TCONS_00024643 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024643
Unique NameTCONS_00024643
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1907

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024643 ID=TCONS_00024643|Name=TCONS_00024643|organism=Clytia hemisphaerica|type=transcript|length=1907bp
GTCAGTTAGAAGAAGGTGAAGATGTCAGCGAAAACGGTGAAGATTGTTTT
CAAGACAGATGTTTTCATACTAAGGGATGTTTTGGTCCACTGAAATATTA
TTTCAACCCCATCACATCAATATGCTCCGCCCTTATTATTTGGGCGTTTG
TGGCGTGGTGTATTCAATCGCCTGATGGGTCACAAGAAGTAACGACCAGA
TGGAAGAGTTGGATTACCAAACACTGGACATGGTTGTACATTGGTACACA
AGATGTGTGGGCTGTCTTCATCATTTGTGTTTACTTCTCCAAATATTCTA
ACATGAAATTAGGGAAGGATGATGAAAAACCAGAATTTTCGAACGGAGCC
TACTTCACCATGTTatttgcagcaggagttggtatTGGATTGTTTTACTT
CGGTGTCGCTGAACCCATCTTTCACCTACAACCTGGACAGTATGGAAATC
GATTCTGGAACAGGTACACAGACAATCAGCAAGCACAAGATGCCATCAAC
GTGACCTTCTACCACTGGGGTATCCACGCATGGGTGGTCTACGTTTTGAT
CGGTTTATTGCTCTCCTTCTTATCCTATCGTCGCTCTCTACCCATGACAA
TGCGCATGGTCTTCTTCCCGCTGATTGGTGAAAGGGTTTATGGTATTCTT
GGCGATTTGGTAGATATTTTGTCCATTATTTGTACCATGTTCGGCGTGTG
CACTAGTTTAGGACTGGGTGTTGTCCAGCTGAACAATGGTTTAAGTCGTG
TCATTCCATCAATCGAGATATCGGAAACAAACCAAGTCATCTTGATCTGG
TGTATCACATCTATTGCAACTTTATCTGTGGTTAGTGGGCTGAAGTTTGG
CATACGGACGCTCTCTGAAACATGCTTTGGTGTTGGTTGCCTGCTACTTC
TAATTGTTTACTTGGCTGACGATACAGtgtttttgaccaatttgttcGTG
CAGTCATGCGGATATTATTTGCAATGGATTGTACAGATAGGTTTCCATAC
TGATGCTTTTGCCATGAGAAATGATGCACCAGATGGCAAGGAAAACCCTC
AGTGGATGGATTCGTGGACATTGTTCTATTGGGGTTGGTGGATTAGTTGG
GCACCATTCGTAGGGATGTTCATAGCGAAGATCAGTCGTGGTcgcaccat
caaagaattcatCTTGTACACGTCAACTCTTCCAGTGATCTATACGTTCT
TTTGGTTGAGTGTGTTCGGTGGTGCTGGCATCTCCATGGAACGAAAAGCT
CAGAATTTGAACATTACTTGTTCCATGTACAAttCAACTCGATATCCGAT
GTATGGAGCAGAGAATATTTGGAAGACTCATCACGTGCATCGTTTATCGT
GTCGCACCTCCTCTCAAATGTGGTTCGATGTGGTGGAACAGTATGAAGGT
ATTGGAAACCTTCTCTCCATTNATGTGGTTCGATGTGGTGGAACAGTATG
AAGGTATTGGAAACCTTCTTTCCATCATTTCAATCATCGGTTTGATCCTT
TACTTCATCACCAGTTCTGATAGTGGTTCATTGGTCATTGATTCCCTCTC
TGCTAATGGTTATCCTGATCCACCAATTGGGCAACGCATCTTTTGGGCGG
TCACTGAGGGTGCTACGGCTACCGCCCTTCTACGCCAAGGTGGTAAAGAT
GCTTTGAGGGCATTACAAGCGGTCTCTATAGCAGCTGGGTTACCATTTAc
cattattttgaattttgcttGCATCTCTTTATGGCGAGcgatgaaaatgg
aatatggaGATATCAAAGAAGAAGCGGATGGTTGGAAAAGCAGTTTGTTG
ACACCCATTGATTCCATAAAAGGTGTCAAGAAGATCATCCTCAATCTTTT
CTTCCCTTGGTACACACTCAGTAAAGCTGTTGTCAAGCTAGATTCGTTAA
GTTCGAG
Run BLAST on NCBI

protein sequence of TCONS_00024643-protein

>TCONS_00024643-protein ID=TCONS_00024643-protein|Name=TCONS_00024643-protein|organism=Clytia hemisphaerica|type=polypeptide|length=482bp
QLEEGEDVSENGEDCFQDRCFHTKGCFGPLKYYFNPITSICSALIIWAFV
AWCIQSPDGSQEVTTRWKSWITKHWTWLYIGTQDVWAVFIICVYFSKYSN
MKLGKDDEKPEFSNGAYFTMLFAAGVGIGLFYFGVAEPIFHLQPGQYGNR
FWNRYTDNQQAQDAINVTFYHWGIHAWVVYVLIGLLLSFLSYRRSLPMTM
RMVFFPLIGERVYGILGDLVDILSIICTMFGVCTSLGLGVVQLNNGLSRV
IPSIEISETNQVILIWCITSIATLSVVSGLKFGIRTLSETCFGVGCLLLL
IVYLADDTVFLTNLFVQSCGYYLQWIVQIGFHTDAFAMRNDAPDGKENPQ
WMDSWTLFYWGWWISWAPFVGMFIAKISRGRTIKEFILYTSTLPVIYTFF
WLSVFGGAGISMERKAQNLNITCSMYNSTRYPMYGAENIWKTHHVHRLSC
RTSSQMWFDVVEQYEGIGNLLSIXVVRCGGTV
Run BLAST on NCBI

transcript from alignment at sc0000506:25656..28915-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024643 ID=TCONS_00024643|Name=TCONS_00024643|organism=Clytia hemisphaerica|type=transcript|length=3260bp|location=Sequence derived from alignment at sc0000506:25656..28915- (Clytia hemisphaerica)
GTCAGTTAGAAGAAGGTGAAGATGTCAGCGAAAACGGTGAAGATTGTTTT
CAAGACAGGTGATCAAAAGTTTGTAGTTGTTTTCCTTTGCCTCTTGTATT
CTTTCAATTGTTATACACACCCCTGTCTCAGTTTTTTCCTCCAGGAAACA
TACTCACATTCAAAAACACCAACAAAAAACCATGACTTCTGTTTTTCAAT
AGTTGTACAAAGCTTTAAAAACAACAATTTTTTACCCAATACGTCACTTA
CAACCAATCAGCTGTTGTATTTTTAATGGAAGGAGACATTTTAGGGGTGT
ATATATCCTGAATGGAAATAACTTACTGTATTCTTTTCAGATGTTTTCAT
ACTAAGGGATGTTTTGGTCCACTGAAATATTATTTCAACCCCATCACATC
AATATGCTCCGCCCTTATTATTTGGGCGTTTGTGGCGTGGTGTATTCAAT
CGCCTGATGGGTCACAAGAAGTAACGACCAGATGGAAGAGTTGGATTACC
AAACACTGGACATGGTTGTACATTGGTACACAAGATGTGTGGGCTGTCTT
CATCATTTGTGTTTACTTCTCCAAATATTCTAACATGAAATTAGGTATGG
AACCCGGTATGGAATTAGACAGTTATTTTTCTTGACTGCCTCGCAATAGA
TATCGTGATGGAATGTATCCTTTTTTAAACTCAAGATAAAAAGAGAAACC
AATTTTATTACAACACATACTTCAAAGCAGCTACTTTCAATAAGGACAAG
CTTTCCACTGGAGGAAGAATCCACAAAATAGAAATATGATGTTATTATTT
CAGGGAAGGATGATGAAAAACCAGAATTTTCGAACGGAGCCTACTTCACC
ATGTTATTTGCAGCAGGAGTTGGTATTGGATTGTTTTACTTCGGTGTCGC
TGAACCCATCTTTCACCTACAACCTGGACAGTATGGAAATCGATTCTGGA
ACAGGTAAAATCGACGGTTGAATTAATTTAAGTATCACCTTTCAGTTGTT
ATGCTTCAAGGTTTTATCCATTGCATGCCTCCAAATACAAAACAAAAAAT
ATTCCTTCTAAGATATATGAAGGACTTTTTAGATATAACTAATTTAAACG
CTAGGAAAGATCTAGCAGTAACAATTAGTAACGGAAAGTTAGCTTGTATC
CCGAGGATATTCCAGCTACGGACGAGAGTGGACTCAGAATCATAAGGAAA
ATGTGTTTTTATCCTACTGACAGGTACACAGACAATCAGCAAGCACAAGA
TGCCATCAACGTGACCTTCTACCACTGGGGTATCCACGCATGGGTGGTCT
ACGTTTTGATCGGTTTATTGCTCTCCTTCTTATCCTATCGTCGCTCTCTA
CCCATGACAATGCGCATGGTCTTCTTCCCGCTGATTGGTGAAAGGGTTTA
TGGTATTCTTGGCGATTTGGTAGATATTTTGTCCATTATTTGTACCATGT
TCGGCGTGTGCACTAGTTTAGGTAGGAATGCCAATTATCGTCATGTTTTT
GTTTGTAATCGTTACGACATTCCATGGTATTCGACTCGAATTCCAAGTCC
ATTCGCTCATAGCATTTATACTTGATATATATTTTGAGAGAATTTATTAA
TGTCTGGAACTCTGTTGACAGGACTGGGTGTTGTCCAGCTGAACAATGGT
TTAAGTCGTGTCATTCCATCAATCGAGATATCGGAAACAAACCAAGTCAT
CTTGATCTGGTGTATCACATCTATTGCAACTTTATCTGTGGTTAGTGGGC
TGAAGTTTGGCATACGGACGCTCTCTGAAACATGCTTTGGTGTTGGTGAG
TATAGAGAATTTCCCCAGGAGTACTTCAGTAAGTGGTCTTGAGAAAGTTG
TACAAAGGCCAGGCCTAAAGTTAGATATCATCTTCATTAGAATACTCTCA
AGGGGAATTCCTGTTTTGCACCCGAGAGTAAAGATACTGTTACAATGTCT
ACAAATAACTGCTCTAGAAAATGCTATTTCTTTCCATAGGTTGCCTGCTA
CTTCTAATTGTTTACTTGGCTGACGATACAGTGTTTTTGACCAATTTGTT
CGTGCAGTCATGCGGATATTATTTGCAATGGATTGTACAGATAGGTTTCC
ATACTGATGCTTTTGCCATGAGAAATGATGCACCAGATGGCAAGGAAAAC
CCTCAGTGGATGGATTCGTGGACATTGTTCTATTGTGAGTCATAGTATAA
AGAAACCTTGTGGATTTCCAAGTTAGTGATAGCATGAGATTCAAACTTTT
AAAGTAATAAGTTTATAATCTAAAGCTCAGCTTAAAAGAATTACCATAAA
GAGATATCAACATTTTCTTTGACAGGGGGTTGGTGGATTAGTTGGGCACC
ATTCGTAGGGATGTTCATAGCGAAGATCAGTCGTGGTCGCACCATCAAAG
AATTCATCTTGTACACGTCAACTCTTCCAGTGATCTATACGTTCTTTTGG
TTGAGTGTGTTCGGTGGTGCTGGCATCTCCATGGAACGAAAAGCTCAGAA
TTTGAACATTACTTGTTCCATGTACAAGTAAGGCTGTTCTTTTTCTTCAC
TAAGGCATGATTGTTGTTCAATATCTAAATCGAATATTATATTATATTAT
ATGTGTTTTATCACAGCTAAAATATTTATTTTCAGTTCAACTCGATATCC
GATGTATGGAGCAGAGAATATTTGGAAGACTCATCACGTGCATCGTTTAT
CGTGTCGCACCTCCTCTCAAATGTGGTTCGATGTGGTGGAACAGTATGAA
GGTATTGGAAACCTTCTCTCCATTNATGTGGTTCGATGTGGTGGAACAGT
ATGAAGGTATTGGAAACCTTCTTTCCATCATTTCAATCATCGGTTTGATC
CTTTACTTCATCACCAGTTCTGATAGTGGTTCATTGGTCATTGATTCCCT
CTCTGCTAATGGTTATCCTGATCCACCAATTGGGCAACGCATCTTTTGGG
CGGTCACTGAGGGTGCTACGGCTACCGCCCTTCTACGCCAAGGTGGTAAA
GATGCTTTGAGGGCATTACAAGCGGTCTCTATAGCAGCTGGGTTACCATT
TACCATTATTTTGAATTTTGCTTGCATCTCTTTATGGCGAGCGATGAAAA
TGGAATATGGAGATATCAAAGAAGAAGCGGATGGTTGGAAAAGCAGTTTG
TTGACACCCATTGATTCCATAAAAGGTGTCAAGAAGATCATCCTCAATCT
TTTCTTCCCTTGGTACACACTCAGTAAAGCTGTTGTCAAGCTAGATTCGT
TAAGTTCGAG

Coding sequence (CDS) from alignment at sc0000506:25656..28915-

>TCONS_00024643 ID=TCONS_00024643|Name=TCONS_00024643|organism=Clytia hemisphaerica|type=CDS|length=11592bp|location=Sequence derived from alignment at sc0000506:25656..28915- (Clytia hemisphaerica)
TTCAACTCGATATCCGATGTATGGAGCAGAGAATATTTGGAAGACTCATC
ACGTGCATCGTTTATCGTGTCGCACCTCCTCTCAAATGTGGTTCGATGTG
GTGGAACAGTATGAAGGTATTGGAAACCTTCTCTCCATTNATGTGGTTCG
ATGTGGTGGAACAGTATGAGGGGTTGGTGGATTAGTTGGGCACCATTCGT
AGGGATGTTCATAGCGAAGATCAGTCGTGGTCGCACCATCAAAGAATTCA
TCTTGTACACGTCAACTCTTCCAGTGATCTATACGTTCTTTTGGTTGAGT
GTGTTCGGTGGTGCTGGCATCTCCATGGAACGAAAAGCTCAGAATTTGAA
CATTACTTGTTCCATGTACAAGTTGCCTGCTACTTCTAATTGTTTACTTG
GCTGACGATACAGTGTTTTTGACCAATTTGTTCGTGCAGTCATGCGGATA
TTATTTGCAATGGATTGTACAGATAGGTTTCCATACTGATGCTTTTGCCA
TGAGAAATGATGCACCAGATGGCAAGGAAAACCCTCAGTGGATGGATTCG
TGGACATTGTTCTATTGACTGGGTGTTGTCCAGCTGAACAATGGTTTAAG
TCGTGTCATTCCATCAATCGAGATATCGGAAACAAACCAAGTCATCTTGA
TCTGGTGTATCACATCTATTGCAACTTTATCTGTGGTTAGTGGGCTGAAG
TTTGGCATACGGACGCTCTCTGAAACATGCTTTGGTGTTGGTACACAGAC
AATCAGCAAGCACAAGATGCCATCAACGTGACCTTCTACCACTGGGGTAT
CCACGCATGGGTGGTCTACGTTTTGATCGGTTTATTGCTCTCCTTCTTAT
CCTATCGTCGCTCTCTACCCATGACAATGCGCATGGTCTTCTTCCCGCTG
ATTGGTGAAAGGGTTTATGGTATTCTTGGCGATTTGGTAGATATTTTGTC
CATTATTTGTACCATGTTCGGCGTGTGCACTAGTTTAGGGAAGGATGATG
AAAAACCAGAATTTTCGAACGGAGCCTACTTCACCATGTTATTTGCAGCA
GGAGTTGGTATTGGATTGTTTTACTTCGGTGTCGCTGAACCCATCTTTCA
CCTACAACCTGGACAGTATGGAAATCGATTCTGGAACAGATGTTTTCATA
CTAAGGGATGTTTTGGTCCACTGAAATATTATTTCAACCCCATCACATCA
ATATGCTCCGCCCTTATTATTTGGGCGTTTGTGGCGTGGTGTATTCAATC
GCCTGATGGGTCACAAGAAGTAACGACCAGATGGAAGAGTTGGATTACCA
AACACTGGACATGGTTGTACATTGGTACACAAGATGTGTGGGCTGTCTTC
ATCATTTGTGTTTACTTCTCCAAATATTCTAACATGAAATTAGCAGTTAG
AAGAAGGTGAAGATGTCAGCGAAAACGGTGAAGATTGTTTTCAAGACAGT
TCAACTCGATATCCGATGTATGGAGCAGAGAATATTTGGAAGACTCATCA
CGTGCATCGTTTATCGTGTCGCACCTCCTCTCAAATGTGGTTCGATGTGG
TGGAACAGTATGAAGGTATTGGAAACCTTCTCTCCATTNATGTGGTTCGA
TGTGGTGGAACAGTATGAGGGGTTGGTGGATTAGTTGGGCACCATTCGTA
GGGATGTTCATAGCGAAGATCAGTCGTGGTCGCACCATCAAAGAATTCAT
CTTGTACACGTCAACTCTTCCAGTGATCTATACGTTCTTTTGGTTGAGTG
TGTTCGGTGGTGCTGGCATCTCCATGGAACGAAAAGCTCAGAATTTGAAC
ATTACTTGTTCCATGTACAAGTTGCCTGCTACTTCTAATTGTTTACTTGG
CTGACGATACAGTGTTTTTGACCAATTTGTTCGTGCAGTCATGCGGATAT
TATTTGCAATGGATTGTACAGATAGGTTTCCATACTGATGCTTTTGCCAT
GAGAAATGATGCACCAGATGGCAAGGAAAACCCTCAGTGGATGGATTCGT
GGACATTGTTCTATTGACTGGGTGTTGTCCAGCTGAACAATGGTTTAAGT
CGTGTCATTCCATCAATCGAGATATCGGAAACAAACCAAGTCATCTTGAT
CTGGTGTATCACATCTATTGCAACTTTATCTGTGGTTAGTGGGCTGAAGT
TTGGCATACGGACGCTCTCTGAAACATGCTTTGGTGTTGGTACACAGACA
ATCAGCAAGCACAAGATGCCATCAACGTGACCTTCTACCACTGGGGTATC
CACGCATGGGTGGTCTACGTTTTGATCGGTTTATTGCTCTCCTTCTTATC
CTATCGTCGCTCTCTACCCATGACAATGCGCATGGTCTTCTTCCCGCTGA
TTGGTGAAAGGGTTTATGGTATTCTTGGCGATTTGGTAGATATTTTGTCC
ATTATTTGTACCATGTTCGGCGTGTGCACTAGTTTAGGGAAGGATGATGA
AAAACCAGAATTTTCGAACGGAGCCTACTTCACCATGTTATTTGCAGCAG
GAGTTGGTATTGGATTGTTTTACTTCGGTGTCGCTGAACCCATCTTTCAC
CTACAACCTGGACAGTATGGAAATCGATTCTGGAACAGATGTTTTCATAC
TAAGGGATGTTTTGGTCCACTGAAATATTATTTCAACCCCATCACATCAA
TATGCTCCGCCCTTATTATTTGGGCGTTTGTGGCGTGGTGTATTCAATCG
CCTGATGGGTCACAAGAAGTAACGACCAGATGGAAGAGTTGGATTACCAA
ACACTGGACATGGTTGTACATTGGTACACAAGATGTGTGGGCTGTCTTCA
TCATTTGTGTTTACTTCTCCAAATATTCTAACATGAAATTAGCAGTTAGA
AGAAGGTGAAGATGTCAGCGAAAACGGTGAAGATTGTTTTCAAGACAGTT
CAACTCGATATCCGATGTATGGAGCAGAGAATATTTGGAAGACTCATCAC
GTGCATCGTTTATCGTGTCGCACCTCCTCTCAAATGTGGTTCGATGTGGT
GGAACAGTATGAAGGTATTGGAAACCTTCTCTCCATTNATGTGGTTCGAT
GTGGTGGAACAGTATGAGGGGTTGGTGGATTAGTTGGGCACCATTCGTAG
GGATGTTCATAGCGAAGATCAGTCGTGGTCGCACCATCAAAGAATTCATC
TTGTACACGTCAACTCTTCCAGTGATCTATACGTTCTTTTGGTTGAGTGT
GTTCGGTGGTGCTGGCATCTCCATGGAACGAAAAGCTCAGAATTTGAACA
TTACTTGTTCCATGTACAAGTTGCCTGCTACTTCTAATTGTTTACTTGGC
TGACGATACAGTGTTTTTGACCAATTTGTTCGTGCAGTCATGCGGATATT
ATTTGCAATGGATTGTACAGATAGGTTTCCATACTGATGCTTTTGCCATG
AGAAATGATGCACCAGATGGCAAGGAAAACCCTCAGTGGATGGATTCGTG
GACATTGTTCTATTGACTGGGTGTTGTCCAGCTGAACAATGGTTTAAGTC
GTGTCATTCCATCAATCGAGATATCGGAAACAAACCAAGTCATCTTGATC
TGGTGTATCACATCTATTGCAACTTTATCTGTGGTTAGTGGGCTGAAGTT
TGGCATACGGACGCTCTCTGAAACATGCTTTGGTGTTGGTACACAGACAA
TCAGCAAGCACAAGATGCCATCAACGTGACCTTCTACCACTGGGGTATCC
ACGCATGGGTGGTCTACGTTTTGATCGGTTTATTGCTCTCCTTCTTATCC
TATCGTCGCTCTCTACCCATGACAATGCGCATGGTCTTCTTCCCGCTGAT
TGGTGAAAGGGTTTATGGTATTCTTGGCGATTTGGTAGATATTTTGTCCA
TTATTTGTACCATGTTCGGCGTGTGCACTAGTTTAGGGAAGGATGATGAA
AAACCAGAATTTTCGAACGGAGCCTACTTCACCATGTTATTTGCAGCAGG
AGTTGGTATTGGATTGTTTTACTTCGGTGTCGCTGAACCCATCTTTCACC
TACAACCTGGACAGTATGGAAATCGATTCTGGAACAGATGTTTTCATACT
AAGGGATGTTTTGGTCCACTGAAATATTATTTCAACCCCATCACATCAAT
ATGCTCCGCCCTTATTATTTGGGCGTTTGTGGCGTGGTGTATTCAATCGC
CTGATGGGTCACAAGAAGTAACGACCAGATGGAAGAGTTGGATTACCAAA
CACTGGACATGGTTGTACATTGGTACACAAGATGTGTGGGCTGTCTTCAT
CATTTGTGTTTACTTCTCCAAATATTCTAACATGAAATTAGCAGTTAGAA
GAAGGTGAAGATGTCAGCGAAAACGGTGAAGATTGTTTTCAAGACAGTTC
AACTCGATATCCGATGTATGGAGCAGAGAATATTTGGAAGACTCATCACG
TGCATCGTTTATCGTGTCGCACCTCCTCTCAAATGTGGTTCGATGTGGTG
GAACAGTATGAAGGTATTGGAAACCTTCTCTCCATTNATGTGGTTCGATG
TGGTGGAACAGTATGAGGGGTTGGTGGATTAGTTGGGCACCATTCGTAGG
GATGTTCATAGCGAAGATCAGTCGTGGTCGCACCATCAAAGAATTCATCT
TGTACACGTCAACTCTTCCAGTGATCTATACGTTCTTTTGGTTGAGTGTG
TTCGGTGGTGCTGGCATCTCCATGGAACGAAAAGCTCAGAATTTGAACAT
TACTTGTTCCATGTACAAGTTGCCTGCTACTTCTAATTGTTTACTTGGCT
GACGATACAGTGTTTTTGACCAATTTGTTCGTGCAGTCATGCGGATATTA
TTTGCAATGGATTGTACAGATAGGTTTCCATACTGATGCTTTTGCCATGA
GAAATGATGCACCAGATGGCAAGGAAAACCCTCAGTGGATGGATTCGTGG
ACATTGTTCTATTGACTGGGTGTTGTCCAGCTGAACAATGGTTTAAGTCG
TGTCATTCCATCAATCGAGATATCGGAAACAAACCAAGTCATCTTGATCT
GGTGTATCACATCTATTGCAACTTTATCTGTGGTTAGTGGGCTGAAGTTT
GGCATACGGACGCTCTCTGAAACATGCTTTGGTGTTGGTACACAGACAAT
CAGCAAGCACAAGATGCCATCAACGTGACCTTCTACCACTGGGGTATCCA
CGCATGGGTGGTCTACGTTTTGATCGGTTTATTGCTCTCCTTCTTATCCT
ATCGTCGCTCTCTACCCATGACAATGCGCATGGTCTTCTTCCCGCTGATT
GGTGAAAGGGTTTATGGTATTCTTGGCGATTTGGTAGATATTTTGTCCAT
TATTTGTACCATGTTCGGCGTGTGCACTAGTTTAGGGAAGGATGATGAAA
AACCAGAATTTTCGAACGGAGCCTACTTCACCATGTTATTTGCAGCAGGA
GTTGGTATTGGATTGTTTTACTTCGGTGTCGCTGAACCCATCTTTCACCT
ACAACCTGGACAGTATGGAAATCGATTCTGGAACAGATGTTTTCATACTA
AGGGATGTTTTGGTCCACTGAAATATTATTTCAACCCCATCACATCAATA
TGCTCCGCCCTTATTATTTGGGCGTTTGTGGCGTGGTGTATTCAATCGCC
TGATGGGTCACAAGAAGTAACGACCAGATGGAAGAGTTGGATTACCAAAC
ACTGGACATGGTTGTACATTGGTACACAAGATGTGTGGGCTGTCTTCATC
ATTTGTGTTTACTTCTCCAAATATTCTAACATGAAATTAGCAGTTAGAAG
AAGGTGAAGATGTCAGCGAAAACGGTGAAGATTGTTTTCAAGACAGTTCA
ACTCGATATCCGATGTATGGAGCAGAGAATATTTGGAAGACTCATCACGT
GCATCGTTTATCGTGTCGCACCTCCTCTCAAATGTGGTTCGATGTGGTGG
AACAGTATGAAGGTATTGGAAACCTTCTCTCCATTNATGTGGTTCGATGT
GGTGGAACAGTATGAGGGGTTGGTGGATTAGTTGGGCACCATTCGTAGGG
ATGTTCATAGCGAAGATCAGTCGTGGTCGCACCATCAAAGAATTCATCTT
GTACACGTCAACTCTTCCAGTGATCTATACGTTCTTTTGGTTGAGTGTGT
TCGGTGGTGCTGGCATCTCCATGGAACGAAAAGCTCAGAATTTGAACATT
ACTTGTTCCATGTACAAGTTGCCTGCTACTTCTAATTGTTTACTTGGCTG
ACGATACAGTGTTTTTGACCAATTTGTTCGTGCAGTCATGCGGATATTAT
TTGCAATGGATTGTACAGATAGGTTTCCATACTGATGCTTTTGCCATGAG
AAATGATGCACCAGATGGCAAGGAAAACCCTCAGTGGATGGATTCGTGGA
CATTGTTCTATTGACTGGGTGTTGTCCAGCTGAACAATGGTTTAAGTCGT
GTCATTCCATCAATCGAGATATCGGAAACAAACCAAGTCATCTTGATCTG
GTGTATCACATCTATTGCAACTTTATCTGTGGTTAGTGGGCTGAAGTTTG
GCATACGGACGCTCTCTGAAACATGCTTTGGTGTTGGTACACAGACAATC
AGCAAGCACAAGATGCCATCAACGTGACCTTCTACCACTGGGGTATCCAC
GCATGGGTGGTCTACGTTTTGATCGGTTTATTGCTCTCCTTCTTATCCTA
TCGTCGCTCTCTACCCATGACAATGCGCATGGTCTTCTTCCCGCTGATTG
GTGAAAGGGTTTATGGTATTCTTGGCGATTTGGTAGATATTTTGTCCATT
ATTTGTACCATGTTCGGCGTGTGCACTAGTTTAGGGAAGGATGATGAAAA
ACCAGAATTTTCGAACGGAGCCTACTTCACCATGTTATTTGCAGCAGGAG
TTGGTATTGGATTGTTTTACTTCGGTGTCGCTGAACCCATCTTTCACCTA
CAACCTGGACAGTATGGAAATCGATTCTGGAACAGATGTTTTCATACTAA
GGGATGTTTTGGTCCACTGAAATATTATTTCAACCCCATCACATCAATAT
GCTCCGCCCTTATTATTTGGGCGTTTGTGGCGTGGTGTATTCAATCGCCT
GATGGGTCACAAGAAGTAACGACCAGATGGAAGAGTTGGATTACCAAACA
CTGGACATGGTTGTACATTGGTACACAAGATGTGTGGGCTGTCTTCATCA
TTTGTGTTTACTTCTCCAAATATTCTAACATGAAATTAGCAGTTAGAAGA
AGGTGAAGATGTCAGCGAAAACGGTGAAGATTGTTTTCAAGACAGTTCAA
CTCGATATCCGATGTATGGAGCAGAGAATATTTGGAAGACTCATCACGTG
CATCGTTTATCGTGTCGCACCTCCTCTCAAATGTGGTTCGATGTGGTGGA
ACAGTATGAAGGTATTGGAAACCTTCTCTCCATTNATGTGGTTCGATGTG
GTGGAACAGTATGAGGGGTTGGTGGATTAGTTGGGCACCATTCGTAGGGA
TGTTCATAGCGAAGATCAGTCGTGGTCGCACCATCAAAGAATTCATCTTG
TACACGTCAACTCTTCCAGTGATCTATACGTTCTTTTGGTTGAGTGTGTT
CGGTGGTGCTGGCATCTCCATGGAACGAAAAGCTCAGAATTTGAACATTA
CTTGTTCCATGTACAAGTTGCCTGCTACTTCTAATTGTTTACTTGGCTGA
CGATACAGTGTTTTTGACCAATTTGTTCGTGCAGTCATGCGGATATTATT
TGCAATGGATTGTACAGATAGGTTTCCATACTGATGCTTTTGCCATGAGA
AATGATGCACCAGATGGCAAGGAAAACCCTCAGTGGATGGATTCGTGGAC
ATTGTTCTATTGACTGGGTGTTGTCCAGCTGAACAATGGTTTAAGTCGTG
TCATTCCATCAATCGAGATATCGGAAACAAACCAAGTCATCTTGATCTGG
TGTATCACATCTATTGCAACTTTATCTGTGGTTAGTGGGCTGAAGTTTGG
CATACGGACGCTCTCTGAAACATGCTTTGGTGTTGGTACACAGACAATCA
GCAAGCACAAGATGCCATCAACGTGACCTTCTACCACTGGGGTATCCACG
CATGGGTGGTCTACGTTTTGATCGGTTTATTGCTCTCCTTCTTATCCTAT
CGTCGCTCTCTACCCATGACAATGCGCATGGTCTTCTTCCCGCTGATTGG
TGAAAGGGTTTATGGTATTCTTGGCGATTTGGTAGATATTTTGTCCATTA
TTTGTACCATGTTCGGCGTGTGCACTAGTTTAGGGAAGGATGATGAAAAA
CCAGAATTTTCGAACGGAGCCTACTTCACCATGTTATTTGCAGCAGGAGT
TGGTATTGGATTGTTTTACTTCGGTGTCGCTGAACCCATCTTTCACCTAC
AACCTGGACAGTATGGAAATCGATTCTGGAACAGATGTTTTCATACTAAG
GGATGTTTTGGTCCACTGAAATATTATTTCAACCCCATCACATCAATATG
CTCCGCCCTTATTATTTGGGCGTTTGTGGCGTGGTGTATTCAATCGCCTG
ATGGGTCACAAGAAGTAACGACCAGATGGAAGAGTTGGATTACCAAACAC
TGGACATGGTTGTACATTGGTACACAAGATGTGTGGGCTGTCTTCATCAT
TTGTGTTTACTTCTCCAAATATTCTAACATGAAATTAGCAGTTAGAAGAA
GGTGAAGATGTCAGCGAAAACGGTGAAGATTGTTTTCAAGACAGTTCAAC
TCGATATCCGATGTATGGAGCAGAGAATATTTGGAAGACTCATCACGTGC
ATCGTTTATCGTGTCGCACCTCCTCTCAAATGTGGTTCGATGTGGTGGAA
CAGTATGAAGGTATTGGAAACCTTCTCTCCATTNATGTGGTTCGATGTGG
TGGAACAGTATGAGGGGTTGGTGGATTAGTTGGGCACCATTCGTAGGGAT
GTTCATAGCGAAGATCAGTCGTGGTCGCACCATCAAAGAATTCATCTTGT
ACACGTCAACTCTTCCAGTGATCTATACGTTCTTTTGGTTGAGTGTGTTC
GGTGGTGCTGGCATCTCCATGGAACGAAAAGCTCAGAATTTGAACATTAC
TTGTTCCATGTACAAGTTGCCTGCTACTTCTAATTGTTTACTTGGCTGAC
GATACAGTGTTTTTGACCAATTTGTTCGTGCAGTCATGCGGATATTATTT
GCAATGGATTGTACAGATAGGTTTCCATACTGATGCTTTTGCCATGAGAA
ATGATGCACCAGATGGCAAGGAAAACCCTCAGTGGATGGATTCGTGGACA
TTGTTCTATTGACTGGGTGTTGTCCAGCTGAACAATGGTTTAAGTCGTGT
CATTCCATCAATCGAGATATCGGAAACAAACCAAGTCATCTTGATCTGGT
GTATCACATCTATTGCAACTTTATCTGTGGTTAGTGGGCTGAAGTTTGGC
ATACGGACGCTCTCTGAAACATGCTTTGGTGTTGGTACACAGACAATCAG
CAAGCACAAGATGCCATCAACGTGACCTTCTACCACTGGGGTATCCACGC
ATGGGTGGTCTACGTTTTGATCGGTTTATTGCTCTCCTTCTTATCCTATC
GTCGCTCTCTACCCATGACAATGCGCATGGTCTTCTTCCCGCTGATTGGT
GAAAGGGTTTATGGTATTCTTGGCGATTTGGTAGATATTTTGTCCATTAT
TTGTACCATGTTCGGCGTGTGCACTAGTTTAGGGAAGGATGATGAAAAAC
CAGAATTTTCGAACGGAGCCTACTTCACCATGTTATTTGCAGCAGGAGTT
GGTATTGGATTGTTTTACTTCGGTGTCGCTGAACCCATCTTTCACCTACA
ACCTGGACAGTATGGAAATCGATTCTGGAACAGATGTTTTCATACTAAGG
GATGTTTTGGTCCACTGAAATATTATTTCAACCCCATCACATCAATATGC
TCCGCCCTTATTATTTGGGCGTTTGTGGCGTGGTGTATTCAATCGCCTGA
TGGGTCACAAGAAGTAACGACCAGATGGAAGAGTTGGATTACCAAACACT
GGACATGGTTGTACATTGGTACACAAGATGTGTGGGCTGTCTTCATCATT
TGTGTTTACTTCTCCAAATATTCTAACATGAAATTAGCAGTTAGAAGAAG
GTGAAGATGTCAGCGAAAACGGTGAAGATTGTTTTCAAGACAGTTCAACT
CGATATCCGATGTATGGAGCAGAGAATATTTGGAAGACTCATCACGTGCA
TCGTTTATCGTGTCGCACCTCCTCTCAAATGTGGTTCGATGTGGTGGAAC
AGTATGAAGGTATTGGAAACCTTCTCTCCATTNATGTGGTTCGATGTGGT
GGAACAGTATGAGGGGTTGGTGGATTAGTTGGGCACCATTCGTAGGGATG
TTCATAGCGAAGATCAGTCGTGGTCGCACCATCAAAGAATTCATCTTGTA
CACGTCAACTCTTCCAGTGATCTATACGTTCTTTTGGTTGAGTGTGTTCG
GTGGTGCTGGCATCTCCATGGAACGAAAAGCTCAGAATTTGAACATTACT
TGTTCCATGTACAAGTTGCCTGCTACTTCTAATTGTTTACTTGGCTGACG
ATACAGTGTTTTTGACCAATTTGTTCGTGCAGTCATGCGGATATTATTTG
CAATGGATTGTACAGATAGGTTTCCATACTGATGCTTTTGCCATGAGAAA
TGATGCACCAGATGGCAAGGAAAACCCTCAGTGGATGGATTCGTGGACAT
TGTTCTATTGACTGGGTGTTGTCCAGCTGAACAATGGTTTAAGTCGTGTC
ATTCCATCAATCGAGATATCGGAAACAAACCAAGTCATCTTGATCTGGTG
TATCACATCTATTGCAACTTTATCTGTGGTTAGTGGGCTGAAGTTTGGCA
TACGGACGCTCTCTGAAACATGCTTTGGTGTTGGTACACAGACAATCAGC
AAGCACAAGATGCCATCAACGTGACCTTCTACCACTGGGGTATCCACGCA
TGGGTGGTCTACGTTTTGATCGGTTTATTGCTCTCCTTCTTATCCTATCG
TCGCTCTCTACCCATGACAATGCGCATGGTCTTCTTCCCGCTGATTGGTG
AAAGGGTTTATGGTATTCTTGGCGATTTGGTAGATATTTTGTCCATTATT
TGTACCATGTTCGGCGTGTGCACTAGTTTAGGGAAGGATGATGAAAAACC
AGAATTTTCGAACGGAGCCTACTTCACCATGTTATTTGCAGCAGGAGTTG
GTATTGGATTGTTTTACTTCGGTGTCGCTGAACCCATCTTTCACCTACAA
CCTGGACAGTATGGAAATCGATTCTGGAACAGATGTTTTCATACTAAGGG
ATGTTTTGGTCCACTGAAATATTATTTCAACCCCATCACATCAATATGCT
CCGCCCTTATTATTTGGGCGTTTGTGGCGTGGTGTATTCAATCGCCTGAT
GGGTCACAAGAAGTAACGACCAGATGGAAGAGTTGGATTACCAAACACTG
GACATGGTTGTACATTGGTACACAAGATGTGTGGGCTGTCTTCATCATTT
GTGTTTACTTCTCCAAATATTCTAACATGAAATTAGCAGTTAGAAGAAGG
TGAAGATGTCAGCGAAAACGGTGAAGATTGTTTTCAAGACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013836XLOC_013836Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024643-exon-sc0000506-1575043694:28858..28915TCONS_00024643-exon-sc0000506-1575043694:28858..28915Clytia hemisphaericaexon
TCONS_00024643-exon-sc0000506-1575043694:28322..28575TCONS_00024643-exon-sc0000506-1575043694:28322..28575Clytia hemisphaericaexon
TCONS_00024643-exon-sc0000506-1575043694:27962..28112TCONS_00024643-exon-sc0000506-1575043694:27962..28112Clytia hemisphaericaexon
TCONS_00024643-exon-sc0000506-1575043694:27445..27692TCONS_00024643-exon-sc0000506-1575043694:27445..27692Clytia hemisphaericaexon
TCONS_00024643-exon-sc0000506-1575043694:27121..27294TCONS_00024643-exon-sc0000506-1575043694:27121..27294Clytia hemisphaericaexon
TCONS_00024643-exon-sc0000506-1575043694:26732..26926TCONS_00024643-exon-sc0000506-1575043694:26732..26926Clytia hemisphaericaexon
TCONS_00024643-exon-sc0000506-1575043694:26389..26590TCONS_00024643-exon-sc0000506-1575043694:26389..26590Clytia hemisphaericaexon
TCONS_00024643-exon-sc0000506-1575043694:25656..26280TCONS_00024643-exon-sc0000506-1575043694:25656..26280Clytia hemisphaericaexon
TCONS_00024643-exon-sc0000506-1510915933:28858..28915TCONS_00024643-exon-sc0000506-1510915933:28858..28915Clytia hemisphaericaexon
TCONS_00024643-exon-sc0000506-1510915933:28322..28575TCONS_00024643-exon-sc0000506-1510915933:28322..28575Clytia hemisphaericaexon
TCONS_00024643-exon-sc0000506-1510915933:27962..28112TCONS_00024643-exon-sc0000506-1510915933:27962..28112Clytia hemisphaericaexon
TCONS_00024643-exon-sc0000506-1510915933:27445..27692TCONS_00024643-exon-sc0000506-1510915933:27445..27692Clytia hemisphaericaexon
TCONS_00024643-exon-sc0000506-1510915933:27121..27294TCONS_00024643-exon-sc0000506-1510915933:27121..27294Clytia hemisphaericaexon
TCONS_00024643-exon-sc0000506-1510915933:26732..26926TCONS_00024643-exon-sc0000506-1510915933:26732..26926Clytia hemisphaericaexon
TCONS_00024643-exon-sc0000506-1510915933:26389..26590TCONS_00024643-exon-sc0000506-1510915933:26389..26590Clytia hemisphaericaexon
TCONS_00024643-exon-sc0000506-1510915933:25656..26280TCONS_00024643-exon-sc0000506-1510915933:25656..26280Clytia hemisphaericaexon
TCONS_00024643-exon-sc0000506-1491911889:28858..28915TCONS_00024643-exon-sc0000506-1491911889:28858..28915Clytia hemisphaericaexon
TCONS_00024643-exon-sc0000506-1491911889:28322..28575TCONS_00024643-exon-sc0000506-1491911889:28322..28575Clytia hemisphaericaexon
TCONS_00024643-exon-sc0000506-1491911889:27962..28112TCONS_00024643-exon-sc0000506-1491911889:27962..28112Clytia hemisphaericaexon
TCONS_00024643-exon-sc0000506-1491911889:27445..27692TCONS_00024643-exon-sc0000506-1491911889:27445..27692Clytia hemisphaericaexon
TCONS_00024643-exon-sc0000506-1491911889:27121..27294TCONS_00024643-exon-sc0000506-1491911889:27121..27294Clytia hemisphaericaexon
TCONS_00024643-exon-sc0000506-1491911889:26732..26926TCONS_00024643-exon-sc0000506-1491911889:26732..26926Clytia hemisphaericaexon
TCONS_00024643-exon-sc0000506-1491911889:26389..26590TCONS_00024643-exon-sc0000506-1491911889:26389..26590Clytia hemisphaericaexon
TCONS_00024643-exon-sc0000506-1491911889:25656..26280TCONS_00024643-exon-sc0000506-1491911889:25656..26280Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024643-proteinTCONS_00024643-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000506supercontigsc0000506:25656..28915 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.125363	0.122684	0.0719101	0.138869	0.568403	0.25873	0.275021	0.231843	0.19549	0.244204	0.12877	0.446226	0.0555834	0.0145234	0.0237284	0	2.65585	2.32392	0	0.0232418	1.9164	1.64689	0.26441	0.486152	0.763973	0.35804	0.086781	0.0934623	0.115953	0.0948097
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000060BCCT_transptr
IPR018093BCCT_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
cellular_component GO:0016020 membrane
molecular_function GO:0005215 transporter activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024643 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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