TCONS_00025489 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025489
Unique NameTCONS_00025489
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length153

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025489 ID=TCONS_00025489|Name=TCONS_00025489|organism=Clytia hemisphaerica|type=transcript|length=153bp
GGGTAAGGTTCTTTTCCTTCATATGCAGTAGTCTTGAGCAAGATTGTATT
GAGTGAGCCTCGCAAAATGAACttatttgttattgttttattttcgtTCA
CTTTGGCGCTTCATCTGTTCATACTTGAAGCCACTCATTATTCAATAATC
GCA
Run BLAST on NCBI

transcript from alignment at sc0000536:56482..56634

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025489 ID=TCONS_00025489|Name=TCONS_00025489|organism=Clytia hemisphaerica|type=transcript|length=153bp|location=Sequence derived from alignment at sc0000536:56482..56634 (Clytia hemisphaerica)
TGCGATTATTGAATAATGAGTGGCTTCAAGTATGAACAGATGAAGCGCCA
AAGTGAacgaaaataaaacaataacaaataaGTTCATTTTGCGAGGCTCA
CTCAATACAATCTTGCTCAAGACTACTGCATATGAAGGAAAAGAACCTTA
CCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014305XLOC_014305Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025489-exon-sc0000536-1491911889:56482..56634TCONS_00025489-exon-sc0000536-1491911889:56482..56634Clytia hemisphaericaexon
TCONS_00025489-exon-sc0000536-1510915933:56482..56634TCONS_00025489-exon-sc0000536-1510915933:56482..56634Clytia hemisphaericaexon
TCONS_00025489-exon-sc0000536-1575043694:56482..56634TCONS_00025489-exon-sc0000536-1575043694:56482..56634Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000536supercontigsc0000536:56482..56634 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025489 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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