TCONS_00024896 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024896
Unique NameTCONS_00024896
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2309

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024896 ID=TCONS_00024896|Name=TCONS_00024896|organism=Clytia hemisphaerica|type=transcript|length=2309bp
GTTTGATGGTCTGATTGTGAGGGTGGTGTGTGATGCACAGGATCAAAATA
AGAGAAATGCAAGAAacATTGAAAGAATTTTCCTTCACTCGATACAACAC
AACTTTCAAAGATGTCGTTTGGTAATGGCACAACCACATTTTTCACTCCA
ACCACCATCTTGTCACCAATGACAACCTTGAACACCATTACTCCCAATGT
GGTCACCAAAACTTCCAATCAgcgTTTGCTCATCGGTGTGGTATTGGCCA
TTATTGGAAACCTCCTTATCAGTGTATCTATGAATGTACAGaaatattCG
CACACGATGTTGAAAGAAAGCAACAAATCTTACGTCAAAAGTCCTACTTG
GTGGTGCGGCATCATCTTGATGGTTATTGGAGAGGTGGGCAACTTCACAG
CTTATGCTTTCGCGCCTGCTTCTCTGGTGGCTCCACTTGGCACCACCACT
GTTATTGCGAATGCTGTCATTGCAGTGGTGTTTCTTAAAGAAACCGTCCG
CTATCAAGATTTCTTAGGCATTACGTTGGCCATAGTTGGAGCATTTCTGT
tgatcaatttttccaaaaagaatGAAACTATTTTGAACGCAGAAGAAATC
ATGGAATACGCCAAACATCTACCCTTCATACTTTATTTGgtTCTCGAAAT
CTCGGTGTTCATTTTGCTGGTGTATTTTCATCACAAGTTCAATGCTGGTC
GAGTTGTTACCGTTCTTTTACAAGTCGCTATATTAGGTTCGTTCACTGTG
ATCTCAGCGAAAGCAGTCTCTTCAATGTTGTCGTCATCATTTCAAGGAGA
CAACCAATTCAAATACCCCATCTTTTACTTGATGCTTCTCATCATGGTAG
TCACAGCTGTCGGTCAAGTCCGATTTCTGAATCAAGCGATGGCTTCTCAC
GACACGACGGTTGTGGTGCCGACCAACTTCGTCTTCTTTACCATGTCTGC
TATCCTTAGTGGTATTGTGTTTTATCGTGAATTTTATGGACTTAAatttc
tggaaattttcatGTTCTTATTCGGTGCGGTGTTGTCGTTCATTGGTGTT
TACTTCATCACGGGTGACCGAGAAAAAGATGAAGAAGGACCTGCTCCCGA
AGAAAGACAAGAACTTCTCAACGATTCTGCAGGACCATCGCAACGAAAGC
CTGCCATTTACACGACTTTGAACGACGCGAAACGAGTACAACCGGAAAAC
AGGTCCGACAATAATTTTCGCGCCGAAGAGAAAAAGGAGTAAAGTTGTTT
AGGATGTTAATGACGTAGAATATTTCAAAGCTAGAAGTCTGTAATGTAGG
TCAAATTATTTTAGACCCTTAACtttgaaattagaaatttttgttttgaa
ttcttctatttaacttttagatttctatttaatttttcctattttttagt
tggattttttttatattgggTGTGTAatagaattttatttaaattggATG
CAATTATCTAACATTTCGAGTTtggatttgtatttttttacagTGACCTA
GCAGTAATTTACTAGTAATGGATTTTAgagttagttttttttattgatta
aataatttttcatgacTTAAGAACGTGTAACTTACGTAACTTACCAAGTA
GTCAGCATACTCTAATAAAAGTTATGTAAcaaattccattttcaaaagag
tGTCGCTTTTCCAGGTCACTcgaattttgatttcttttgatgTTAATCTA
ATTTCAAGCACAGCAATAATATTTAATTTAGACACGCCGCTTTTAAACAT
TATGATAACAAGCTTTGTGACGACACTGACTGATGCTGACTTTGCACTTA
CGCCTTTGATATAAGAGAATGAGATTTGGCCAAATACCCAGAACAAATTA
GAAATAATCTTCAACAATTTTCGAGCTCCTTTTATGCccaaaagtataaa
aaaaggaaacgtttcaaaaccatgttaactatcgaaatttcgtccccggt
ggaaaaatacccttgaatttcagccccactgggagattgactttgatttc
atccccactcgaaatcccatgtttaaaaattgcactccaaaaccatccca
ctgggttttttaacctcGGAACAATATTATTTCTATCCCCtttaggattt
caataggaatttttgtGGGGTGTTTCTTAGGTTAATTTTCAGGGCCGAAA
TTTTCTTTCCTAAATATAATCACATACCCAGTTCCAACTTAAAATGAAGG
TTTGTTTTTTAACAGTTACTAACATAAAAGATCTTGCATTTCGTTTTAGA
TCTGGAATGATCTACTGGAAATATTATTTTGCTTTTTGTATTTAGTTAAT
AATTTAGAT
Run BLAST on NCBI

transcript from alignment at sc0000512:199198..206574-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024896 ID=TCONS_00024896|Name=TCONS_00024896|organism=Clytia hemisphaerica|type=transcript|length=7377bp|location=Sequence derived from alignment at sc0000512:199198..206574- (Clytia hemisphaerica)
GTTTGATGGTCTGATTGTGAGGGTGGTGTGTGATGCACAGGATCAAAATA AGAGAAATGCAAGAAGTATGAAAATCTTCCTTGTGACCTGTTTGTTTAGG CGCCGTTTCTTATTTATAGAGGAGTTTTTTCGTCAGCAGATGTATTTTTT GTTCAAAGGATTTTAATATATTCCTTAACACTTTTTCATTTTCTTCAATT TTTCCTGCACAGGAAAGAGAACGTTTTATCATCAATTATTTAGAAAACCT TCTGACATTTTGAAAGAAATAGGGAGTTTTTTAATACAATAAAACTCATT TGGGACTCATTTCCAACGAGCTTGAGTTGAAAAAGCTCTTTGTAGGAGAT GTGAAAATAATTTTTGCTCAAATTTCTAAACGTCAATATTTCGTGTTAAT ATCTTTTTACTTCGTCAGTGTTGTTTTTGAAAGTTGAAATAATTTATTTT GTTTTTGAACAATATCGTGATATAACGCTGACTATACCTTCAGAAGACTT TATTTTATGATTTATTTGCAAAATTCACGACATGTGTTTTTCTCTGAAAC TTTTCACTTTAAAATTTGTTTGAAAATATTTTATTTCAAACAGTCTTATT TTGTAATCAGAGATTTTGGTTTTCTTATTTTTAGACATTGAAAGAATTTT CCTTCACTCGATACAACACAACTTTCAAAGATGTCGTTTGGTAATGGCAC AACCACATTTTTCACTCCAACCACCATCTTGTCACCAATGACAACCTTGA ACACCATTACTCCCAATGTGGTCACCAAAACTTCCAATCAGGTATTTTGT TAATTTTTTCCATACATCAATAATTTGCTTCTCAACAATAATAATAAACA TTTTTCGTTAATTTCAAGATTTACAAACCTCTATTTCCTCTGCAATTTCA TCCTATCATTCTTATTTTATTAATCTTTTTTTTTTTAGCGTTTGCTCATC GGTGTGGTATTGGCCATTATTGGAAACCTCCTTATCAGTGTATCTATGAA TGTACAGGTAATGACCATTAAGTCTATTTGTAGGTCAGGGCCGGCGAATT GGTTTGAAAAGTGAGGGGGCTAAACGATTATAGTGACTAAGGAGGCCCCA CCATGGTTGGGGCGGACGGGCTGGAAAATTTTTGAAACTATGGTACTCTA CATTGGCTTAGAAGTGATCTAAATTTAAATTTTATGAAGTTATTGGAATG AAAAAATCAAAGAACTTAAAAAAGTAACTAAAACGACGCTCTCGAGTCGA CACAAACTCTCTACCAACTTCATCTAAATAAAGTTTATCCGTTAGATTTT TATGGATATGGAGCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNTTTTTTTTTGCAAAAAAGGGGGGGGGGGGCTATAGCCC CCCTAGCCCCCCCGGTTTCGCCGGCCCTGTAGGTTTGTTAAATCGGTAGA AATTTAAAAGCCAAGTGCACTCAGGCTACGTCATATCTTCCTTCGTTTCG AGCGTAAAACACCTACTCTTCGGGATATGAGCACTGCTCTTGTTTTGGAT ATTGAAATTCTTCGGATAAATCGCATGCGCACTGAGGTTTTAATGATACA ATAGAGAGTTTCGAAACCTAAGCCAATCAGCTGTGTTTTAAACATCCTTT TATTTGAAATCTCTATTGATAAACATCTTTTGTGAAAGCTGTTTATTTTG TTTAAACCTATTTGATAAGCAATTCCCGGTGGGGGCTACTAGTGGCCGCC TATAGCAGTGCCTATAGACCAAGAGTAAGGCCTAAAAGCCTGGAGCTGTC TATTGTGTAGACTAAGTGCACTTTACTATTTTCTTTTCTGTGTTATAAAC ACACGGCCTGTATAGATTTAACCTTTTTCTATTTTTCAGAAATATTCGCA CACGATGTTGAAAGAAAGCAACAAATCTTACGTCAAAAGTCCTACTTGGT GGTAAGTTCATTTTGTGGAGTGGAGATGGGAGAACCTTCAGTACTTTCCA TAGTTCGGACCCCTCCCCCTTTCTTAGGATAGTTTAAGAAGGAGGGATTA CATATATGTTGTAGATTATTTTCAAGCACTGTTATGAAATTTGGTCTTCA TGAAAGGAAGTTTTCTGAGTCAAAAAGAAGAAAGAAGTTTATTATTTCGC TTTCTCTCTCTACAGATAATTCACATATATTTGTTAGCTATTTTTGTCCA AGATCCTTGGGGATAGGCATTTTTAAAGGTTGAGTGGTGCCAAGAATGGG GGGGGGGGGCTTTTAAAAGGGGGGGGGGGGGCAAGAAGGGGGGGGGGGGG CAAGAAGGGGGGGGGGGGGCAAGAAGGGGGGGGGGGGGCAAGAAGGGGGG GGGGGGGCGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGTGGAGGGGGGGG GGGTCATTTAAGAAGGGGGGATCAGACCCCTTTCCGCACTATGTATTCAG AGAGATCTTTTGCCTCATTCTTCATTCTTCTGCAGATGTCATAATTTTCT GTACTTTTCAGGTGCGGCATCATCTTGATGGTTATTGGAGAGGTGGGCAA CTTCACAGCTTATGCTTTCGCGCCTGCTTCTCTGGTGGCTCCACTTGGCA CCACCACTGTTATTGGTAAGTCACGTGCTTTCTATATAAACATTTTTGTT AAGGCTTGAGGCTTTATTTTGGTCAAAACTGCACAAAGAAAGAAATTACT TTTAAAGGACTAATTACCTAATAGACTTTAAGGAGATCGTTTACTTTCCT CGCTGTCTAGTTGATAAATTTCTTTATTCGCTTGGTGTAGACATCAATTA TTATGTTCTATTTTAGCGAATGCTGTCATTGCAGTGGTGTTTCTTAAAGA AACCGTCCGCTATCAAGATTTCTTAGGTAAAATGCTCTCTTTTGATTAAA AGATCATCACCTTTCCCTCGCACAAGGAACGATATAGTTTGTTTGTTTGG TTTGTTGACCTTGCACATTTGACCAGTGTCTGACGGATGAAACTAATAGC AATGTACTATTTTTTAAGAAGATAATTTGAAAATTGATTTTATTTTTCAC AATCCTCCCTTTTCGAAGCAGGTTATAAATCAAATCCTTGCATGTCATCT TTTCAGGCATTACGTTGGCCATAGTTGGAGCATTTCTGTTGATCAATTTT TCCAAAAAGAATGAAACTATTTTGAACGCAGAAGAAATCATGGAATACGC CAAACATCTACCCTTCATACTTTATTTGGTAATCATCGTCACCAACTATT GACATATTGAAACATTCGTGCTCTGTTTTCCTTTAATCACTTTTTTCGTG AAATTTAGTCCTAGTGAAAAAAATCCAAATCATGATTTTGATCATTTTGA TCATTGATTTTGAGAAAAAAAAGCTAGAAAAATGAATTAATTTGGGTTAA AAAGAGGCTTATTCTGTTAATTAATTTTACCCACATTTTTAATCTAAATC TTAAAAGCGAAAAAAAGGTCCCCGTGAAATCAAAGGATGCATGCCCACAA ACTCAATTCAAACAATTTTTGTATGTTCATTATGCCTAAAAGTTTCATAG TATCGTGGGTATTTTTCATCTTTGATTTTTTCAAATTTAGGTTCTCGAAA TCTCGGTGTTCATTTTGCTGGTGTATTTTCATCACAAGTTCAATGCTGGT CGAGTTGTTACCGTTCTTTTACAAGTCGCTATATTAGGTACATTTTTCAT CCATCATAATAAGTATTCCCCACATCTCAAAGATTTCAAGTTCTTTAATT TCATTTTCATTTGAGACAAAATAATATTTCCATCGTCATTGATTTGCGAA ATCTGAATCGGTGTAAGGAGAAAAATTCTTCGTCCTATTATTGAATATTG AACTTTTGTTTAGGTTCGTTCACTGTGATCTCAGCGAAAGCAGTCTCTTC AATGTTGTCGTCATCATTTCAAGGAGACAACCAATTCAAATACCCCATCT TTTACTTGATGCTTCTCATCATGGTAGTCACAGCTGTCGGTCAAGTCCGG TGAGACTTTTGATAAGGATTTCATTATCATCATTTTTTTACGAAAAAAAA AAGTTTTTTGTCCCTGGAAAAGTTAAAATTAAAAATCTCCTTCTGTTTTC TCAATTAAAAGGAAGGTTTCACTTCAGGGGGACGCTCTACCTTAATGTAT AAAGAAAGCCTGGACTTTTGGCAAGATCAGTCTCTTTAATCTTTTTGAAA AGACAAAGCTCCTTTTTTCCAGATTTCTGAATCAAGCGATGGCTTCTCAC GACACGACGGTTGTGGTGCCGACCAACTTCGTCTTCTTTACCATGTCTGC TATCCTTAGTGGTGAGATTTTATCATTTGCTGCAGGGATATTGTTAATTT CGTTTCATTCTTGAATTTCTTTAATATCAACGGTATTTTCAGTTCATCCA AAATATAGCTGCTTTAAAGGTATTTTTGGACCTACCTCAGAGGTCCTTTA AATTAACCTGTGTCCATCCGTCCGTCTGATGCAAGCTTATCTCAGGATTT TTTGCACAATGATGTAAAATGGTAATGCTCAAAATGTGACGGAGCCCGAT TTTCGAAAAAAATATTTTCCTGCCTGAAATTTGCCAGAAAACCGGTTTTT TGGCATTTTCTCGAGATCTAATATAAGTTTTGTTTGATTTTTTTTGTATA AAGCTGCGTATTAGCAATGCCTAAAACTTCGGAAATATAACGTCGGAAAT ATGCCGGAAATAACCGTTTTTGCAGATTTTCATTAGATTTTTTCCCTATA TTTCGTTGTTTTTTTTCACACAAAAATATTATTAATAACAATACCCACCA TCAAGCATGTTTCAATTGTCAAAACACTGAAGCCGGAATTTTCTTAATAT CGCCGGAACAGCCCATTATCGCCGCAAAAACAGGTTTTCTTGAATTTTTC GAGCTGTACTTTATATTTTTACATGAAATTTTTGACACCGATGCAAAATG GGAATACCTAAAATGTGACGGAGCCCGATTTTCGAAAAAAAAATTTTCGG CCGAATATGCCGGAAAAAACCGTTTTTTAGGCATTTTTTCGAGATTTCAT AATTAGTTTTTTCTGAAATTTTTGCACAAAGTTGCGTATCAGCAATGTTC GAAACATGGCCGTTTCTTATTTTACTTCCTTTTCTATTTCAATTCAATAT TTATCATTAGGTAGGTCCAATATGCCCTGTGCTTGTTGTGTTTTATTCCG GTCCTATTTTTTGGAGTCTTCAATGTTAGGTTGAACGGTGAAATGAAATG CAGCTATTATTATTTAATTTTTGAGGCTTCAAAGTTGAAATCGCAAGTTT TTACTCATAATTTTATGCCTCCTCTTTTTATAGGTATTGTGTTTTATCGT GAATTTTATGGACTTAAATTTCTGGAAATTTTCATGTTCTTATTCGGGTG AGTACAGTGAAATTTTTTTTAAATGTCTTATACCGATCTCATCTATTCAT TTACGATTTTCTATCTTTACTCTATCCTTAGAGCGTCACCATTTTTCTAT CGTTTCTTGATCCACTTTTTACTGTGTTTTCAGTGCGGTGTTGTCGTTCA TTGGTGTTTACTTCATCACGGGTGACCGAGAAAAAGATGAAGAAGGACCT GCTCCCGAAGAAAGACAAGAACTTCTCAACGATTCTGCAGGTAACAATTA CTCCTGATTGATGCCAAATTGTGAATTTCTTAGTATGCACTACATTTACA TACTGTTTGACGAATACCGCTGACTTGCAGATATGATTTCTATCGCATTA AAAATTAACGACACTTTTAACGCAACTTTACTATGCCTCATAATTATAAA CTAATTAATGATTAATTTCAGAAAAAGAGTGATTTTCTTATGGAAAATTA GCCTCATTTTCTCCTAAAACTCAAACAAAAAGATTTAAATATTAATTCAT GTGTGAGCTCTGCACGAACATTGATCATTTCATGAAATGCACCAAAACAT TTTCAAATGTATGAAAGGGATGAGACGGACAAGAATCTTGCAAACGAAAC TAAAAAAACTCGTAGACATGATATGATGACTGCACTTCTTGACTTTACAG GACCATCGCAACGAAAGCCTGCCATTTACACGACTTTGAACGACGCGAAA CGAGTACAACCGGAAAACAGGTCCGACAATAATTTTCGCGCCGAAGAGAA AAAGGAGTAAAGTTGTTTAGGATGTTAATGACGTAGAATATTTCAAAGCT AGAAGTCTGTAATGTAGGTCAAATTATTTTAGACCCTTAACTTTGAAATT AGAAATTTTTGTTTTGAATTCTTCTATTTAACTTTTAGATTTCTATTTAA TTTTTCCTATTTTTTAGTTGGATTTTTTTTATATTGGGTGTGTAATAGAA TTTTATTTAAATTGGATGCAATTATCTAACATTTCGAGTTTGGATTTGTA TTTTTTTACAGTGACCTAGCAGTAATTTACTAGTAATGGATTTTAGAGTT AGTTTTTTTTATTGATTAAATAATTTTTCATGACTTAAGAACGTGTAACT TACGTAACTTACCAAGTAGTCAGCATACTCTAATAAAAGTTATGTAACAA ATTCCATTTTCAAAAGAGTGTCGCTTTTCCAGGTCACTCGAATTTTGATT TCTTTTGATGTTAATCTAATTTCAAGCACAGCAATAATATTTAATTTAGA CACGCCGCTTTTAAACATTATGATAACAAGCTTTGTGACGACACTGACTG ATGCTGACTTTGCACTTACGCCTTTGATATAAGAGAATGAGATTTGGCCA AATACCCAGAACAAATTAGAAATAATCTTCAACAATTTTCGAGCTCCTTT TATGCCCAAAAGTATAAAAAAAGGAAACGTTTCAAAACCATGTTAACTAT CGAAATTTCGTCCCCGGTGGAAAAATACCCTTGAATTTCAGCCCCACTGG GAGATTGACTTTGATTTCATCCCCACTCGAAATCCCATGTTTAAAAATTG CACTCCAAAACCATCCCACTGGGTTTTTTAACCTCGGAACAATATTATTT CTATCCCCTTTAGGATTTCAATAGGAATTTTTGTGGGGTGTTTCTTAGGT TAATTTTCAGGGCCGAAATTTTCTTTCCTAAATATAATCACATACCCAGT TCCAACTTAAAATGAAGGTTTGTTTTTTAACAGTTACTAACATAAAAGAT CTTGCATTTCGTTTTAGATCTGGAATGATCTACTGGAAATATTATTTTGC TTTTTGTATTTAGTTAATAATTTAGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013988XLOC_013988Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024896-exon-sc0000512-1575043694:206510..206574TCONS_00024896-exon-sc0000512-1575043694:206510..206574Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1575043694:205784..205940TCONS_00024896-exon-sc0000512-1575043694:205784..205940Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1575043694:205568..205636TCONS_00024896-exon-sc0000512-1575043694:205568..205636Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1575043694:204474..204535TCONS_00024896-exon-sc0000512-1575043694:204474..204535Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1575043694:203810..203913TCONS_00024896-exon-sc0000512-1575043694:203810..203913Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1575043694:203549..203608TCONS_00024896-exon-sc0000512-1575043694:203549..203608Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1575043694:203197..203318TCONS_00024896-exon-sc0000512-1575043694:203197..203318Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1575043694:202738..202834TCONS_00024896-exon-sc0000512-1575043694:202738..202834Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1575043694:202426..202561TCONS_00024896-exon-sc0000512-1575043694:202426..202561Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1575043694:202114..202202TCONS_00024896-exon-sc0000512-1575043694:202114..202202Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1575043694:201028..201091TCONS_00024896-exon-sc0000512-1575043694:201028..201091Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1575043694:200785..200891TCONS_00024896-exon-sc0000512-1575043694:200785..200891Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1575043694:199198..200374TCONS_00024896-exon-sc0000512-1575043694:199198..200374Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1510915933:206510..206574TCONS_00024896-exon-sc0000512-1510915933:206510..206574Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1510915933:205784..205940TCONS_00024896-exon-sc0000512-1510915933:205784..205940Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1510915933:205568..205636TCONS_00024896-exon-sc0000512-1510915933:205568..205636Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1510915933:204474..204535TCONS_00024896-exon-sc0000512-1510915933:204474..204535Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1510915933:203810..203913TCONS_00024896-exon-sc0000512-1510915933:203810..203913Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1510915933:203549..203608TCONS_00024896-exon-sc0000512-1510915933:203549..203608Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1510915933:203197..203318TCONS_00024896-exon-sc0000512-1510915933:203197..203318Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1510915933:202738..202834TCONS_00024896-exon-sc0000512-1510915933:202738..202834Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1510915933:202426..202561TCONS_00024896-exon-sc0000512-1510915933:202426..202561Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1510915933:202114..202202TCONS_00024896-exon-sc0000512-1510915933:202114..202202Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1510915933:201028..201091TCONS_00024896-exon-sc0000512-1510915933:201028..201091Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1510915933:200785..200891TCONS_00024896-exon-sc0000512-1510915933:200785..200891Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1510915933:199198..200374TCONS_00024896-exon-sc0000512-1510915933:199198..200374Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1491911889:206510..206574TCONS_00024896-exon-sc0000512-1491911889:206510..206574Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1491911889:205784..205940TCONS_00024896-exon-sc0000512-1491911889:205784..205940Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1491911889:205568..205636TCONS_00024896-exon-sc0000512-1491911889:205568..205636Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1491911889:204474..204535TCONS_00024896-exon-sc0000512-1491911889:204474..204535Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1491911889:203810..203913TCONS_00024896-exon-sc0000512-1491911889:203810..203913Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1491911889:203549..203608TCONS_00024896-exon-sc0000512-1491911889:203549..203608Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1491911889:203197..203318TCONS_00024896-exon-sc0000512-1491911889:203197..203318Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1491911889:202738..202834TCONS_00024896-exon-sc0000512-1491911889:202738..202834Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1491911889:202426..202561TCONS_00024896-exon-sc0000512-1491911889:202426..202561Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1491911889:202114..202202TCONS_00024896-exon-sc0000512-1491911889:202114..202202Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1491911889:201028..201091TCONS_00024896-exon-sc0000512-1491911889:201028..201091Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1491911889:200785..200891TCONS_00024896-exon-sc0000512-1491911889:200785..200891Clytia hemisphaericaexon
TCONS_00024896-exon-sc0000512-1491911889:199198..200374TCONS_00024896-exon-sc0000512-1491911889:199198..200374Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000512supercontigsc0000512:199198..206574 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.128669 9.77586e-07 3.16662e-06 0 0.000417337 2.61586e-09 0.00115735 0.000720691 3.21942 7.01005 0 1.94257 1.52927 4.64725 0.908405 1.93685 2.02324e-06 3.00567 5.26772 2.17747 5.47381e-09 0.414658 2.80179 7.56633e-07 0 0 1.4219e-05 0 0.341464 0.106103
Blast
BLAST of TCONS_00024896 vs. Swiss-Prot (Human)
Match: NPAL2 (NIPA-like protein 2 OS=Homo sapiens GN=NIPAL2 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 2.504e-64
Identity = 143/291 (49.14%), Postives = 202/291 (69.42%), Query Frame = 1
Query:  217 NQRLLIGVVLAIIGNLLISVSMNVQKYSHTML--KESNKSYVKSPTWWCGIILMVIGEVGNFTAYAFAPASLVAPLGXXXXXXXXXXXXXFLKETVRYQDFLGITLAIVGAFLLINFSKKNETILNAEEIMEYAKHLPFILYLVLEISVFILLVYFHHKFNAGRVVTVLLQVAILGSFTVIXXXXXXXXXXXXFQGDNQFKYPIFYLMLLIMVVTAVGQVRFLNQAMASHDXXXXXXXXXXXXXMSAILSGIVFYREFYGLKFLEIFMFLFGAVLSFIGVYFITGDREKDE 1083
            NQ  L GV+LAI+GNL+IS+S+N+QKYSH  L  +E  + Y KS  WW G++LM +GE GNF AY FAP +L+APLG  +V  +A+I+V FLK+ +R  D LG TLA  G +LL+NF+      ++A  +  Y     F++Y++LEI +F +L+YF+ +     +V +L  VAIL S TVIS KAVS M++ S     Q  YPIFY+M +IM+ + V QV+FLNQA   ++TT VVP N +FFT+SAI++GI+FY+EF G  FL +F++LFG  LSF+GV+ +T +REK+ 
Sbjct:   44 NQIHLFGVLLAILGNLVISISLNIQKYSHLQLAQQEHPRPYFKSVLWWGGVLLMAVGETGNFAAYGFAPITLIAPLGCVSVTGSAIISVTFLKDNLRASDLLGTTLAFAGTYLLVNFAPNITQAISARTVQYYLVGWQFLIYVILEILIFCILLYFYKRKGMKHMVILLTLVAILASLTVISVKAVSGMITFSVMDKMQLTYPIFYIMFIIMIASCVFQVKFLNQATKLYNTTTVVPVNHIFFTISAIIAGIIFYQEFLGAPFLTVFIYLFGCFLSFLGVFLVTRNREKEH 334          
The following BLAST results are available for this feature:
BLAST of TCONS_00024896 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NPAL22.504e-6449.14NIPA-like protein 2 OS=Homo sapiens GN=NIPAL2 PE=2... [more]
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