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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025150 ID=TCONS_00025150|Name=TCONS_00025150|organism=Clytia hemisphaerica|type=transcript|length=2644bp
GTGACACTTCAAAATGGTAGTCTTGTTGCACGAAAACAATGATTTTCGAA
TTTCGTCATTGACATTGGAATCTTTGCAGGAATTCGAACGTTTGAGTATT
CGAACAAACGGAGATTCGAACGTTTAAACAATTTCGAATGTTTCAAAGAT
TCCAAAATGTTGAGCTTGCTAATGTCGGTCAGCTCTCAGCCCAGCACACG
AACGCAACTTCGAATGGGCAACATTTTTCTTGACAAAGAATACATATTAT
ACAACAACAATGGATGCAGAAGCGGATTTTGAAATTGATACAAATCTGTT
TGGTCGAAGCCTTCCATTTGATATGATACGAAAGACAACATCCCCTCCGT
TACCGAGTAATCGAAACCAACCAAACGAACATCGAGGAAAATTCCAAGCT
GATTTTCAAAGGATGTCAAATGCAGCTGCTCTTCCTAAATCAAATGGTCC
TCTCGTCAACGCACCTGCCAACCCACCAAGAAACAGCACGTCGACGATAC
AACCAAAACCAATTATTGTCGAGGATTCGAAAATTTCTCCTAAATGTGCT
CGCTGTCGGAATCACGGCGAAGTAACATCAATAAAGGGTCACAAGAATAA
TTGTCCTTGGCGTCTCTGCCGTTGCAAGAAATGTTTAGCTGTTTTAAACA
GACAACGCGTAATGGCAAAACAAATCAAGACACGCAGAAGAGCAGCCAAG
CTTAAAGCTAAATTTCTGCTCAACCCAGTTTTTTCAGTGAAGCTAAACGA
GAAAGCGATGGCTACAGCTCTCCATCCCGCAGAAACAACAACTGATCAAA
GACCTACAATCCCTCTCTCAAGCCAACTTCTAACAAACGGCAGCAAACGT
CCCTCGTTACCTCTCAAATATACTTTCATTGACACACAAAACAAACGTTC
AACAGTTGATGATTTATCTCCCAAATATTCCACACCCGTAATGGCTTCAA
CACCGTCATCCAGCATGGAAACAACACCAAACCCTAACACATTTTTATCT
CCTAAAACTCAAACTTATTTCACACCTGTGGCCACTTTACCTTCCACCAA
CAAAGTCACACCTTTGAAGAATGTGGAAAATCTGGCACCATCATCTTCAC
TCAATAACAATCAGTATCAGAAAGCCAACAATGTACCATCAAATAAGATG
CCACATTTATCACCTCCAAAATACATCTCTCCAGAAGACTTGCAAAAAGC
GTTACCATCAACCGCTCATTTTGTACTCAAACAAAACCACTTTGACCAGT
ACCCTCCTCAACACAAAGATCGTGTGATACCTTCTCCAACTTTTAACAAC
AATGCGCATGCGTCAACATATTTTCCTGCCAAAGATAACCTTTACTCGAC
GCATCAAACACAACGCCAAAACATTAACGCCCATTATCGGGCGCCCTATC
ACCGCAGGAATGATGAGAGCAGTAACCATCAGCAACAGACCACATCACTT
CTCTCCTCGCATAACCATCAAACTACGGTTCCTTACGATTCAAATTATGA
TCGTCTTATGGTATGTCTACGTTTTATTTTTTGCCATTTCTCTGAAAACC
TAATATCTAACGTTTTATCAGACGTGCAGTATGATATCACGACTGCGTTG
GAATGTCTCTTAAAGTATGAAGGCATACGACAACATAACGTTCAATTACG
TCATGCCATCACATCCACTCAACCACTATCACATTACCAACAACTAAACC
ATCAATATAGGCCAGCAAATGTTCAACAGCAAACAGTTAACAATCAACAC
CCTCCTCCGCTATTACGTCAACCGCCCTATCCATTACGTCATAATACATC
AAGTCCTCCACCCTCACTGACGCCCTATCAGAATTTTCAACGACAATCTC
AAACGCCCTGCACATATACGCAACCAGCAGTTAACGCCATCTCACAGCCC
TCTCAAACAACGTACTTAAACGAAGAGCACTACAGTGAAACTTCCAGTGA
TTACACTTGTTCCTCTTACGAACCGCCCTCGAACGCCCTTGACCCTGGAC
ATGGACCTACCCGTTATACAAACACCCTTCCAGGTGCAGGGCAGGAATTA
AACTCCCTGGAACCATCGCAAGTTGGGCATTCGTATTATTGATCAAAACA
GCATTTGGTTCCTTCGCTCGATCTTTATTGTTCGTTATGTTCCTTGCTAA
ACACCACTTTGGCTTAATATTATTTTATTGGTTGATGCGATGAAATACTT
CTTATTTTCATGACCAAAAATTGTTCCCTTTGCTTTGGATTTGTGGATTA
TGCCTGGAACGTTCTGATATCGTCTtataaaattcaacaaaaaaggTATT
TATTTAAGTCTGGAGTAGGGTCTGGGGGAAATGGATCGAGTCGCGAGtcc
tttggtttttatttttcgcCTCGTATTATTTCACTTTCCCCAGATTCCTT
AAAAGTATTTTGCATTTGTtattatttatcaattttttgatattatttat
caattttttgatattatttattGAGTTCATTCATTGTCATGGATTCAAgc
atcattcattcattcattttttatacTCATTCGttcattgtttttgtttt
gaacaaaAGCCCAggcactggattttttaacaacACATTTATTGGGTATT
GATCTTAAAATATATACATGAATTTTATggtgaaattttagaaa Run BLAST on NCBI protein sequence of TCONS_00025150-protein >TCONS_00025150-protein ID=TCONS_00025150-protein|Name=TCONS_00025150-protein|organism=Clytia hemisphaerica|type=polypeptide|length=610bp
MDAEADFEIDTNLFGRSLPFDMIRKTTSPPLPSNRNQPNEHRGKFQADFQ
RMSNAAALPKSNGPLVNAPANPPRNSTSTIQPKPIIVEDSKISPKCARCR
NHGEVTSIKGHKNNCPWRLCRCKKCLAVLNRQRVMAKQIKTRRRAAKLKA
KFLLNPVFSVKLNEKAMATALHPAETTTDQRPTIPLSSQLLTNGSKRPSL
PLKYTFIDTQNKRSTVDDLSPKYSTPVMASTPSSSMETTPNPNTFLSPKT
QTYFTPVATLPSTNKVTPLKNVENLAPSSSLNNNQYQKANNVPSNKMPHL
SPPKYISPEDLQKALPSTAHFVLKQNHFDQYPPQHKDRVIPSPTFNNNAH
ASTYFPAKDNLYSTHQTQRQNINAHYRAPYHRRNDESSNHQQQTTSLLSS
HNHQTTVPYDSNYDRLMVCLRFIFCHFSENLISNVLSDVQYDITTALECL
LKYEGIRQHNVQLRHAITSTQPLSHYQQLNHQYRPANVQQQTVNNQHPPP
LLRQPPYPLRHNTSSPPPSLTPYQNFQRQSQTPCTYTQPAVNAISQPSQT
TYLNEEHYSETSSDYTCSSYEPPSNALDPGHGPTRYTNTLPGAGQELNSL
EPSQVGHSYY Run BLAST on NCBI transcript from alignment at sc0000521:183034..191678- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025150 ID=TCONS_00025150|Name=TCONS_00025150|organism=Clytia hemisphaerica|type=transcript|length=8645bp|location=Sequence derived from alignment at sc0000521:183034..191678- (Clytia hemisphaerica)
GTGACACTTCAAAATGGTAGTCTTGTTGCACGAAAACAATGATTTTCGAA
TTTCGTCATTGACATTGGAATCTTTGCAGGAATTCGAACGTTTGAGTATT
CGAACAAACGGAGATTCGAACGTTTAAACAATTTCGAATGTTTCAAAGAT
TCCAAAATGTTGAGCTTGCTAATGTCGGTCAGCTCTCAGCCCAGCACACG
AACGCAACTTCGAATGGGCAACATTTTTCTTGACAAAGAATACATATTAT
ACAACAACAATGGATGCAGAAGCGGATTTTGAAATTGATACAAATCTGTT
TGGTCGAAGCCTTCCATTTGATATGATACGAAAGACAACATCCCCTCCGT
TACCGAGTAATCGAAACCAACCAAACGAACATCGAGGAAAATTCCAAGCT
GATTTTCAAAGGATGTCAAGTAAGATTTTTCTTTTTTATTACGAGATACA
GCATTTCACGTTTGAACCTACGACCGACGACGTATTAAAAAAGCTTCGTT
TTTTGACCTAGAGCTTTTTGTGTTAGTAATTTCTTTGAGGGCAATTTGGG
AAAAATTGCCCGAGGATTATTTTGACGTTTTTCTTGATTGCCGGAATGAA
GTGACGGGCAACTTTTCTAAAAACTCAGGCAAATAAGCAGTCGGGTTAGA
CATACTTCCGGGCTGATCACATTTTGTCTGGACTCGCACTGTTTTGTTTT
CGGAATAGAAAATGTCGAACTTGTGAGATTTATACAAAACATATTCCTTA
TGTCTCATGTTTTCAGATGCAGCTGCTCTTCCTAAATCAAATGGTCCTCT
CGTCAACGCACCTGCCAACCCACCAAGAAACAGCACGTCGACGATACAAC
CAAAACCAATTATTGTCGAGGATTCGAAAATTTCTCCTAAATGTGCTCGC
TGTCGGAATCACGGCGAAGTAACATCAATAAAGGGTCACAAGAATAATTG
TCCTTGGCGTCTCTGCCGTTGCAAGAAATGTTTAGCTGTTTTAAACAGAC
AACGCGTAATGGCAAAACAAATCAAGACACGCAGAAGAGCAGCCAAGCTT
AAAGCTAAATTTCTGCTCAACCCAGGTAATTCATTTTGCTATTTTTTGAT
ATTTTGTAGAAAGTCTGATTAGATCTTCAAAGGATTTATCTGGATTGGAA
TACCACAGGAGTAATCATTCTAGGGAACAATATCAATTATGTTGCGCGTA
GATTATTTTTTTGGGGACTTTTTTTAGATCTGAGATGTTTGTCAGTGATT
TCTCAGGAGATGCTCAGGATATTTTAATTTTTTTTGAGGCCAAAGATTTT
ATACATTTTTTCGGAAATTCTTGGAATATTTTGGAGGTTTCAGGGATTTA
CTTTTTTTTTTTGAAAGAGTGTTGGTTTACATTTTAGAAGAATCANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNCAAGTAATGGCGGGTGAAAGCAAGTTCGATATTTGACGATACA
TAATCTCGCTTGTGTAGAGACAAAACCTGCTATGACGTCACACACGTTTA
CGTGACTTACGCTCTTGTCACACCACATGTTCGAAAAGTTATTACATTTC
GAATGTTGCAAAATTCGAACGACCTTCGAGAATTTTTTTCGGAAAGTGCA
GACGGTTGTTTTCTTTTGGTGGGTGTGGTCCGGTGTTTGCTCCAAAACTG
AATGTTATAAAATTTTGAAAAAATAAACTAAACTAAGTTTTTCTTGCTTG
TTGAGTGAGTATGTATTTGATCGCCAAATGTTTTAGGTATCTAAATATTT
TTGTAGTTTCGAAGAGAAAGGTTTTATTATTGCGGGCAAGAATTTTTTAT
TCTGATTTTCACACTTTGTATATATTTAAAATTCTTTGACAGGGCTAGGA
GTCCACAAAGGAAGGGGGAGGAAAATGTACATAAGGAGTAGTCTTTAAGT
GTCCAGATATTCTTGGGATTTTTCCAAAGACTTAATTTTAGTGTTTGAAA
TTTTATCAAGATTTTCTTTTCGGAATTTTTAAATTTTGTTTGGGATATTG
GAATGCTATCTTCGAGAAAGTCAGGGAAGAAATATGCTCGATTTTTGGGG
AATTTAATATTGGATATTTTAATTTTTGGGCTTGTTCTGGGCTCTTCTTG
AAGTTTATATGGATTTCTTTGGTATGTAAAGGTTTATTTCAGGGCGTTCA
GGGTGACAAAATGGTAGCAACAAAGGCTAATAAAAGTCAAGGCTACTTTA
CAATTAAAAAAAGCCAATCTTATGTTGGCAGCTCATCGTCGCTGCTACTG
AGGCTAGATATTGACAGCTTTTGGTTGGCAAAGTTTTTGTTTGTTTTTAT
CAAACGAAGGTTATCTGTTCTGGGACTTCCTCTCACACGCCAAATGAAAT
CTCCATCACATTCGGAGTTCCATTTCTTAGCTTTTTTGCACATATTTTTG
ATTTTTCTCCTTTCATTTATGGTGAAATCATCGGTGATAATATCCAAACC
ACTCCAACTTTATTGTCGATATCTTTGAGCAGATCTACAATTTCCTTTTT
ATCCTCTTCTTGATCGTTTTCTTTAGTTTCTTCAATTTGTTCAGGGAGTC
CATGTATTATGATGTTTCTTTTCCTTGATTCGATATCTTGTTTTTCTCTC
CTCTCCTCTTCTTTTTGTTCCGCAACAACAGATTGAAAAATTTCCTTGTG
TGCTTTGGTTATACCAGCGTAGGTTTTACTGGATGACTCTTTCATAAAAT
CTTTTGTCTGTTGTATCTCTTCTTTTTCCTTGTTTTAGGTTCTAAGCCGT
TCATCTTTTCTGTTAGGATTTTGTCGATGTCGTTGTTGATTGAGTTTTTT
GATTTCGTCGCCTTTCTTAGCAATCTCCTTTTGCATGATGATATGGTACG
TGTTTTCTCCGATTTTAAGGATCTCGTTATTCGCACACATATTGAATATT
ATAATTAGTGTTAGCGAAGATTTGCTAATTTTTCATTGTCTTTGAAGAAA
TTGCACATTGTTGAGCACGTTTAATTTTTTTTGCAGTATTTAGGTANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCAATGATATTAGA
ACTTTCTCATATTTCTAATAGAAGAACGACCCTCTAGAGGACACAAAAAA
TTAAAAAAACAAGGAAATGCATGGTTTTTACAAATGTAACTATTTAGTAT
TGTCCAAGTGTTAGCATAACTGCTTAAGGGGGTCAAAAATCTGATAAAAT
ACTTTAATAGTTATGTCCGCAACATACAACTTGCTACAGAACATGACTCT
GTTTTGAACTATTGGAGCAATTCTAACCAGTCTGTAAGTGAATGTGTAGT
AGATTATGTTGTGTGAACACTACACAATGAATTTAATATGCANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGGTA
GAAGATTGCTAAGAAAAACAGCTAGAATCAAGGTTCTCTGGCATGCGTTT
AAAATGGATCTCTATTGTTGTAGTTTTGAAAAAAGCTGCATAATTAGTTT
TGTGGTTTGGTGCAACGAAATTCTTTTGTTTTTAGGCCTAATTATACGAA
AATGATGGGTACACCAGACTTAAATTCGCAGAAATTTTTTCGAAATAAAT
TACATCAATTTTTAGGCTACAAATTGGTGTGAGATCTGGTGAAATTATTT
ACTGAATACTAAAAGGGCTTCATCGTGACAATTCCGTGCACTTACTAAAA
TTTCATTAAAATACGACCAATCTTGCCGTCCACAACCCCAACCTTACCGG
TTAGTTTGTCCACCCTACGATTTCATTCCTCTTCGTTCATTACAAAGATT
AACAACTTGTGGATTTAAAACACCCCTTTGTAACAGCCTACTGTAAAGTT
TGGCAAAAATTTCGTCCCCGGTGGAAAAAAACCCTGACTTTGATTTCGTC
CCCATTCGAAATTCCATGTTTAAAAATTACACTCCAAAACCATCCCACTG
GGTTTTTTAACCTTCGAATAATAGAATCTCTATTGGGATTTGAAAAACGT
TCCACCAGGGCTGTGAGACGGGGGTGTTTTAAAGAACGATAAAGTACGCA
ATCGTGTCACTAATGCAGGGATTGTCAGTCGAACCCACTGTAATAGTTCA
AAGAAAAATCGACCGAAATGAAAAGCATCAGCCCACAAAAACAGCAATTT
ATATTTTGTTTTAAGAATTAATTTATTTCGTGATTTTTTATTTTATGACT
TAAATTAACCTCAAATATTTCCGTTCCAGTTTTTTCAGTGAAGCTAAACG
AGAAAGCGATGGCTACAGCTCTCCATCCCGCAGAAACAACAACTGATCAA
AGACCTACAATCCCTCTCTCAAGCCAACTTCTAACAAACGGCAGCAAACG
TCCCTCGTTACCTCTCAAATATACTTTCATTGACACACAAAACAAACGTT
CAACAGTTGATGATTTATCTCCCAAATATTCCACACCCGTAATGGCTTCA
ACACCGTCATCCAGCATGGAAACAACACCAAACCCTAACACATTTTTATC
TCCTAAAACTCAAACTTATTTCACACCTGTGGCCACTTTACCTTCCACCA
ACAAAGTCACACCTTTGAAGAATGTGGAAAATCTGGCACCATCATCTTCA
CTCAATAACAATCAGTATCAGAAAGCCAACAATGTACCATCAAATAAGAT
GCCACATTTATCACCTCCAAAATACATCTCTCCAGAAGACTTGCAAAAAG
CGTTACCATCAACCGCTCATTTTGTACTCAAACAAAACCACTTTGACCAG
TACCCTCCTCAACACAAAGATCGTGTGATACCTTCTCCAACTTTTAACAA
CAATGCGCATGCGTCAACATATTTTCCTGCCAAAGATAACCTTTACTCGA
CGCATCAAACACAACGCCAAAACATTAACGCCCATTATCGGGCGCCCTAT
CACCGCAGGAATGATGAGAGCAGTAACCATCAGCAACAGACCACATCACT
TCTCTCCTCGCATAACCATCAAACTACGGTTCCTTACGATTCAAATTATG
ATCGTCTTATGGTATGTCTACGTTTTATTTTTTGCCATTTCTCTGAAAAC
CTAATATCTAACGTTTTATCAGACGTGCAGTATGATATCACGACTGCGTT
GGAATGTCTCTTAAAGTATGAAGGCATACGACAACATAACGTTCAATTAC
GTCATGCCATCACATCCACTCAACCACTATCACATTACCAACAACTAAAC
CATCAATATAGGCCAGCAAATGTTCAACAGCAAACAGTTAACAATCAACA
CCCTCCTCCGCTATTACGTCAACCGCCCTATCCATTACGTCATAATACAT
CAAGTCCTCCACCCTCACTGACGCCCTATCAGAATTTTCAACGACAATCT
CAAACGCCCTGCACATATACGCAACCAGCAGTTAACGCCATCTCACAGCC
CTCTCAAACAACGTACTTAAACGAAGAGCACTACAGTGAAACTTCCAGTG
ATTACACTTGTTCCTCTTACGAACCGCCCTCGAACGCCCTTGACCCTGGA
CATGGACCTACCCGTTATACAAACACCCTTCCAGGTGCAGGGCAGGAATT
AAACTCCCTGGAACCATCGCAAGTTGGGCATTCGTATTATTGATCAAAAC
AGCATTTGGTTCCTTCGCTCGATCTTTATTGTTCGTTATGTTCCTTGCTA
AACACCACTTTGGCTTAATATTATTTTATTGGTTGATGCGATGAAATACT
TCTTATTTTCATGACCAAAAATTGTTCCCTTTGCTTTGGATTTGTGGATT
ATGCCTGGAACGTTCTGATATCGTCTTATAAAATTCAACAAAAAAGGTAT
TTATTTAAGTCTGGAGTAGGGTCTGGGGGAAATGGATCGAGTCGCGAGTC
CTTTGGTTTTTATTTTTCGCCTCGTATTATTTCACTTTCCCCAGATTCCT
TAAAAGTATTTTGCATTTGTTATTATTTATCAATTTTTTGATATTATTTA
TCAATTTTTTGATATTATTTATTGAGTTCATTCATTGTCATGGATTCAAG
CATCATTCATTCATTCATTTTTTATACTCATTCGTTCATTGTTTTTGTTT
TGAACAAAAGCCCAGGCACTGGATTTTTTAACAACACATTTATTGGGTAT
TGATCTTAAAATATATACATGAATTTTATGGTGAAATTTTAGAAA Coding sequence (CDS) from alignment at sc0000521:183034..191678- >TCONS_00025150 ID=TCONS_00025150|Name=TCONS_00025150|organism=Clytia hemisphaerica|type=CDS|length=5499bp|location=Sequence derived from alignment at sc0000521:183034..191678- (Clytia hemisphaerica)
TTTTTTCAGTGAAGCTAAACGAGAAAGCGATGGCTACAGCTCTCCATCCC
GCAGAAACAACAACTGATCAAAGACCTACAATCCCTCTCTCAAGCCAACT
TCTAACAAACGGCAGCAAACGTCCCTCGTTACCTCTCAAATATACTTTCA
TTGACACACAAAACAAACGTTCAACAGTTGATGATTTATCTCCCAAATAT
TCCACACCCGTAATGGCTTCAACACCGTCATCCAGCATGGAAACAACACC
AAACCCTAACACATTTTTATCTCCTAAAACTCAAACTTATTTCACACCTG
TGGCCACTTTACCTTCCACCAACAAAGTCACACCTTTGAAGAATGTGGAA
AATCTGGCACCATCATCTTCACTCAATAACAATCAGTATCAGAAAGCCAA
CAATGTACCATCAAATAAGATGCCACATTTATCACCTCCAAAATACATCT
CTCCAGAAGACTTGCAAAAAGCGTTACCATCAACCGCTCATTTTGTACTC
AAACAAAACCACTTTGACCAGTACCCTCCTCAACACAAAGATCGTGTGAT
ACCTTCTCCAACTTTTAACAACAATGCGCATGCGTCAACATATTTTCCTG
CCAAAGATAACCTTTACTCGACGCATCAAACACAACGCCAAAACATTAAC
GCCCATTATCGGGCGCCCTATCACCGCAGGAATGATGAGAGCAGTAACCA
TCAGCAACAGACCACATCACTTCTCTCCTCGCATAACCATCAAACTACGG
TTCCTTACGATTCAAATTATGATCGTCTTATGGTATGTCTACGTTTTATT
TTTTGCCATTTCTCTGAAAACCTAATATCTAACGTTTTATCAGACGTGCA
GTATGATATCACGACTGCGTTGGAATGTCTCTTAAAGTATGAAGGCATAC
GACAACATAACGTTCAATTACGTCATGCCATCACATCCACTCAACCACTA
TCACATTACCAACAACTAAACCATCAATATAGGCCAGCAAATGTTCAACA
GCAAACAGTTAACAATCAACACCCTCCTCCGCTATTACGTCAACCGCCCT
ATCCATTACGTCATAATACATCAAGTCCTCCACCCTCACTGACGCCCTAT
CAGAATTTTCAACGACAATCTCAAACGCCCTGCACATATACGCAACCAGC
AGTTAACGCCATCTCACAGCCCTCTCAAACAACGTACTTAAACGAAGAGC
ACTACAGTGAAACTTCCAGTGATTACACTTGTTCCTCTTACGAACCGCCC
TCGAACGCCCTTGACCCTGGACATGGACCTACCCGTTATACAAACACCCT
TCCAGGTGCAGGGCAGGAATTAAACTCCCTGGAACCATCGCAAGTTGGGC
ATTCGTATTATTGAATGCAGCTGCTCTTCCTAAATCAAATGGTCCTCTCG
TCAACGCACCTGCCAACCCACCAAGAAACAGCACGTCGACGATACAACCA
AAACCAATTATTGTCGAGGATTCGAAAATTTCTCCTAAATGTGCTCGCTG
TCGGAATCACGGCGAAGTAACATCAATAAAGGGTCACAAGAATAATTGTC
CTTGGCGTCTCTGCCGTTGCAAGAAATGTTTAGCTGTTTTAAACAGACAA
CGCGTAATGGCAAAACAAATCAAGACACGCAGAAGAGCAGCCAAGCTTAA
AGCTAAATTTCTGCTCAACCCAGATGGATGCAGAAGCGGATTTTGAAATT
GATACAAATCTGTTTGGTCGAAGCCTTCCATTTGATATGATACGAAAGAC
AACATCCCCTCCGTTACCGAGTAATCGAAACCAACCAAACGAACATCGAG
GAAAATTCCAAGCTGATTTTCAAAGGATGTCAATTTTTTCAGTGAAGCTA
AACGAGAAAGCGATGGCTACAGCTCTCCATCCCGCAGAAACAACAACTGA
TCAAAGACCTACAATCCCTCTCTCAAGCCAACTTCTAACAAACGGCAGCA
AACGTCCCTCGTTACCTCTCAAATATACTTTCATTGACACACAAAACAAA
CGTTCAACAGTTGATGATTTATCTCCCAAATATTCCACACCCGTAATGGC
TTCAACACCGTCATCCAGCATGGAAACAACACCAAACCCTAACACATTTT
TATCTCCTAAAACTCAAACTTATTTCACACCTGTGGCCACTTTACCTTCC
ACCAACAAAGTCACACCTTTGAAGAATGTGGAAAATCTGGCACCATCATC
TTCACTCAATAACAATCAGTATCAGAAAGCCAACAATGTACCATCAAATA
AGATGCCACATTTATCACCTCCAAAATACATCTCTCCAGAAGACTTGCAA
AAAGCGTTACCATCAACCGCTCATTTTGTACTCAAACAAAACCACTTTGA
CCAGTACCCTCCTCAACACAAAGATCGTGTGATACCTTCTCCAACTTTTA
ACAACAATGCGCATGCGTCAACATATTTTCCTGCCAAAGATAACCTTTAC
TCGACGCATCAAACACAACGCCAAAACATTAACGCCCATTATCGGGCGCC
CTATCACCGCAGGAATGATGAGAGCAGTAACCATCAGCAACAGACCACAT
CACTTCTCTCCTCGCATAACCATCAAACTACGGTTCCTTACGATTCAAAT
TATGATCGTCTTATGGTATGTCTACGTTTTATTTTTTGCCATTTCTCTGA
AAACCTAATATCTAACGTTTTATCAGACGTGCAGTATGATATCACGACTG
CGTTGGAATGTCTCTTAAAGTATGAAGGCATACGACAACATAACGTTCAA
TTACGTCATGCCATCACATCCACTCAACCACTATCACATTACCAACAACT
AAACCATCAATATAGGCCAGCAAATGTTCAACAGCAAACAGTTAACAATC
AACACCCTCCTCCGCTATTACGTCAACCGCCCTATCCATTACGTCATAAT
ACATCAAGTCCTCCACCCTCACTGACGCCCTATCAGAATTTTCAACGACA
ATCTCAAACGCCCTGCACATATACGCAACCAGCAGTTAACGCCATCTCAC
AGCCCTCTCAAACAACGTACTTAAACGAAGAGCACTACAGTGAAACTTCC
AGTGATTACACTTGTTCCTCTTACGAACCGCCCTCGAACGCCCTTGACCC
TGGACATGGACCTACCCGTTATACAAACACCCTTCCAGGTGCAGGGCAGG
AATTAAACTCCCTGGAACCATCGCAAGTTGGGCATTCGTATTATTGAATG
CAGCTGCTCTTCCTAAATCAAATGGTCCTCTCGTCAACGCACCTGCCAAC
CCACCAAGAAACAGCACGTCGACGATACAACCAAAACCAATTATTGTCGA
GGATTCGAAAATTTCTCCTAAATGTGCTCGCTGTCGGAATCACGGCGAAG
TAACATCAATAAAGGGTCACAAGAATAATTGTCCTTGGCGTCTCTGCCGT
TGCAAGAAATGTTTAGCTGTTTTAAACAGACAACGCGTAATGGCAAAACA
AATCAAGACACGCAGAAGAGCAGCCAAGCTTAAAGCTAAATTTCTGCTCA
ACCCAGATGGATGCAGAAGCGGATTTTGAAATTGATACAAATCTGTTTGG
TCGAAGCCTTCCATTTGATATGATACGAAAGACAACATCCCCTCCGTTAC
CGAGTAATCGAAACCAACCAAACGAACATCGAGGAAAATTCCAAGCTGAT
TTTCAAAGGATGTCAATTTTTTCAGTGAAGCTAAACGAGAAAGCGATGGC
TACAGCTCTCCATCCCGCAGAAACAACAACTGATCAAAGACCTACAATCC
CTCTCTCAAGCCAACTTCTAACAAACGGCAGCAAACGTCCCTCGTTACCT
CTCAAATATACTTTCATTGACACACAAAACAAACGTTCAACAGTTGATGA
TTTATCTCCCAAATATTCCACACCCGTAATGGCTTCAACACCGTCATCCA
GCATGGAAACAACACCAAACCCTAACACATTTTTATCTCCTAAAACTCAA
ACTTATTTCACACCTGTGGCCACTTTACCTTCCACCAACAAAGTCACACC
TTTGAAGAATGTGGAAAATCTGGCACCATCATCTTCACTCAATAACAATC
AGTATCAGAAAGCCAACAATGTACCATCAAATAAGATGCCACATTTATCA
CCTCCAAAATACATCTCTCCAGAAGACTTGCAAAAAGCGTTACCATCAAC
CGCTCATTTTGTACTCAAACAAAACCACTTTGACCAGTACCCTCCTCAAC
ACAAAGATCGTGTGATACCTTCTCCAACTTTTAACAACAATGCGCATGCG
TCAACATATTTTCCTGCCAAAGATAACCTTTACTCGACGCATCAAACACA
ACGCCAAAACATTAACGCCCATTATCGGGCGCCCTATCACCGCAGGAATG
ATGAGAGCAGTAACCATCAGCAACAGACCACATCACTTCTCTCCTCGCAT
AACCATCAAACTACGGTTCCTTACGATTCAAATTATGATCGTCTTATGGT
ATGTCTACGTTTTATTTTTTGCCATTTCTCTGAAAACCTAATATCTAACG
TTTTATCAGACGTGCAGTATGATATCACGACTGCGTTGGAATGTCTCTTA
AAGTATGAAGGCATACGACAACATAACGTTCAATTACGTCATGCCATCAC
ATCCACTCAACCACTATCACATTACCAACAACTAAACCATCAATATAGGC
CAGCAAATGTTCAACAGCAAACAGTTAACAATCAACACCCTCCTCCGCTA
TTACGTCAACCGCCCTATCCATTACGTCATAATACATCAAGTCCTCCACC
CTCACTGACGCCCTATCAGAATTTTCAACGACAATCTCAAACGCCCTGCA
CATATACGCAACCAGCAGTTAACGCCATCTCACAGCCCTCTCAAACAACG
TACTTAAACGAAGAGCACTACAGTGAAACTTCCAGTGATTACACTTGTTC
CTCTTACGAACCGCCCTCGAACGCCCTTGACCCTGGACATGGACCTACCC
GTTATACAAACACCCTTCCAGGTGCAGGGCAGGAATTAAACTCCCTGGAA
CCATCGCAAGTTGGGCATTCGTATTATTGAATGCAGCTGCTCTTCCTAAA
TCAAATGGTCCTCTCGTCAACGCACCTGCCAACCCACCAAGAAACAGCAC
GTCGACGATACAACCAAAACCAATTATTGTCGAGGATTCGAAAATTTCTC
CTAAATGTGCTCGCTGTCGGAATCACGGCGAAGTAACATCAATAAAGGGT
CACAAGAATAATTGTCCTTGGCGTCTCTGCCGTTGCAAGAAATGTTTAGC
TGTTTTAAACAGACAACGCGTAATGGCAAAACAAATCAAGACACGCAGAA
GAGCAGCCAAGCTTAAAGCTAAATTTCTGCTCAACCCAGATGGATGCAGA
AGCGGATTTTGAAATTGATACAAATCTGTTTGGTCGAAGCCTTCCATTTG
ATATGATACGAAAGACAACATCCCCTCCGTTACCGAGTAATCGAAACCAA
CCAAACGAACATCGAGGAAAATTCCAAGCTGATTTTCAAAGGATGTCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00025150-exon-sc0000521-1575043694:191260..191678 | TCONS_00025150-exon-sc0000521-1575043694:191260..191678 | Clytia hemisphaerica | exon |
| TCONS_00025150-exon-sc0000521-1575043694:190604..190912 | TCONS_00025150-exon-sc0000521-1575043694:190604..190912 | Clytia hemisphaerica | exon |
| TCONS_00025150-exon-sc0000521-1575043694:183034..184949 | TCONS_00025150-exon-sc0000521-1575043694:183034..184949 | Clytia hemisphaerica | exon |
| TCONS_00025150-exon-sc0000521-1510915933:191260..191678 | TCONS_00025150-exon-sc0000521-1510915933:191260..191678 | Clytia hemisphaerica | exon |
| TCONS_00025150-exon-sc0000521-1510915933:190604..190912 | TCONS_00025150-exon-sc0000521-1510915933:190604..190912 | Clytia hemisphaerica | exon |
| TCONS_00025150-exon-sc0000521-1510915933:183034..184949 | TCONS_00025150-exon-sc0000521-1510915933:183034..184949 | Clytia hemisphaerica | exon |
| TCONS_00025150-exon-sc0000521-1491911889:191260..191678 | TCONS_00025150-exon-sc0000521-1491911889:191260..191678 | Clytia hemisphaerica | exon |
| TCONS_00025150-exon-sc0000521-1491911889:190604..190912 | TCONS_00025150-exon-sc0000521-1491911889:190604..190912 | Clytia hemisphaerica | exon |
| TCONS_00025150-exon-sc0000521-1491911889:183034..184949 | TCONS_00025150-exon-sc0000521-1491911889:183034..184949 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000521 | supercontig | sc0000521:183034..191678 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001275 | DM_DNA-bd |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0043565 | sequence-specific DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006355 |
regulation of transcription, DNA-templated |
| molecular_function |
GO:0043565 |
sequence-specific DNA binding |
Blast
The following BLAST results are available for this feature:
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