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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024837 ID=TCONS_00024837|Name=TCONS_00024837|organism=Clytia hemisphaerica|type=transcript|length=925bp
tttctggcttgtattgctctgaatgaattttttgtgttgcagacataatt
tttatgggtagtagGAAGGTTGATTGTGACCACCTATGACATAGTTTTCC
ATGGCACTGTCTAGAACTTCTTGGCATTTTGATTTAAGATGGGCAATATC
GGTTgataatgttgttgtttttttttcaacttttagatgaaaaaaatagt
gtaatcttagaaaaacttcCTCTATGGTAATGGAATTGAGATTCAgctAG
TTATCGTCATTTTCTCTATGAAATAATGTTTATAGATTTATAACAACACT
TCCCATAAAAAACCAGCCCACGGAAAGTTAAGTATTGGCCATCCAAGCAC
TGATGCAATGAAGCAAAGATTGACTCAGAATGACTCtacatttttgcatt
ttgaccTTCACGTTAAGGCATACGGGAAAAGTATGCTAAAAGAGGAAATC
AAACCTGCAGAAACTATATTAAGTGCATTATTTAGCTTGACCAAAACAGA
ATAGAATGGAGTAATAAATATATGCAGTGGATGTtgatattttgtaaatg
ttttctgGACAACNCCCTGGAAATATGGTCCAAACAAGTCATCAGAGCCA
GGAAACACGTGGGCCAAAattaccaaatgtaaacaaactagcAGACTAGA
AGACCTCAAAAGTGCTTCTATTTAAATTCTACAATTCTACTTGGATACAT
ATTTTCACTTGTTATATAACAAGTTTTTCTGAGCACAATGATTATTTTGc
caatattttttccatatgtaaatgtatttaatttttaaacgATGAGTTAC
ACATGTATTGGATTTAGTCCTCTATGGAGCATTAATATAATTTTCTAGTC
CAGCTTTCAAGTTATACAATCTGAATCAGTACTAATTAAAAATCAGTTGT
AAGGTTTTGGTCTTTTTTTATAgtc Run BLAST on NCBI transcript from alignment at sc0000511:226835..228218- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024837 ID=TCONS_00024837|Name=TCONS_00024837|organism=Clytia hemisphaerica|type=transcript|length=1384bp|location=Sequence derived from alignment at sc0000511:226835..228218- (Clytia hemisphaerica)
TTTCTGGCTTGTATTGCTCTGAATGAATTTTTTGTGTTGCAGACATAATT
TTTATGGGTAGTAGGAAGGTTGATTGTGACCACCTATGACATAGTTTTCC
ATGGCACTGTCTAGAACTTCTTGGCATTTTGATTTAAGATGGGCAATATC
GGTTGATAATGTTGTTGTTTTTTTTTCAACTTTTAGATGAAAAAAATAGT
GTAATCTTAGAAAAACTTCCTCTATGGTAATGGAATTGAGATTCAGTAAG
TATACTTGATTTCCTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNAACAAAAACATTGCAAAGTTCAAATAACTTCAACATG
TGATATTTATAAAGTCTAACTATTGATGGGCCATGATTTTGACCGGTCAG
TGGATTGACTCACAAGGCTTTGACAAATTTTCAGCCAAAACATAATTTCA
TCGGTGGACTTTACCAGTTTACAGTCTGTGTTAGGGTAATTCATACAGAT
TGCTTACAAAAAAGCCCTAGTTTTACAGTAGATTTTCATTTTATATATTT
TCAGGCTAGTTATCGTCATTTTCTCTATGAAATAATGTTTATAGATTTAT
AACAACACTTCCCATAAAAAACCAGCCCACGGAAAGTTAAGTATTGGCCA
TCCAAGCACTGATGCAATGAAGCAAAGATTGACTCAGAATGACTCTACAT
TTTTGCATTTTGACCTTCACGTTAAGGCATACGGGAAAAGTATGCTAAAA
GAGGAAATCAAACCTGCAGAAACTATATTAAGTGCATTATTTAGCTTGAC
CAAAACAGAATAGAATGGAGTAATAAATATATGCAGTGGATGTTGATATT
TTGTAAATGTTTTCTGGACAACNCCCTGGAAATATGGTCCAAACAAGTCA
TCAGAGCCAGGAAACACGTGGGCCAAAATTACCAAATGTAAACAAACTAG
CAGACTAGAAGACCTCAAAAGTGCTTCTATTTAAATTCTACAATTCTACT
TGGATACATATTTTCACTTGTTATATAACAAGTTTTTCTGAGCACAATGA
TTATTTTGCCAATATTTTTTCCATATGTAAATGTATTTAATTTTTAAACG
ATGAGTTACACATGTATTGGATTTAGTCCTCTATGGAGCATTAATATAAT
TTTCTAGTCCAGCTTTCAAGTTATACAATCTGAATCAGTACTAATTAAAA
ATCAGTTGTAAGGTTTTGGTCTTTTTTTATAGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024837-exon-sc0000511-1575043694:227974..228218 | TCONS_00024837-exon-sc0000511-1575043694:227974..228218 | Clytia hemisphaerica | exon |
| TCONS_00024837-exon-sc0000511-1575043694:226835..227514 | TCONS_00024837-exon-sc0000511-1575043694:226835..227514 | Clytia hemisphaerica | exon |
| TCONS_00024837-exon-sc0000511-1510915933:227974..228218 | TCONS_00024837-exon-sc0000511-1510915933:227974..228218 | Clytia hemisphaerica | exon |
| TCONS_00024837-exon-sc0000511-1510915933:226835..227514 | TCONS_00024837-exon-sc0000511-1510915933:226835..227514 | Clytia hemisphaerica | exon |
| TCONS_00024837-exon-sc0000511-1491911889:227974..228218 | TCONS_00024837-exon-sc0000511-1491911889:227974..228218 | Clytia hemisphaerica | exon |
| TCONS_00024837-exon-sc0000511-1491911889:226835..227514 | TCONS_00024837-exon-sc0000511-1491911889:226835..227514 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000511 | supercontig | sc0000511:226835..228218 - |
Blast
The following BLAST results are available for this feature:
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