TCONS_00024722 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024722
Unique NameTCONS_00024722
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2359

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024722 ID=TCONS_00024722|Name=TCONS_00024722|organism=Clytia hemisphaerica|type=transcript|length=2359bp
AAGAAGAAGAGTGCACTCATCTCACGTTACCACGTACCACCCACACGTAC
GTCGTATTTTTTCGGATATGAACTATTAATCCACATTTTTGCGGCTCTTG
TATCCTGTATTCCGATCGGGAAATTCGGGGAAATCTTCGGGCtcaaatga
aaacaaagttgGATAGATAGGTAGGCAGACAGACAAGCAACAACGGACAG
GCAGGACTGCAGGCAGCAAGAGAAGAAACTTTGAAGAGATTTTCTTCATT
TACCAAATCAAAGCCAGCAACAACTCAATACGAAAATGGAACTGCCTGAT
AGACTCTACAGCAAAGCTGAGTTCATTGAAACGGCTTCTGGAAACAAAGT
GAGCCGGCAATCTGTTCTTTGTGGAAGCCAAAACATTGTCCTCAATGGAA
AGACCATCATCATGTCAGAGTGTATCGTACGTGGTGACCTGGCGAATGTT
CGCATCGGACGCTTTTGTGTTTTGAGCAGCAGGAGTGTCATTCGACCGCC
TTTCAAACGATTCAGCAAAGGTGGAGCGTTCTTTCCCTTACACATTGGTG
ATCACGTTTTCGTTAAAGAAGACTCCATCATCAACGCCGCTCAAATTGGA
TCACATGTCTACATTGGAAAGAATTGCGTCATCGGTCGGCGTTCAGTGTT
GAAAGACTGTTGTGTTATAGCTGACAACACTGTCATTCCGCCCGAAACTG
TTGTCCCGCCCTTCACTATAATGGCGGGCTCTCCCGCGCGAGTTGTGGGC
GAACTACCTGAATGTACTCAAGACAACATGGTAGAGATGACCAAAAGCTT
TTTCAACCATTTCAAGGTGGACCCCGCCACTGTCAAAGCTAACACGCCCA
CGCGGAGGTGAATCGTGACGCCACTCGGAAGATTACACCCACTTTGACGT
TTAATGTGGAGTGTGCTCGAAGTTTTTGATGCGAGAGAGACAAAGACACG
GCTAGCTTTCAGGGAGATGTCATTTCATTACTTATtctcaatgaaaaaaa
aacaatctttaaaaaaaggttgaaGTTTTTTTGATAGCACTTGTACTGAA
AGCTGATTTTCATCTCTTTtgatcaaaaattttgagcaCCTCTTTATGAT
TCACTAGTGAGAGTACGAAATTCGGGCGACATTTCAGATGAATTTTGCTG
GATAAGGTGATGTTTTCGACCACAGAGAGGCTAGCACACTCCAAAGAGAG
GCTAGCACACTCCAAAGAGAGGTTTAGCACACTCCAAAGAGGGGCTTAGC
ACACTCCAAAGAGCTCGAGCTTATCATTATAAACTGACTCTCCATTGAAG
ATGTGGATACTGTGATTAATTTGGTGGAATGTGTCATTAGTTAGATACAT
TACCGTTGAAAATAAATGCAAACTTTATGCGTTTGAAATATTCATCACTT
ATTTATGGTGATCCTCTTTGGACGCGTGAAAAGGAGGAGAAAAGAAAACT
TGATTATTTCGTTGCCAGAATATTGTGTTACGAAAACAATGTAAATATGA
TGAAATATtaatattctgaaaaataaattcagaTTGCTTAGTTTATTAGG
CCCCGTTCTCAACAAATGCAGAAAGCTTTtgttcatgatatgcaccaata
ATAACATcgcatcacggacccaacagcagGTTgtttgcaagtgacgtatt
gactgattttacgtcacttgggaccaatcagctgtttggtCTATGGACTA
TAGTTTGATgtcgaagacattgcagtgatgtatatcatgaatttcccttt
ttctccCGCGCATACTCACAGGTTTTTTGATGATGATTCCATCCTCACAA
CAACACCAACTGAGTGATGATGCGCTCCTCTCCTTTCATAAGTCACGCGT
GTCTGCTAAAGTGGGCACCCCCCCCCTTGAAAAAGGAGTTGTTTGAGAAT
TCtactgaatttaaaagaagggggagGCTTGTgaacatttcaaataaaag
gggtGGCTTGGGCAAAAAGAGGGGGttaattttttgagagggaCAAAAGA
GTGTTGTccattcatttttaaatttctcaacaattattatatttccattt
atattattgtatttttcattttaaaaaccttGGAATATAGTAAGATTATA
AGAGTTTGTGcgtaaaatgtcgaaaaaagAGAGGAGCTGAACTTAAACCT
GGGAAAAAGGTCGAGgaattttcacttttaagaGGGGGTTGAGctaaaag
taagtaagtaagtaagtaagtaaatcaTTTATTTGTCAACGAAAGCGAGa
ctagcgaccacactcatagacataatgctaaactaaggaggtggccgcac
gATATAATTACAacaacaagtgaaaaaaaaatactaagttTATAAAACGA
TCATACTAG
Run BLAST on NCBI

protein sequence of TCONS_00024722-protein

>TCONS_00024722-protein ID=TCONS_00024722-protein|Name=TCONS_00024722-protein|organism=Clytia hemisphaerica|type=polypeptide|length=191bp
MELPDRLYSKAEFIETASGNKVSRQSVLCGSQNIVLNGKTIIMSECIVRG
DLANVRIGRFCVLSSRSVIRPPFKRFSKGGAFFPLHIGDHVFVKEDSIIN
AAQIGSHVYIGKNCVIGRRSVLKDCCVIADNTVIPPETVVPPFTIMAGSP
ARVVGELPECTQDNMVEMTKSFFNHFKVDPATVKANTPTRR
Run BLAST on NCBI

transcript from alignment at sc0000509:105253..121437+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024722 ID=TCONS_00024722|Name=TCONS_00024722|organism=Clytia hemisphaerica|type=transcript|length=16185bp|location=Sequence derived from alignment at sc0000509:105253..121437+ (Clytia hemisphaerica)
AAGAAGAAGAGTGCACTCATCTCACGTTACCACGTACCACCCACACGTAC
GTCGTATTTTTTCGGATATGAACTATTAATCCACATTTTTGCGGCTCTTG
TATCCTGTATTCCGATCGGGAAATTCGGGGAAATCTTCGGGCtcaaatga
aaacaaagttgGATAGATAGGTAGGCAGACAGACAAGCAACAACGGACAG
GCAGGACTGCAGGCAGCAAGAGAAGAAACTTTGAAGAGATTTTCTTCATT
TACCAAATCAAAGCCAGCAACAACTCAATACGAAAATGGAACTGCCTGAT
AGACTCTACAGCAAAGCTGAGTTCATTGAAACGGTATTATCTTTTANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcgattcc
cctaccccttagctttccaaaaatgtataacaagtgcttctaacaaaaca
gtcaagcgattccaaaaaatcgaacaaaattccccctactattttACTCT
TTTATATTCCAGGCTCTTCCCACCACACTCTCTTTTTTTATCCAGAgtac
ccactgacctttatataaccctggacaaagcttctcaatcccagccaagc
aaaagctttgatcggagttttttgaaaattggtaccctaatgtcggcact
actcgatagcggtgtaaatgcatcgagagagcTAGGTCTACTTTCTCTCA
AATTCTTTTGATGATGTAGCGGCGTTAGACGTTAATTtttagcattgcaa
tggcttctccttgggtaccaattctaaaaaaactccaatcaaagatggca
gatattgtttggtccagggttatataaaggtcagtgagaGTACCAGACGT
ACAGTCGCCAGTTTTCATAGTATGGCAGAAATCATCGAGATTTCAAGGGC
AGAGATTGCTCACTTTTCAAGGACagggacaaaattttgataatatctaC
AGTTCAGGggcaaaatcattgaaaactgGCCTGTTTTTCTGGCTTTTTTT
AGAGAGGTCCGGTTGCCTCGCGTGCCACAATTTGTGTTTCAACcagtatt
ccaacgaagccatattttggtgaccttttggtttgtacagaaatttcgcc
tgCTCAAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNt
ccctggataaaaattctggtcacgtgaccatccgtgattttagaccaatg
aaaacgctttatttccccggattaaagttgtgtctacactaacacgcggg
aagtagctagaaaaagagagaaaaaaccgggggtcaaattaaatttttct
cccttcttggggcaaacataaaagactttaacaGTTCCTaaaccagcatc
taataacatgaaaaccagaatatgattcttcaatgggaatcaaaactata
aagtgcacttacaaacatcaatttgtcagatccaacaaaattaataacca
cactgtcatcattgacaataaaacaaacgattttctgtcaagagccttgt
aaacattctaACGAcgtccatcgaaatgatctatcacagttcagtctacc
atttttagcgcggtccgaggattgagccgagaacgctccgcgaactcctg
cgcgggtggaaaacttcaatctgtcaatcattttctcaagcgaagtgtAC
GCGAAACGATTCTAGCTTTACtatagtgccgcgggtcatcaatggatagt
attcaattatcattatccctttattttcattccaagtacttttgcaaaaa
aaaggaaaaatagaaaagttgtattttttactgctctattcacatatata
ctgaatttgaaagatcttctatgtggcgtttttttgcaaacttcaaaaaa
ctgatttttgtcccgcctttgcgggactttggcttaagtgcttgagtgca
gcatagggtacaaagtccaaacatgcgttttccgtaatttttgtgtgaag
agttaggtctacactgttttaagaggccatttatttaagaaaggggtgtt
atatcataaataaattatgtaagtaagtgatattttaagtaacaagttca
tttaacaattttattttgaagtttgttttcaaaaacaaaacccccgtgct
agatgataatttcatcttcttaacttatggacccatttggaagtatttgt
aatacagatcatttggcagtgtagttgcagcctatacaagaattggaatc
taaaaaGTCTGAagtccttgccagtgaccccgcagagaaatttttagttg
gcagacactgactttaggttggtttggaaatcgttttattttgaaatgta
atcttcacttttcatgaatacttttatttatttggattcatgaaaggttc
aaggtttgtttactttttatttcaaattatttcattgatttattgagctg
caatagctgattgaaaaacgaagatttttgatagttatcagcgtgggctt
ggccgccattttgaatttcgattttttttctcctttacTCAGCAATTTAG
AGgtgttgttcgtaatacgcgatttggcttgcgaaagattgacactgcaa
caaCTTCTCcctcaaaacgctaattttcacactcttcccctgNAGATGGA
CACTGCAACAACTTCTCcctcaaaacgctaattttcacactcttcccctg
accactttcggtttcgttttcaaccacccacccACCCATCCAAACAGTCG
ATCACGTAACTCtggaacccccatctcaaaaatccataatggctccccca
cggctcatagagaattCTGCGTTTAGTATATCGAGTCAgccaaaaattct
ttcaaaaaacaaCTCGATCAATTTCTCCAAGATGTTCCCGACCAGCCACT
GCTCCCTTACTCTCCCTTACAGGATGGCTGACTCGAATTCAATTGTTGAC
ATGGTCAAACACTGGACCCCACGGGTTGAGTGAgcagagaatttgctgaa
acacatcaaaggtaatTAAAGGTAAGGTAGGTATTACAGAAATAGAACCC
TAATACTGTGAAATTGGGTAACTtgtatcagtggagggaaacttgcatag
ccatcaaatacCTGACCAACCAaaggagaaaaatttcaaaacaaatgtac
AATAACAGTGCAAGAACCATGCAGCTCTGCCAGTATagccttttttccct
tttttaaacttttttctttaatttccaTAGGTTTACGACAGAATTTctct
gaagtaaacaaaagaaaaacagggTTATGTTGCGTGAATACCTTTTTGCA
TTTCCACCCATCATCTATGCAAATACAATTCTTTTTTGGCTAATGCTAGG
AATATAGCacgaaaaaataagatcatgtttaaaatgaaaacatttattTG
ATGGAATGAATGAATTGAAATTAAAGGTTATAGATCATCACAGACTTGTT
ACATCATTAAAGAACTGTCGAGTTGGGGACAAGTCTTGAACAAAGTGGGG
ATGTATGTGAGGAAGCTAAATAACAGACCAAGTTTGATATTACTATTACT
ATATTATTTAGGTTATATTGATGTTATTTTTCTATGCTATTTATCTTGTA
CATCATGTATTATGCCTTTAGTGTTATACATTACATGTATATTATATTTG
TTGATAAAAAGAATAACCAGAGCAGAAgcttcatgtttttgatttataGC
TAGTTTACTATCATCCCTGGCAGTAGCGATCATTGTTTATACGAGGCTAG
TCTTGATCTCTACTGGCCCCCAGTGCACTTCATCTTAGAGTTCCTTGCTG
GGAGAATGGGTAGAGTGAGCCCTCCTCCTTTTCCAGAGTTCATTCTCTCC
AGCAAGAGAATTTGAGCCTTGAGGCCTGACCATCAACCAGGAAGCAGCAT
GTNAGAATTTGAGCCTTGAGGCCTGACCATCAACCTGGAAGCAGCATGTG
ATAAGAGATAAGTTCTTCACACTTTTCTCCTCTGATTGACTAGATATCTC
CCAGCTCTTAAGCAAGTTATTATTATCAGGCATAGTATAATTTGTAGTCA
ATATGTAAAATGGATTATATAAACATCACATGTAATCATTTCATTGTTAC
CCAATGACCTACTTTCTCACATTTTAGATCAATAATCTTTTCTTTGTTAA
CTTCAATGATTTAACCTATTTTGACTAAACTGTACTTTTCACTTGAGAAA
ATGGTTGCTTTTAAAAATATCTGAATGGTAGCACTTAGTTGTGACAGATA
ATTTTGATGGAAGTTAGACCACACTatagtaaaaataattctgtaCCTGT
AAATGAATAATGAACAGCAAGATTTCCAGGAAGAGCCCATTGGGTTGTGT
TTTCTCacctgtagatctttttcttgtgaagtttttcttcaaattagttt
tcaaggttggcatGGGCCAAATCTTCTCATCTATCCACAGCTCAAAAGTT
ACAAGAAttaaaagaaacaccataattCTAAACTCTAGTTGAGTATAGGA
AATATATGatttttagctcaaaatttaggtaatttctcaaagttttttaa
aatgttaatttcattgaaaagcactggttttattttctaaatccCTTTAA
AGTTTAGCGGCAAATTCTATTGCCTACGTGTCATACAAATTAGATAGTGC
TTCTGCAGCATTGATCTTTGGTATACATTTCAGTGGGATACTGGTGTGGC
TAACTGACGATGGCCTGTGCTCAAGAGCTGCACtttaagggtccgatttt
gaaagtcaatttttttggcagcacatgccgtcgtttaaaaattgatttct
CCCAGGTGTTTTCCTACCCCTTCCACAATAAGTCCCCCTGTTTCTTAGag
tctaaaaattttcacaaccCACCTCCCCCTCCTCTCTCTTCATCGTGATT
GTTGAAAGGAAATTAGTAgaacatttttaatttcttatttCAGGCTTCTG
GAAACAAAGTGAGCCGGCAATCTGTTCTTTGTGGAAGCCAAAACATTGTC
CTCAATGGAAAGGTATTACTTTTTCACATAATTAGTTTCTACAGAATTCC
AATCATGAATTTATTTAACATAGCAGCAGTCTACATATCGGTCCCAGGTA
AAAAATAGGCCTCCTAAGATTTAGGAAGTCTCCCTGACAAGTTAACTCCA
GTAATACTTTAAATAACCAACAAGACTTCTAACAATATGAAATATCCTGA
ATATGTGTTCTGGGAATTCACAAATGTTGAAAACATTTCCAATTATAaac
ttcttgtttttttaaacttctttatttaattataAACCTGCTCTTTGCAT
TCCCAAAGAACTGGTTTTGACCCAAAGTGGTACAGTACAGAGAGACGTGA
AAAAGATGACTCAAAACTGACTCAAAACTGACACAAAAAATGGGGTCTTA
AAACTACTTCTGGTCCTGGCCACGGCTTATTTTtctaaatgaagaaattt
tcgaATTCTGACTTGATCTTTCTTCAGACCATCATCATGTCAGAGTGTAT
CGTACGTGGTGACCTGGCGAATGTTCGCATCGGACGCTTTTGTGTTTTGA
GCAGCAGGAGTGTCATTCGACCGCCTTTCAAACGATTCAGCAAAGGGTAA
GGCTCTTTTTCAACCAGCAAAAAGATTACTTCATTTTACAGAACTACTTA
TTCTCTACTATTGCATTGAACTGACGTCCATTTTTCTTGACCTCTTTTGA
GGTCCTATGAATGAATCGTCCCTCTGCCAGCTTTGCTGTTTTCTTCTCGC
Catctaattcatgatattcatgacgtaatgtttttggcagtagtggcaaa
tttcatgcaacttttgtctagcttaaatttgccactactggctaaaacag
gggtatttccgtagaaatcattatgtcatgaatatcatgaatgatGTTCC
TCCCCGGGAAAATGTCGATGAAATAATTACTTCAAAAATGGTGCTTATAA
CAGAACTGCTACTTAAAGTCTCTTTAGTTTCATCTGGATAATGGTTCTTT
ACACATactcttgtgtgcttaattgtagagggggtcattttgcaattaaa
aaaaaaaatcgccCCCATATCACTTTATAATGTCCCCCCTCCTATTTTAT
GACCTTTACTGTATGCTACGAAGTGCCTAAATTggccaaaaaccttcatt
ttcctagggatttttaaCTAAATCAGGTCAATAGCACTTAATTATGTAAT
TATGTTTTTTATCtggagtaccccccccccccccccccatttaaaaaaaa
gaaaagatttaattttaatttttttttttttttgggtttccccccccccc
cccctacaattaagcacacgAGAGTATTCAAgtttaattgtttttgataG
TGAAAAGTTGAGCACACTTTTCTGCTActtaataattttcaaaagtgaCG
TCACTCACAATGTGATgtgttttaattaaaaaatttgaaatcaaaatatt
gtgcATGATAATATTCCAGGAAACTGAGCGGTCAAGTGAAGGATCGAATT
TAATTATTCTCAGCTCTGTTTTATCTCTTTATACcttattacttcgaata
aaagcctcccttcttttaaacgcccccctcgaataaacgcccctcctaaa
agaaaaatgatttaatgaacgccccctcaaataaacgccccctcaaacAA
ACGCCCCATTCGAATAATCGCCCCTTTAGGAGAGGGGCGTTTAaattaga
aacttgtgactttaatacTTTACTACCAGAGTTAACTGGgtttgaaaaga
aagattttactcatttcttgtaaccaaagaaattttgcactaaaatcctg
ataaagaactaGAAAGGGaatatttgctctaaatattcgactatagacca
aaataatttaataaacgcccccttcttttaaacgcccctcctgaaatcga
aaaaattagataaaagccccgggcgtttattcgaagtaatacgataGTAC
TTTTCAGTTGTTGACTTTCTCATGTGTAAATTGTAACTTTTCCTCACAAT
ACGTCTTTGACATTGGTTCCCTTATTCCCCTTTTTTCTATTATACAACTG
TTGCTTTGTAAGAAAAGCTTTCAGTTTAACCTTCTTAAGAACATAATCCC
CTTTCTTCTCGTGCTCATCAGAACGTGGGCAATTTTCTCATCCCTCAAGC
GGTGATACATTTCCCACACTTTTCCTCTCATCAatactagcgagtttatg
tatttgcacttttgaggacggtagagtaaCTGAAGCGATtaggaataacc
cgcagttctgacccgcaaaatcgaatacggtaaaagtgctgatttacctt
cgtcctcagctggtcaggatctagccaaattagaaccttaccctctccgt
cgctgaaaaacacacatacaaaAACTCGGTACTGTCACAGGGCCAAGGGA
AACTGTCTCTCTGATAACAATAAATTTGTATTTGGGATCGAATCTGGAAC
CCAACGTTGGCAGAAGGGGAGAGCCTTTTAGGCATTGTAGAATTCAGGGC
ACAAGCATAAACTGACATTAGATGTAATTAGCGACAAATCCGTGGTTGAC
TTCTTCAGTAATTAAAACTTAACAATTAGAGATTGAAAATGCATTCAAAT
ACAATGTTTTCGCCTTCGAAATCATTGAACAAACGATCGACTTAGAATGT
CGAGAGATGCCTGTAGCTTCCTCGATACGATTGTTAAGCTTTGCTTTACA
CGCTTTTcactaaaaaaacaaagaagtgTTTCAAATTCATTCACTAAGCA
TCATATCATTTATATTGCTGAATAAGATGGCTActatcatagatttataa
agcccgaagcccgtgcttttgctgaaaagtgtgccgaggttaggtaagaa
atcctaccaaattcacgtgacattacaatgaaatttcagcgcttgaccaa
tcagaaacttcgcggattttcgaaaacaatagcagcaatattttttgcga
tattcacttttttattgcttggaagagcttaaagcactccatctaaCCCT
TTggactttataaatctatggctaCTATAGCAATAGTTATAAAATGGTAG
ATCATAAATCCACCATGACAATACTTCATACAATTAGGGGGGGATTGCCC
TCTTAATAAGACTtgttcactgagacaggggtgtatgagGGTGTGAAGTT
AAATTTGGAACACTTAGAAGTCACTTTCGTTTTAGCCTAGGGCGAGAAca
taattaaatatttcccgttttccaaaagggaaatatttattaaaacgggc
tttctccataatttcccgtgtcaaaacgccttccgtacgccctgactgac
gNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTTTAGCTTCACCATGAc
cgtgggatgattttcaataaacttttgttgttatacacagtcactcttac
acatgatgactccagccatgattggtatcagacggtcagaatgttggaaa
taaaacattttacgagaaattgttgatagaaattatattgacttattttt
acaattttggtggtgtgggttttgttggttgattgttgtttgttggaata
caccgtttaacagtctcgccatctccactgtagaggcggtaggtaaaaat
aaatgctcactttagtgttcatacgcgtgcgcaACAGAcacctgttaaac
ggtgtattgattaccaaaaaaaagagaacctttttttgataaatacttta
tttttttcatgaaccgtgtggatggttgacatctttNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaatat
atatgtatactttattatgtgtgcttttttatatatgtcaataatgacct
tcatttttaaggaaatatttagtcgcaattttgcgattcttgtttacACC
CTTATACACCTTAGGGTGATAGAATAGGGTCCACCCCCAGAAATTTGAGG
TTACCAAAATGATTGGGGGTACCTAGATTttttgggggtacctgaacCCT
GGAGGACCCTATGGGTGAGAGTTCGTTTGTTAAAGGGGATAAATAGAAGG
ACGTCATGTCATATCTCACGTTTTTATTGAGTGCgggatttcaaatttca
attaacTACTTACAGCTTTAAAATCTAGCAAGGATTCTCAAAATGACAGt
cataaaaaattgatttcagtgtAATTTTCAAGGGGAAGGAATTTCAGTGT
gttagacgactaattcagacatagtagaaataaagcaaaacgttatggag
ggaacaaattttagttaGTTTATACAAACCAAATCCCTTAActataatcg
tattatcatataacgcctatactactgtattacacgcattttaaacgact
ccagtctagattGGACGATATTTTGACGATATTTTGACGTGATTTTGCAG
TCATGATTTCCTTTCCATCTTTCAGTGGAGCGTTCTTTCCCTTACACATT
GGTGATCACGTTTTCGTTAAAGAAGACTCCATCATCAACGCCGCTCAAAT
TGGATCACATGTCTACATTGGAAAGAATTGCGTCATCGTAAGACTTTTCT
TTGTCTGCTCCTCCATATCACATTTTCTCTCGTCTCTTCTCGATGGTACA
AGAATTTCAGTTAAGTTTCTTGAATTGTTTACAAGGTAACAAAATAGTGA
GGCTTTGTTTTGACTTCTGTACAGATCCTCAAGCGAAAAGAGTTTCTCAT
AGGAAATATAtctgtagaggtctgcgattcagactagagtTCGTTTTGTT
TTAAACTTCTTAATGTACGTACCTCCTCTCAAACAACTTtcttgttggac
ctaccccggtggggtggaggtcctataaattaacctgtgtccgttcgttc
gtctgttcgttcgttattagctttcctcgtgattggctcattagttgttt
ctgattttttgcacaaagatgtgtaactataaaccctcgaatgtgacgga
gcccgattttcgaaaaaaaaagtttttgggcaaatttgggcaaaaaaacg
gctaaaaaacgggttttttggactttgtgaaaaattaaatCATTAACTTT
CTCTGATTCTTTGCATGCAAgttaccatcataggtaaaagattgctcaag
cagactttttcaaaaaaattttgtttttcaaaaaacgcaggtttatctat
aagaatcactattaataagcataNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNttttttttgctcatgagggcttacttttgaagaatgtgtgtgtt
tagacatgaaattttggtttcttggcgtgtttttatagaaaaactggtca
aattcGATAATTATtcataagcacattatcaattacttaggtattagctt
ttctcgagattggctctttgattttttatgattttttgtataaagatgca
taactataaaccctcgaatgtgacggagcccgactttcgaaaaaaatatt
tttgggccaatttgggccaaaaaacggctaaaaacgggttttttggactt
tgtgaaaaattgatatttttaactttttctgactttttgcatgaaagtag
ggtaaaagatggctaagcagattttttcaaaaaaaatttgttggctcaaa
aaacgcatgtttatctataagaatcactattaataagcatacatcaatgt
tcttagccaaattactcaaatttttgatgagatagatgttttttttgctc
acaaagtcttgaatatgaaagaatatcgtttttttaataagaaacaaatg
actaattttaatagatcgtcactatttgtgttctgaatgaatttttaatg
gtcacgctcacgtagatatcaattatatatgtgttaaatgcataaccagg
taggtccataaaagtatcacttgtatttttcttcaatcatcctttgtttt
tttttagggTCGTCGTTCAGTGTTGAAAGACTGTTGTGTTATAGCTGACA
ACACTGTCATTCCGCCCGAAACTGNAGGGTCGGCGTTCAGTGTTGAAAGA
CTGTTGTGTTATAGCTGACAACACTGTCATTCCGCCCGAAACTGTTGTCC
CGCCCTTCACTATAATGGCGGGCTCTCCCGGTAAGTTACCAAGCCCTGCA
AACTCTGAATACTGAATACTGTCAACTTTTTCCgaagtttgtaaaaaaaa
taagaatcaactcaCCATAAGAAAGCCTGTCCATCTTTATCTTTTCTCAA
GCGGAGATTGAAACGTATATTTAAAGGCAAAATATTTGGTCAGCATTTTT
CAAGGAAGGAACAAACAACGCTGAGCTCTTTAGAAATTCCTTACTTTGTT
CGACCATTCGGCAAGTCTACTGGAGGCACTGTGAAAGTACAGTGGTcgtt
gaccttggttgctgcacaggctgCATTTAGAGGATTTTCACCCCTGtgtt
cttataagcattttccttataaaagaaaagcgtgtatgtAGGAATCGGAA
ACACTTGCTCTCTATGTAAAGGTTGAATATTCCTTAATAGCCTTCGTCAA
CTCTTTTAGCTGTGTTTTGATCTGACTTGTCCTAGTGTAATTGTTTTTAC
TCTGCCAACGCGAATCCAGTCACAACGTTTTCTTATTTATGCTCGTTTTT
TCCTCACCGTAGCGCGAGTTGTGGGCGAACTACCTGAATGTACTCAAGAC
AACATGGTAGAGATGACCAAAAGCTTTTTCAACCATTTCAAGGTGGACCC
CGCCACTGTCAAAGCTAACACGCCCACGCGGAGGTGAATCGTGACGCCAC
TCGGAAGATTACACCCACTTTGACGTTTAATGTGGAGTGTGCTCGAAGTT
TTTGATGCGAGAGAGACAAAGACACGGCTAGCTTTCAGGGAGATGTCATT
TCATTACTTATtctcaatgaaaaaaaaacaatctttaaaaaaaggttgaa
GTTTTTTTGATAGCACTTGTACTGAAAGCTGATTTTCATCTCTTTtgatc
aaaaattttgagcaCCTCTTTATGATTCACTAGTGAGAGTACGAAATTCG
GGCGACATTTCAGATGAATTTTGCTGGATAAGGTGATGTTTTCGACCACA
GAGAGGCTAGCACACTCCAAAGAGAGGCTAGCACACTCCAAAGAGAGGTT
TAGCACACTCCAAAGAGGGGCTTAGCACACTCCAAAGAGCTCGAGCTTAT
CATTATAAACTGACTCTCCATTGAAGATGTGGATACTGTGATTAATTTGG
TGGAATGTGTCATTAGTTAGATACATTACCGTTGAAAATAAATGCAAACT
TTATGCGTTTGAAATATTCATCACTTATTTATGGTGATCCTCTTTGGACG
CGTGAAAAGGAGGAGAAAAGAAAACTTGATTATTTCGTTGCCAGAATATT
GTGTTACGAAAACAATGTAAATATGATGAAATATtaatattctgaaaaat
aaattcagaTTGCTTAGTTTATTAGGCCCCGTTCTCAACAAATGCAGAAA
GCTTTtgttcatgatatgcaccaataATAACATcgcatcacggacccaac
agcagGTTgtttgcaagtgacgtattgactgattttacgtcacttgggac
caatcagctgtttggtCTATGGACTATAGTTTGATgtcgaagacattgca
gtgatgtatatcatgaatttccctttttctccCGCGCATACTCACAGGTT
TTTTGATGATGATTCCATCCTCACAACAACACCAACTGAGTGATGATGCG
CTCCTCTCCTTTCATAAGTCACGCGTGTCTGCTAAAGTGGGCACCCCCCC
CCTTGAAAAAGGAGTTGTTTGAGAATTCtactgaatttaaaagaaggggg
agGCTTGTgaacatttcaaataaaaggggtGGCTTGGGCAAAAAGAGGGG
GttaattttttgagagggaCAAAAGAGTGTTGTccattcatttttaaatt
tctcaacaattattatatttccatttatattattgtatttttcattttaa
aaaccttGGAATATAGTAAGATTATAAGAGTTTGTGcgtaaaatgtcgaa
aaaagAGAGGAGCTGAACTTAAACCTGGGAAAAAGGTCGAGgaattttca
cttttaagaGGGGGTTGAGctaaaagtaagtaagtaagtaagtaagtaaa
tcaTTTATTTGTCAACGAAAGCGAGactagcgaccacactcatagacata
atgctaaactaaggaggtggccgcacgATATAATTACAacaacaagtgaa
aaaaaaatactaagttTATAAAACGATCATACTAG

Coding sequence (CDS) from alignment at sc0000509:105253..121437+

>TCONS_00024722 ID=TCONS_00024722|Name=TCONS_00024722|organism=Clytia hemisphaerica|type=CDS|length=3456bp|location=Sequence derived from alignment at sc0000509:105253..121437+ (Clytia hemisphaerica)
ATGGAACTGCCTGATAGACTCTACAGCAAAGCTGAGTTCATTGAAACGGC
TTCTGGAAACAAAGTGAGCCGGCAATCTGTTCTTTGTGGAAGCCAAAACA
TTGTCCTCAATGGAAAGACCATCATCATGTCAGAGTGTATCGTACGTGGT
GACCTGGCGAATGTTCGCATCGGACGCTTTTGTGTTTTGAGCAGCAGGAG
TGTCATTCGACCGCCTTTCAAACGATTCAGCAAAGGTGGAGCGTTCTTTC
CCTTACACATTGGTGATCACGTTTTCGTTAAAGAAGACTCCATCATCAAC
GCCGCTCAAATTGGATCACATGTCTACATTGGAAAGAATTGCGTCATCGG
TCGGCGTTCAGTGTTGAAAGACTGTTGTGTTATAGCTGACAACACTGTCA
TTCCGCCCGAAACTGTTGTCCCGCCCTTCACTATAATGGCGGGCTCTCCC
GCGCGAGTTGTGGGCGAACTACCTGAATGTACTCAAGACAACATGGTAGA
GATGACCAAAAGCTTTTTCAACCATTTCAAGGTGGACCCCGCCACTGTCA
AAGCTAACACGCCCACGCGGAGGTGAATGGAACTGCCTGATAGACTCTAC
AGCAAAGCTGAGTTCATTGAAACGGCTTCTGGAAACAAAGTGAGCCGGCA
ATCTGTTCTTTGTGGAAGCCAAAACATTGTCCTCAATGGAAAGACCATCA
TCATGTCAGAGTGTATCGTACGTGGTGACCTGGCGAATGTTCGCATCGGA
CGCTTTTGTGTTTTGAGCAGCAGGAGTGTCATTCGACCGCCTTTCAAACG
ATTCAGCAAAGGTGGAGCGTTCTTTCCCTTACACATTGGTGATCACGTTT
TCGTTAAAGAAGACTCCATCATCAACGCCGCTCAAATTGGATCACATGTC
TACATTGGAAAGAATTGCGTCATCGGTCGGCGTTCAGTGTTGAAAGACTG
TTGTGTTATAGCTGACAACACTGTCATTCCGCCCGAAACTGTTGTCCCGC
CCTTCACTATAATGGCGGGCTCTCCCGCGCGAGTTGTGGGCGAACTACCT
GAATGTACTCAAGACAACATGGTAGAGATGACCAAAAGCTTTTTCAACCA
TTTCAAGGTGGACCCCGCCACTGTCAAAGCTAACACGCCCACGCGGAGGT
GAATGGAACTGCCTGATAGACTCTACAGCAAAGCTGAGTTCATTGAAACG
GCTTCTGGAAACAAAGTGAGCCGGCAATCTGTTCTTTGTGGAAGCCAAAA
CATTGTCCTCAATGGAAAGACCATCATCATGTCAGAGTGTATCGTACGTG
GTGACCTGGCGAATGTTCGCATCGGACGCTTTTGTGTTTTGAGCAGCAGG
AGTGTCATTCGACCGCCTTTCAAACGATTCAGCAAAGGTGGAGCGTTCTT
TCCCTTACACATTGGTGATCACGTTTTCGTTAAAGAAGACTCCATCATCA
ACGCCGCTCAAATTGGATCACATGTCTACATTGGAAAGAATTGCGTCATC
GGTCGGCGTTCAGTGTTGAAAGACTGTTGTGTTATAGCTGACAACACTGT
CATTCCGCCCGAAACTGTTGTCCCGCCCTTCACTATAATGGCGGGCTCTC
CCGCGCGAGTTGTGGGCGAACTACCTGAATGTACTCAAGACAACATGGTA
GAGATGACCAAAAGCTTTTTCAACCATTTCAAGGTGGACCCCGCCACTGT
CAAAGCTAACACGCCCACGCGGAGGTGAATGGAACTGCCTGATAGACTCT
ACAGCAAAGCTGAGTTCATTGAAACGGCTTCTGGAAACAAAGTGAGCCGG
CAATCTGTTCTTTGTGGAAGCCAAAACATTGTCCTCAATGGAAAGACCAT
CATCATGTCAGAGTGTATCGTACGTGGTGACCTGGCGAATGTTCGCATCG
GACGCTTTTGTGTTTTGAGCAGCAGGAGTGTCATTCGACCGCCTTTCAAA
CGATTCAGCAAAGGTGGAGCGTTCTTTCCCTTACACATTGGTGATCACGT
TTTCGTTAAAGAAGACTCCATCATCAACGCCGCTCAAATTGGATCACATG
TCTACATTGGAAAGAATTGCGTCATCGGTCGGCGTTCAGTGTTGAAAGAC
TGTTGTGTTATAGCTGACAACACTGTCATTCCGCCCGAAACTGTTGTCCC
GCCCTTCACTATAATGGCGGGCTCTCCCGCGCGAGTTGTGGGCGAACTAC
CTGAATGTACTCAAGACAACATGGTAGAGATGACCAAAAGCTTTTTCAAC
CATTTCAAGGTGGACCCCGCCACTGTCAAAGCTAACACGCCCACGCGGAG
GTGAATGGAACTGCCTGATAGACTCTACAGCAAAGCTGAGTTCATTGAAA
CGGCTTCTGGAAACAAAGTGAGCCGGCAATCTGTTCTTTGTGGAAGCCAA
AACATTGTCCTCAATGGAAAGACCATCATCATGTCAGAGTGTATCGTACG
TGGTGACCTGGCGAATGTTCGCATCGGACGCTTTTGTGTTTTGAGCAGCA
GGAGTGTCATTCGACCGCCTTTCAAACGATTCAGCAAAGGTGGAGCGTTC
TTTCCCTTACACATTGGTGATCACGTTTTCGTTAAAGAAGACTCCATCAT
CAACGCCGCTCAAATTGGATCACATGTCTACATTGGAAAGAATTGCGTCA
TCGGTCGGCGTTCAGTGTTGAAAGACTGTTGTGTTATAGCTGACAACACT
GTCATTCCGCCCGAAACTGTTGTCCCGCCCTTCACTATAATGGCGGGCTC
TCCCGCGCGAGTTGTGGGCGAACTACCTGAATGTACTCAAGACAACATGG
TAGAGATGACCAAAAGCTTTTTCAACCATTTCAAGGTGGACCCCGCCACT
GTCAAAGCTAACACGCCCACGCGGAGGTGAATGGAACTGCCTGATAGACT
CTACAGCAAAGCTGAGTTCATTGAAACGGCTTCTGGAAACAAAGTGAGCC
GGCAATCTGTTCTTTGTGGAAGCCAAAACATTGTCCTCAATGGAAAGACC
ATCATCATGTCAGAGTGTATCGTACGTGGTGACCTGGCGAATGTTCGCAT
CGGACGCTTTTGTGTTTTGAGCAGCAGGAGTGTCATTCGACCGCCTTTCA
AACGATTCAGCAAAGGTGGAGCGTTCTTTCCCTTACACATTGGTGATCAC
GTTTTCGTTAAAGAAGACTCCATCATCAACGCCGCTCAAATTGGATCACA
TGTCTACATTGGAAAGAATTGCGTCATCGGTCGGCGTTCAGTGTTGAAAG
ACTGTTGTGTTATAGCTGACAACACTGTCATTCCGCCCGAAACTGTTGTC
CCGCCCTTCACTATAATGGCGGGCTCTCCCGCGCGAGTTGTGGGCGAACT
ACCTGAATGTACTCAAGACAACATGGTAGAGATGACCAAAAGCTTTTTCA
ACCATTTCAAGGTGGACCCCGCCACTGTCAAAGCTAACACGCCCACGCGG
AGGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013887XLOC_013887Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024722-proteinTCONS_00024722-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024722-exon-sc0000509-1491911889:105253..105585TCONS_00024722-exon-sc0000509-1491911889:105253..105585Clytia hemisphaericaexon
TCONS_00024722-exon-sc0000509-1510915933:105253..105585TCONS_00024722-exon-sc0000509-1510915933:105253..105585Clytia hemisphaericaexon
TCONS_00024722-exon-sc0000509-1575043694:105253..105585TCONS_00024722-exon-sc0000509-1575043694:105253..105585Clytia hemisphaericaexon
TCONS_00024722-exon-sc0000509-1491911889:110846..110914TCONS_00024722-exon-sc0000509-1491911889:110846..110914Clytia hemisphaericaexon
TCONS_00024722-exon-sc0000509-1510915933:110846..110914TCONS_00024722-exon-sc0000509-1510915933:110846..110914Clytia hemisphaericaexon
TCONS_00024722-exon-sc0000509-1575043694:110846..110914TCONS_00024722-exon-sc0000509-1575043694:110846..110914Clytia hemisphaericaexon
TCONS_00024722-exon-sc0000509-1491911889:111380..111498TCONS_00024722-exon-sc0000509-1491911889:111380..111498Clytia hemisphaericaexon
TCONS_00024722-exon-sc0000509-1510915933:111380..111498TCONS_00024722-exon-sc0000509-1510915933:111380..111498Clytia hemisphaericaexon
TCONS_00024722-exon-sc0000509-1575043694:111380..111498TCONS_00024722-exon-sc0000509-1575043694:111380..111498Clytia hemisphaericaexon
TCONS_00024722-exon-sc0000509-1491911889:117478..117589TCONS_00024722-exon-sc0000509-1491911889:117478..117589Clytia hemisphaericaexon
TCONS_00024722-exon-sc0000509-1510915933:117478..117589TCONS_00024722-exon-sc0000509-1510915933:117478..117589Clytia hemisphaericaexon
TCONS_00024722-exon-sc0000509-1575043694:117478..117589TCONS_00024722-exon-sc0000509-1575043694:117478..117589Clytia hemisphaericaexon
TCONS_00024722-exon-sc0000509-1491911889:119180..119282TCONS_00024722-exon-sc0000509-1491911889:119180..119282Clytia hemisphaericaexon
TCONS_00024722-exon-sc0000509-1510915933:119180..119282TCONS_00024722-exon-sc0000509-1510915933:119180..119282Clytia hemisphaericaexon
TCONS_00024722-exon-sc0000509-1575043694:119180..119282TCONS_00024722-exon-sc0000509-1575043694:119180..119282Clytia hemisphaericaexon
TCONS_00024722-exon-sc0000509-1491911889:119815..121437TCONS_00024722-exon-sc0000509-1491911889:119815..121437Clytia hemisphaericaexon
TCONS_00024722-exon-sc0000509-1510915933:119815..121437TCONS_00024722-exon-sc0000509-1510915933:119815..121437Clytia hemisphaericaexon
TCONS_00024722-exon-sc0000509-1575043694:119815..121437TCONS_00024722-exon-sc0000509-1575043694:119815..121437Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000509supercontigsc0000509:105253..121437 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.13457	13.1024	9.16702	11.9837	12.3019	10.3345	12.9917	12.2994	9.05772	10.2614	11.6515	7.48937	7.51069	7.19746	5.49573	4.65839	6.3889	7.93416	6.26934	4.7976	6.36148	8.80476	6.20776	9.44788	14.9327	13.8343	5.42352	3.42911	4.51218	5.86491
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001451Hexapep
IPR011004Trimer_LpxA-like
Blast
[Close]
BLAST of TCONS_00024722 vs. Swiss-Prot (Human)
Match: DCTN5 (Dynactin subunit 5 OS=Homo sapiens GN=DCTN5 PE=1 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 4.995e-91
Identity = 131/176 (74.43%), Postives = 158/176 (89.77%), Query Frame = 1 
Query:  286 MELPDRLYSKAEFIETASGNKVSRQSVLCGSQNIVLNGKTIIMSECIVRGDLANVRIGRFCVLSSRSVIRPPFKRFSKGGAFFPLHIGDHVFVKEDSIINAAQIGSHVYIGKNCVIGRRSVLKDCCVIADNTVIPPETVVPPFTIMAGSPARVVGELPECTQDNMVEMTKSFFNHF 813
            MEL + LY+K+E+IETASGNKVSRQSVLCGSQNIVLNGKTI+M++CI+RGDLANVR+GR CV+ SRSVIRPPFK+FSKG AFFPLHIGDHVF++ED ++NAAQIGS+V++GKNCVIGRR VLKDCC I DNTV+PPETVVPPFT+ +G P    GELPECTQ+ M+++TKS++  F
Sbjct:    1 MELGELLYNKSEYIETASGNKVSRQSVLCGSQNIVLNGKTIVMNDCIIRGDLANVRVGRHCVVKSRSVIRPPFKKFSKGVAFFPLHIGDHVFIEEDCVVNAAQIGSYVHVGKNCVIGRRCVLKDCCKILDNTVLPPETVVPPFTVFSGCPGLFSGELPECTQELMIDVTKSYYQKF 176
The following BLAST results are available for this feature:
BLAST of TCONS_00024722 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DCTN54.995e-9174.43Dynactin subunit 5 OS=Homo sapiens GN=DCTN5 PE=1 S... [more]
back to top