAAGGTTCAAACGAACATCAATTATCTCAAC
AAACTGAAGAAATTTGCCAACAGGAGGAAAAAAGCTGTTCTATACAATGA
TGAATCTTTAATGCCTTTCCAACGAAATTCCAGTGCATGATATTGGATTT
AGGCTCTTACATCTAAAAGAGAGAAATCTAACCCAGTGATAACGGTATCG
TGGAATTGATCGCAACGCCAGTTTCTCGCTCGACTACACGACCTATTGCT
CCTCGTTCATATATGGAGTGTTTGGAATCGAGACAGCCTCGTTTTAACAT
GGTGCTCATCAAAGTCCAATTCTTTGAGTTCGATACAATTTTGTATCCCT
CAATGCAATAATATTTATCTTTCCGATTTGGTTGTATTTATTAAATTGTa
tattttcgggaaaaaaaCTATTATTTTGTACTACAGTGTGTCCTGTTGAA
AGTTTCAAAggtaaaattaaattcaaaaggatatatattcttttttattg
AATAGCTATACAATGGAG

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00025833	TCONS_00025833	Clytia hemisphaerica	transcript
TCONS_00025834	TCONS_00025834	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00025833-protein	TCONS_00025833-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000549	supercontig	sc0000549:179269..188386 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
48.06	52.47	28.19	20.99	8.93	5.25	29.51	30.16	25.05	29.53	7.28	14.22	8.43	8.83	0.58	1.38	10.75	9.17	9.82	9.08	19.41	19.39	27.14	23.39	12.13	9.59	1.48	2.1	8.04	9.35

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XLOC_014520 (gene) - C. hemisphaerica