TCONS_00024434 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00024434
Unique Name	TCONS_00024434
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	5757

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000492:141341..150915-
coding sequence from alignment at sc0000492:141341..150915-

transcript sequence

>TCONS_00024434 ID=TCONS_00024434|Name=TCONS_00024434|organism=Clytia hemisphaerica|type=transcript|length=5757bp
GTTTTTTGTGTACTGTGTGCATTTGTCTGTAATTCTTGTGTATGCCATGT
TTGAGAGAAAGTAACTAAAATGATAGCACATGTTTCGCTTATGAGTTTTT
GTTCGTTTTCTAATAACGAAattgtttgttattttttagaTACCAAAATG
AACCAATAAACTATAAAAAAGCGTTGTAGAGAGATGACCAATCAGGGGCT
TACTGGAATGACAATATAATGGTCAAAATGGCGGACACACGGAGGTTCAC
ACACAAAAAAGACGTTTCATTTTGGTCTACCCCTGATTTGGGTTCAGCTT
TACTAAGAATTATCAACGTAGAAGTTACCTTTTCAAATCATACACAAGAG
ATAACCAACGATAACCAACAAAAACCATTCGATAAATCTATGCAGCAAAT
CATTTTATATAActaaaaacaaatattgATGTTGGCAAACGCTTGAcaaa
tttaaaagtttcaaagaaaaaaccaAGAAGAAGATATTAAAAATAGCACC
AAACACACAAAACGTACGATGGCTGGAAATCATGGTAAGCGAAAACGCAC
ATTCTCTGAATGCgacgaaaaagtctctcaacaAATCCTGAACTTTATCG
TACAAGCGTTCAATGCTTTGAAGAATCGTAAACCGTTTTTAGAACGGGAT
TTCACCAAATCGTCCATGATACTTCCAATGCAGTATAACAACCAAATTGT
CAAGCGCATCTGTGAATTCTCCATACTGATACCAATGGAGAGGAAAGGAG
CAATTAATTGGAATCAAAACATCAGAGCACTTCTGCCAATGCATGTAGAA
GATGATGGCAACTCACTGGCTCACTCTGTATCAGTGTACATATTCGGGAT
ACAAGACAAGGCGCAACACTTAAGACAATTGATCTATCAAATGATGTTCA
TGGAAAAACAAGGCCAAGgTGAAATCTACAATCGTTGGACGGCTGATCGG
TACCAAACAATCACAGCTCTTCAGAGGTATNCAATAAACCCAATGATAAT
GCTTATGAATCGTTGGAAGATTACCGGAAACAAAATATCCCAGCGAACGT
TCCACCTAATCTCACACCGAACGCCCCACCGAATGGTCCACCCAAAGGGA
ACTGTAACCAGTGCGGAAAACagtattttcttgaaaatgctTTCGGTTTA
TGTGAAGATTGTTTTGAGACCATCAAAAAGCAACAAGAAGAAGCCGAAGA
GAAACANCTGGAAGCTATCcacattttcattttatccaacGTCATCGGTA
GACCTATTATAGTGTACACAAGATGTGAATCAAGCAACGAAAACGAATTG
GCCAATGCGATACGATATGAAGGTGTTTACCTACCCATATTGAGAATCAA
CAGTTCGTTCGAAAAATCTCCAGTTCTTGTCGGATANTCAGCAACACCTT
AGCATGCCGGTTGAAAATGATAACAACCCACAACAAGGAGCACCTGGTGC
TTATGCAGGAATCGCAGCATATCAACAGCCTCAAGGAATTAGTATGCCGC
CCATGGGGAGTGGATACCAAGCAGGTGCCCCTGGAATGGCAGCAGGGGGT
GATTACGAAGGAAGCAGAGGGATGAATAGAGAGCCTGTTGCAGCCGCGCA
GGGAGGCATTAGTGGAAAACctaaaactgaaaatgataAACTACGTAAAA
AGATATTTTGCTCAGTAGCTGGTTGTGATCAGAATGTACGTTCAATAAAG
GATAATCAATGTGAACACCATTACAATTTCAACCAACAGAAACAAGTAGA
GAAGAAAATGTGTTGGaattgcaataaaaattttgtaGATGATAACGCTC
TTGGCACGTGTACAGTATGCGTGGCGACGCAAGGTAATCTCATCAAAGAA
GCACAAcaagaaaaacaaggaaacagaAAGAATCTTAACGTTGGGCGTGG
ACCAGCTAACTTTAACGAACAAGCACCTCCCCCACAGCAGCCACCAACGG
CCAATGTTGATCTTTTCAGTCTACCGGACCTTCCCCAGGTCAAACAACCT
CCACCACAAGCAGCACCTCGTAAACGAGCAGATCAGCAGCAGCCTCAGAA
CCCGAACTTCCAGCAAGGGAATTATCAAGCCGGTNCCAAGAATTACACAA
ACGAAGATgaacaacgaccacccctacaACACCAACAACAACCACCCCTA
CAACACCAACAACAACCACCTCTACAATACCAACAACAACCACCCCTACA
ACACCAACAAAAACCACCCCTACAACACCAACAACAACCATTCATACAAC
ATTGCGTTCGTCAAAAAGCGGGCAAATGTAATAACCCAGCATCGGCAAAT
TCGNTTATCAAGGAGGACCAAGACCTGCGCAATACAATGATGTAGAGATG
CGCTCACCGAATTACGGAAATCCACCCCATCAACAACCGAATTACGGAAA
TCCCCAACAGCAACAGCAACCGTATTACGGGAACCCGCCACAACAACAGG
TGCAAGGTCAGATATTAGCAAGTTTACCTGATCTACCACAAGTTCGCCAA
CAACAACAGCAGCCACCGCAACAGAATCTTTCACCAGTACCAACTCTCTA
CGAAGGTTTCGGGCAACCGCCACACAATTTCGGTCACCAAGAAGGCCAAA
TGAAATGGCAACAACAACAAATACAGCAAGGCAAAACGTGCAAATTCTGT
AACAAGCCACCTACACACGGTGAATACTGCCAAACCTGTCACGACGTTAA
ACAACTACCGAAGTGTGGAAATCCGGACAAGGCGAACTGTCCGAACAAAG
TTGCTAACAAAGATGAGTTCATGTGTCACAACTGTATCAAAGAGCAGAGG
GATGGGTTGGAAAAGGCGTTAAACAAAGGTCGGAACCTCCCTGTTCAACA
ACAAATACCGGCGTCAGGTCAACCACAACTGCCCATACAACAACAACCAT
ACGCCATCcctcaacaacaaaatcaacCTCAATACGCCATACCTTCGCAA
CAAAACCAGATGCCATGTATGACAAGAGGTTGCACTGGATTCGCTGTTCC
GACAACAACACTATGTGACAGATGCTCCAAAGGCCAGTACCCCAATTTTC
CGCAAGCTTACGGTATGGGGGCTCCACCGCCACCGCCTCCGCAGCAACAA
TACGCCGGTGGTGGGATGCCAAGTCCGCAACCCCAAGGAGGAGAAGAAGG
ATTTCATCCACAGGCGCAGAAGTGTAAAAGTTTTGATTGTGATTTCGTTG
GGACGTTTGAGTATGGTGGTTATTGTCACGGATGTTTCTTGGAAGTCACC
AAACATGAAAACGAACGAAAAACTTTAGGATTTCAATCACAACCACCCAT
GGGCGGTAACCCGATGATGATGGCGATACCGCCCCCTAATCCAGTTCAAA
GTGCACCAATGTTTCAACAAATTCCCACAAAATGTCGGAATCCGGATTGC
GATATGTTCGGACGAGCCGATTGGAATGGATTGTGCAGCAAATGTTATCA
AATGAATAAAGTCGAACCcgattaaaatcattttaaccACTGGATTGTGT
CGTGAAATACAGATACGCCCATGTCTTGATATTCATTTAATGATAGTTAA
CGAAGCTGAAAGCACACGATGTTAAGAGAAGGAATGGTGTTGGAAATATA
CGAGTTTTGTTAGATTCGACTCGGCTTGATTTCAATTTCGATCGCAGTAC
TACGTATGTTGATTGGAGGTTGCTGCGTGGCTGCTACGAACGCAGTCTAG
GTGCTTTAATCAAACTTCAATCGCTTAACCACGATAAAAGGGTTCCAATC
TCCCGCTTTTTCTCTCAACTCCAAGTCCCCCTGAACCGCTAGTAAATTTT
TCACATCACTGGAACAGGACAGCCCCGATGACTTTGTTCGTCAAAACTTT
GTAAAGGGCATTCAGGAGAAGTCTTTTTTTGAATGTCAATCTCCATTTTT
TTGACGACTCCCTTTGTTGGGCACTTGAGAGTGTTAAAGTAATGTggatt
cgaaaaaaaaacaaattcaagaATCAATAATTCGCTCAAATGACTGTTTT
CGATTCAGAGCACGAAACAGGTGTTGTATCCTGTGGTGTCTGTAAGAAAG
CTGAACAGAATTTATGTAATCCTTCCTTTTTTTCGAGGGTTGAGTTTTta
tatacacctttttgactGTAACCgccaattaccgcgcgggcatttttttg
tccgttttaccatcctaaaaccgtcccagtcttttttttcgcaccagtta
acaatagaaaaaggtttgtgtttagggggataattaaataataaagactg
acctgaccgcgcgactacggtcgaaaagatgtattGCCAGGCCATTATAT
CGATATTTGCAGCCCAATATATCGGATTTTCTGTTTGATTAAAGCACCTT
ACCTTAACCGCTTGTAATTTTGTGTGGAGAAATCAAGAGACGGCTTCTTA
ATTATCAATAAAGGAGAGCATTTTAAATTCACTGTTATCATTAATTGGTT
TTTCGAACTattccaaaaacttttacaaaaacgtgaaaaatgaaacattc
cTGAATATGGGACTAGATAAAAATGGTTATGATTATTTACGAGACCTTTG
TTGAATTggaaaaattgttgttttgcaAACTTAAATAACGAACTATTCAA
ACTTTTGACACAGGTCTGAACTAAATTGACAGTAAAAGactaatataaat
tttatctctgttttcttttaatattttcattattttttgtattttcaaat
attttgtttcaCGATTTTTTCTTTTGCCAAAATCCAATCCAATacacaat
cacacaaaaaagtGGCACTGCAGATTTCGTAGAATTAGAAATTCTCTCTT
TTCGATTTCCAGTGTCCTGTTTGTTTACTTCATATTCTTTATTATACCCG
TgagaaataattttgataaagTTATCGTCataaatataattaaaatcttc
acaataatttttcgattttttactTCCTCATGAAATGGGACAGCGATAGT
TGTTGTCCTTAAAAAGTTGCTTTCTGAACTTGCTCGAATTTTAAGAATTA
AATTGTTTTATAAAAATCCGATAGGGGTAGAAGAGTGACAGATCTGTCAT
TCGTTCGTGTGAGTGATTCACGAGTTCTTGTCATTTTTCCTCGTTGTAAA
AGAGTCTTTGAATCTAAACGTTGCCGAGAAATTGACCTTACTGATGTGGC
TCTTGTGCTTGGGCTTTTCTGAAAATTGGTTCTATCGTACAAAATCTGAC
CAAATGCGTACGGATTGTAAATAAAGTCGTTTTTCATATGCCATTCTTTA
TAAGCAGTTTCTGCGATTTCTTGTCGTATActtttcataacttttttttc
tttcacgaACCTTTTGCGTAATTCATTCGAATATTTATCAAAAGTTTGCC
TCGATAACTCCTTATCATTCTTCTGTTTGAACCACATCTGATGCGCAAGT
AATCGAGCCACTTTTTGATGTCCCCATAAAGTTGCATAAATGAAAGCCAT
CCTGTTCGATGTATCCTTGAGATCTACCGTGGCTCCTCGTTTTAGAAGTA
GTCTAACTTCTTCTATGTGCCCAATTGAACTCGCAAGATGTAGAGCACTC
ATACCATGATCTGTTTGCCTGTAAATTGGAGGTTAAAAGTAGAGTTGATG
AATCATTGAATTATGTAATCTCTGTATGTGGATACCTTTTTACAATTTCT
CAGCTTACTACATTTATGctatatttttaaaaagcaatAAACTGTTAGGA
GAAAAATACTTCCAAAAATAAACGCCCCAATTCTTTTAAATgccccttcg
aataaac

Run BLAST on NCBI

protein sequence of TCONS_00024434-protein

>TCONS_00024434-protein ID=TCONS_00024434-protein|Name=TCONS_00024434-protein|organism=Clytia hemisphaerica|type=polypeptide|length=375bp
MRSPNYGNPPHQQPNYGNPQQQQQPYYGNPPQQQVQGQILASLPDLPQVR
QQQQQPPQQNLSPVPTLYEGFGQPPHNFGHQEGQMKWQQQQIQQGKTCKF
CNKPPTHGEYCQTCHDVKQLPKCGNPDKANCPNKVANKDEFMCHNCIKEQ
RDGLEKALNKGRNLPVQQQIPASGQPQLPIQQQPYAIPQQQNQPQYAIPS
QQNQMPCMTRGCTGFAVPTTTLCDRCSKGQYPNFPQAYGMGAPPPPPPQQ
QYAGGGMPSPQPQGGEEGFHPQAQKCKSFDCDFVGTFEYGGYCHGCFLEV
TKHENERKTLGFQSQPPMGGNPMMMAIPPPNPVQSAPMFQQIPTKCRNPD
CDMFGRADWNGLCSKCYQMNKVEPD

Run BLAST on NCBI

transcript from alignment at sc0000492:141341..150915-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00024434 ID=TCONS_00024434|Name=TCONS_00024434|organism=Clytia hemisphaerica|type=transcript|length=9575bp|location=Sequence derived from alignment at sc0000492:141341..150915- (Clytia hemisphaerica)
GTTTTTTGTGTACTGTGTGCATTTGTCTGTAATTCTTGTGTATGCCATGT
TTGAGAGAAAGTAACTAAAATGATAGCACATGTTTCGCTTATGAGTTTTT
GTTCGTTTTCTAATAACGAAATTGTTTGTTATTTTTTAGATACCAAAATG
AACCAATAAACTATAAAAAAGCGTTGTAGAGAGATGACCAATCAGGGGCT
TACTGGAATGACAATATAATGGTCAAAATGGCGGACACACGGAGGTTCAC
ACACAAAAAAGACGTTTCATTTTGGTCTACCCCTGATTTGGGTTCAGCTT
TACTAAGAATTATCAACGTAGAAGTTACCTTTTCAAATCATACACAAGAG
ATAACCAACGATAACCAACAAAAACCATTCGATAAATCTATGCAGCAAAT
CATTTTATATAACTAAAAACAAATATTGGTAGGTACTTGTGCAGCCTTTT
TGGAAATTCCCTTTGTTTGTTGAGATAATAAAGCGTTGGGTCTGAAAAAT
ACTTTACATGGTCTTTAAAGATCAATTTCATATCATTTTACATTTGCCAC
CTAGAATTTGGTTATGTCAGCTTTTCAATTTTTTCTATTTTATTCCTTTG
TACTATGAACTATGGCATTAATTTGTCAGATAAAATCAGGTGATAATTTG
ATTTTAGGAATTGTTCCCTTTTTTAGATCAAAGGTTACACCATGAGTTTT
AACCCTCACAATAGATTTTCCATTCTATAGCTTTATGTGGGTATTTTTCT
GCAACCGGACTAAGCTGAAAGATGACACATGAATTTGAAAAGTAAAGAGG
ATTTCCCTCATTCAATTACTGAATGAATCTATATTCTTGCCAATCATGGG
TAATTTTTGACTTTGAGAAGAATTGCAAGAAATTACGTGACATAAGGTTA
AACCTCGTTACCATCTTTTAAGTACTTAACCTTTGTTAATTGCAGGGGAA
ACTCTTTTGTGAAATTTAGAAGAAACAACATATATATGGTAATTTTCATT
TTCAATAAGGGTTTAAGGAGAGTAGAACTTGCTTTTAAACGTCCTTCTTC
CGTTGTTATTCTTAGAAATTCGTTATATCACTTCCAGCTTTCGAACTGTC
TAATGATGGTCCTTAATTTAGTTTAGCTGATAGATTTTATATTTCCTGTT
TTCAGAAACTTATCTTATCTTTCGACATTCTATTTATGATAATTGACTTC
GACATCGACATAAATATCCTTGAAGCAGTCATTCTTTGAATTTTTTTATT
TCCATGTACACGTTTTTTATAAGAACATCCAAAGTTTTCGAAGCCTTTGG
ATGTTCTTAACTTTTTGAGATTTAAGGCTAAAAATTTTCTTATCATGATA
ATATTATCTCATTTATCTCTCATTTTGTGAATACTTTTGTCCGTCTTCCT
AAGAAATCGGGTGTTTTAGAGTCTTCAAAGCCTTCAAATGTTCTTAACTT
GTTCTTAACATTTTGGCCATCGAAGGCTCAGTGCTTATATAGTTTGCTCT
TATAAAAAAACCTGTATTCTCTCATTAACCAATAATAGCTAGTCTTTCTT
TTATTAGATTATATATGAATATGGAAAACTATTTTCTTTTTCTCACTAAA
TCCGTCCTTAATAAATGGTTATAGGGAAAGTACTGTCTGTACACTACCCT
GTTTAAAAAATTGATGAGAAAAGCAATTTTTATTGTTTATTCAGGTCTCC
AGTTGCTTAATAAGAGAAATGAATCAGTTATATACATATTTTATAAGAAT
GCATGGAAATAACATATTGATTTAGAAAAGTTAAAGCCAAAGGGGCTTCC
CCTAAAAATTCTCTTCTGAGACTTATATTATATGCCACCCAGAACTTCAC
AAGAAAAAAACCTTCGGTCAAGAAAAAAACTTATGCTTTTCATTAAAATT
AAATTTTGAGTTGGGTATTCTTATAATGAAACGAAAACTTTTCAAATGTC
ATCAATATTTTTATTCAAAGTAATTGGCCAACACATTGATATAATATGTC
CTAGCTATGATTCTTGTTTCTAGAGAAATTTGTTATCCTCTCAAGCGAAA
GTAACCCACGGTCTAATAAACATGTGTAGCGATAGAGATATTCTCGATCG
ACTCATTCTTGTGCCAAAAATGCTAAGTTGCATGCATTTCAATACCTTTA
TTATCCCCCTCCCAAAATCCTTTTCCTCTGTAGTTCATTCGGGAAAGATG
TTTCAACCACGAGGGGAATATTTATCATGTGCTATTAAAAGATAATGCTG
AATCATGAGTTTTATCATTCATGAGACATGCTTGCTCATTCTCATCTAAA
CTCTTTCTACTTTTTATTAGATGTTGGCAAACGCTTGACAAATTTAAAAG
TTTCAAAGAAAAAACCAAGAAGAAGATATTAAAAATAGCACCAAACACAC
AAAACGTACGATGGCTGGAAATCATGGTAAGCGAAAACGCACATTCTCTG
AATGCGACGAAAAAGTCTCTCAACAAATCCTGAACTTTATCGTACAAGCG
TTCAATGCTTTGAAGAATCGTAAACCGTTTTTAGAACGGGATTTCACCAA
ATCGTCCATGATACTTCCAATGCAGTATAACAACCAAATTGTCAAGCGCA
TCTGTGAATTCTCCATACTGATACCAATGGAGAGGAAAGGAGCAATTAAT
TGGAATCAAAACATCAGAGCACTTCTGCCAATGCATGTAGAAGATGATGG
CAACTCACTGGCTCACTCTGTATCAGTGTACATATTCGGGATACAAGACA
AGGCGCAACACTTAAGACAATTGATCTATCAAATGATGTTCATGGAAAAA
CAAGGCCAAGGTATTGTACTAAACAAATGAAAAATGAGGTTTTTTCCTCT
TGAGCCTAATTTCTTTGTATTTTAAAGGCCTAATAATACCTCGTTAAACT
TCAGTTGACTCTTGCTAAATCGATCTCGGACGGGGAACTTATTTCTTCGA
ATTATAGAGAGATTCGAATTATAGAAAGTATTCCAAGACGATTTCTCCTT
GATATGGAATCCACAATCGGTTCAAATTATAGAAATTATAGAATTCAAGT
TGTTTTTTCTTACTCTTGATTTTATAACGGTCGTTTCTCTTGCTTTGAAA
TATTTTTTCGAAGACGTTAATATTTTCGCTCATATCCGAATTATTTTTAT
TATTAGCTTATTTTTATTTTGATTATTATTAATTTATTCATCAAAAACTA
TTAGATATAGGGAATCATTGAATATTGCACTCAAACAGGAACACATACAC
ACAGAGAGATTTATCAGAAACCGTGTCATTTTTTTCTCGTATCTAACGCC
GTCTTATAGCTTATCGATCAGAAAGTAAAATTTATCTCTTTGAATATCTT
TTCAGGTGAAATCTACAATCGTTGGACGGCTGATCGGTACCAAACAATCA
CAGCTCTTCAGAGGTATNCAATAAACCCAATGATAATGCTTATGAATCGT
TGGAAGATTACCGGAAACAAAATATCCCAGCGAACGTTCCACCTAATCTC
ACACCGAACGCCCCACCGAATGGTCCACCCAAAGGGAACTGTAACCAGTG
CGGAAAACAGTATTTTCTTGAAAATGCTTTCGGTTTATGTGAAGATTGTT
TTGAGACCATCAAAAAGCAACAAGAAGAAGCCGAAGAGAAACANCTGGAA
GCTATCCACATTTTCATTTTATCCAACGTCATCGGTAGACCTATTATAGT
GTACACAAGATGTGAATCAAGCAACGAAAACGAATTGGCCAATGCGATAC
GATATGAAGGTGTTTACCTACCCATATTGAGAATCAACAGTTCGTTCGAA
AAATCTCCAGTTCTTGTCGGATANTCAGCAACACCTTAGCATGCCGGTTG
AAAATGATAACAACCCACAACAAGGAGCACCTGGTGCTTATGCAGGAATC
GCAGCATATCAACAGCCTCAAGGAATTAGTATGCCGCCCATGGGGAGTGG
ATACCAAGCAGGTGCCCCTGGAATGGCAGCAGGGGGTGATTACGAAGGAA
GCAGAGGGATGAATAGAGAGCCTGTTGCAGCCGCGCAGGGAGGCATTAGT
GGAAAACCTAAAACTGAAAATGATAAACTACGTAAAAAGATATTTTGCTC
AGTAGCTGGTTGTGATCAGAATGTACGTTCAATAAAGGATAATCAATGTG
AACACCATTACAATTTCAACCAACAGAAACAAGTAGAGAAGAAAATGTGT
TGGAATTGCAATAAAAATTTTGTAGATGATAACGCTCTTGGCACGTGTAC
AGTATGCGTGGCGACGCAAGGTAATCTCATCAAAGAAGCACAACAAGAAA
AACAAGGAAACAGAAAGAATCTTAACGTTGGGCGTGGACCAGCTAACTTT
AACGAACAAGCACCTCCCCCACAGCAGCCACCAACGGCCAATGTTGATCT
TTTCAGTCTACCGGACCTTCCCCAGGTCAAACAACCTCCACCACAAGCAG
CACCTCGTAAACGAGCAGATCAGCAGCAGCCTCAGAACCCGAACTTCCAG
CAAGGGAATTATCAAGCCGGTNCCAAGAATTACACAAACGAAGATGAACA
ACGACCACCCCTACAACACCAACAACAACCACCCCTACAACACCAACAAC
AACCACCTCTACAATACCAACAACAACCACCCCTACAACACCAACAAAAA
CCACCCCTACAACACCAACAACAACCATTCATACAACATTGCGTTCGTCA
AAAAGCGGGCAAATGTAATAACCCAGCATCGGCAAATTCGNTTATCAAGG
AGGACCAAGACCTGCGCAATACAATGATGTAGAGATGCGCTCACCGAATT
ACGGAAATCCACCCCATCAACAACCGAATTACGGAAATCCCCAACAGCAA
CAGCAACCGTATTACGGGAACCCGCCACAACAACAGGTGCAAGGTCAGAT
ATTAGCAAGTTTACCTGATCTACCACAAGTTCGCCAACAACAACAGCAGC
CACCGCAACAGAATCTTTCACCAGTACCAACTCTCTACGAAGGTTTCGGG
CAACCGCCACACAATTTCGGTCACCAAGAAGGCCAAATGAAATGGCAACA
ACAACAAATACAGCAAGGCAAAACGTGCAAATTCTGTAACAAGCCACCTA
CACACGGTGAATACTGCCAAACCTGTCACGACGTTAAACAACTACCGAAG
TGTGGAAATCCGGACAAGGCNGCACAGCAACAAAATGTACAACCTCTACC
AGCTATGGACGATTATAACCGTATTGGGCTATGCTTCCAATGTAACCAAA
GGCCCTCCAATACCTCGTATGATAAGATGTGTCGAAAATGTTTCGAAGAT
AAAATTCGTAATACGAAGCCAGGAGATGATGACGTGTTCGCNGACGTTAA
ACAACTACCGAAGTGTGGAAATCCGGACAAGGCGAACTGTCCGAACAAAG
TTGCTAACAAAGATGAGTTCATGTGTCACAACTGTATCAAAGAGCAGAGG
GATGGGTTGGAAAAGGCGTTAAACAAAGGTCGGAACCTCCCTGTTCAACA
ACAAATACCGGCGTCAGGTCAACCACAACTGCCCATACAACAACAACCAT
ACGCCATCCCTCAACAACAAAATCAACCTCAATACGCCATACCTTCGCAA
CAAAACCAGGTAATTATTTTTGGTTTCTCTTTACCACCTTTTAATTAAAC
TAATTAAACTATTCATTATGGTAAATTTGATTAGGATTTAGATTTTCTAC
GTACGATTATTGTGAATCAAGAGCTAATATGGACACTTGCTAGTTTAAGT
TACAAGGTCCTTTTTCCCGGCTTCCTATAACATCACTTATATACGTTTTC
TCTGTTTGATGGTTTTCTTTTTCGTTGATCAACTTTTGAATAGCGACTGT
AGCGCGGAGGCAGATCGACTCCGGTCGCAGATTTACCTGCTCTTAGTTTC
CAAATAAACGCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTATTATTTTTAGAAATTTTTCAGCTTTCAAAGAGAAGGTCCCT
TATTCTGCTCTAAATAGCCTGATTTTAGCCTATATTTACCTTATTTTTGA
GTTTTCGCAAGTACAATTTTCAACCCCCCCCCGGCCGTTTATTTGGAACC
TAAGAGTACTTACTTTATAGGCAGAGTATTCCTCGAAATATTCTACTTAC
TCTTTTATATTATTATTTGTATGTTTTTACTTTTGTTAGCCTGAGGATGA
ACGTAAGGTGGAAATATATTGCAATATTTTGCATACCCAGCCAAAATATT
CTACGGTCAGTTTTTTACATTCAAATATTAACTTTTTAACTTCTCGTTAT
TCAGATGCCATGTATGACAAGAGGTTGCACTGGATTCGCTGTTCCGACAA
CAACACTATGTGACAGATGCTCCAAAGGCCAGTACCCCAATTTTCCGCAA
GCTTACGGTATGGGGGCTCCACCGCCACCGCCTCCGCAGCAACAATACGC
CGGTGGTGGGATGCCAAGTCCGCAACCCCAAGGAGGAGAAGAAGGATTTC
ATCCACAGGCGCAGAAGTGTAAAAGTTTTGATTGTGATTTCGTTGGGACG
TTTGAGTATGGTGGTTATTGTCACGGATGTTTCTTGGAAGTCACCAAACA
TGAAAACGAACGAAAAAGTAAGTCAATTAATTTACTGTTTAATAAAGCTT
TAAATATATGCATTCTTCGAAGAAAAAATTACTCCAGTCCCATTTATGAA
AGACTGCAACTTAAAGATTATCACCAAGTAACCTCAGGTCAGGGACCTTT
TTTCTCGATTCTCAAAATAACTCACATATCTTTTTGATAGCTTTAGGATT
TCAATCACAACCACCCATGGGCGGTAACCCGATGATGATGGCGATACCGC
CCCCTAATCCAGTTCAAAGTGCACCAATGTTTCAACAAATTCCCACAAAA
TGTCGGAATCCGGATTGCGATATGTTCGGACGAGCCGATTGGAATGGATT
GTGCAGCAAATGTTATCAAATGAATAAAGTCGAACCCGATTAAAATCATT
TTAACCACTGGATTGTGTCGTGAAATACAGATACGCCCATGTCTTGATAT
TCATTTAATGATAGTTAACGAAGCTGAAAGCACACGATGTTAAGAGAAGG
AATGGTGTTGGAAATATACGAGTTTTGTTAGATTCGACTCGGCTTGATTT
CAATTTCGATCGCAGTACTACGTATGTTGATTGGAGGTTGCTGCGTGGCT
GCTACGAACGCAGTCTAGGTGCTTTAATCAAACTTCAATCGCTTAACCAC
GATAAAAGGGTTCCAATCTCCCGCTTTTTCTCTCAACTCCAAGTCCCCCT
GAACCGCTAGTAAATTTTTCACATCACTGGAACAGGACAGCCCCGATGAC
TTTGTTCGTCAAAACTTTGTAAAGGGCATTCAGGAGAAGTCTTTTTTTGA
ATGTCAATCTCCATTTTTTTGACGACTCCCTTTGTTGGGCACTTGAGAGT
GTTAAAGTAATGTGGATTCGAAAAAAAAACAAATTCAAGAATCAATAATT
CGCTCAAATGACTGTTTTCGATTCAGAGCACGAAACAGGTGTTGTATCCT
GTGGTGTCTGTAAGAAAGCTGAACAGAATTTATGTAATCCTTCCTTTTTT
TCGAGGGTTGAGTTTTTATATACACCTTTTTGACTGTAACCGCCAATTAC
CGCGCGGGCATTTTTTTGTCCGTTTTACCATCCTAAAACCGTCCCAGTCT
TTTTTTTCGCACCAGTTAACAATAGAAAAAGGTTTGTGTTTAGGGGGATA
ATTAAATAATAAAGACTGACCTGACCGCGCGACTACGGTCGAAAAGATGT
ATTGCCAGGCCATTATATCGATATTTGCAGCCCAATATATCGGATTTTCT
GTTTGATTAAAGCACCTTACCTTAACCGCTTGTAATTTTGTGTGGAGAAA
TCAAGAGACGGCTTCTTAATTATCAATAAAGGAGAGCATTTTAAATTCAC
TGTTATCATTAATTGGTTTTTCGAACTATTCCAAAAACTTTTACAAAAAC
GTGAAAAATGAAACATTCCTGAATATGGGACTAGATAAAAATGGTTATGA
TTATTTACGAGACCTTTGTTGAATTGGAAAAATTGTTGTTTTGCAAACTT
AAATAACGAACTATTCAAACTTTTGACACAGGTCTGAACTAAATTGACAG
TAAAAGACTAATATAAATTTTATCTCTGTTTTCTTTTAATATTTTCATTA
TTTTTTGTATTTTCAAATATTTTGTTTCACGATTTTTTCTTTTGCCAAAA
TCCAATCCAATACACAATCACACAAAAAAGTGGCACTGCAGATTTCGTAG
AATTAGAAATTCTCTCTTTTCGATTTCCAGTGTCCTGTTTGTTTACTTCA
TATTCTTTATTATACCCGTGAGAAATAATTTTGATAAAGTTATCGTCATA
AATATAATTAAAATCTTCACAATAATTTTTCGATTTTTTACTTCCTCATG
AAATGGGACAGCGATAGTTGTTGTCCTTAAAAAGTTGCTTTCTGAACTTG
CTCGAATTTTAAGAATTAAATTGTTTTATAAAAATCCGATAGGGGTAGAA
GAGTGACAGATCTGTCATTCGTTCGTGTGAGTGATTCACGAGTTCTTGTC
ATTTTTCCTCGTTGTAAAAGAGTCTTTGAATCTAAACGTTGCCGAGAAAT
TGACCTTACTGATGTGGCTCTTGTGCTTGGGCTTTTCTGAAAATTGGTTC
TATCGTACAAAATCTGACCAAATGCGTACGGATTGTAAATAAAGTCGTTT
TTCATATGCCATTCTTTATAAGCAGTTTCTGCGATTTCTTGTCGTATACT
TTTCATAACTTTTTTTTCTTTCACGAACCTTTTGCGTAATTCATTCGAAT
ATTTATCAAAAGTTTGCCTCGATAACTCCTTATCATTCTTCTGTTTGAAC
CACATCTGATGCGCAAGTAATCGAGCCACTTTTTGATGTCCCCATAAAGT
TGCATAAATGAAAGCCATCCTGTTCGATGTATCCTTGAGATCTACCGTGG
CTCCTCGTTTTAGAAGTAGTCTAACTTCTTCTATGTGCCCAATTGAACTC
GCAAGATGTAGAGCACTCATACCATGATCTGTTTGCCTGTAAATTGGAGG
TTAAAAGTAGAGTTGATGAATCATTGAATTATGTAATCTCTGTATGTGGA
TACCTTTTTACAATTTCTCAGCTTACTACATTTATGCTATATTTTTAAAA
AGCAATAAACTGTTAGGAGAAAAATACTTCCAAAAATAAACGCCCCAATT
CTTTTAAATGCCCCTTCGAATAAAC

Coding sequence (CDS) from alignment at sc0000492:141341..150915-

>TCONS_00024434 ID=TCONS_00024434|Name=TCONS_00024434|organism=Clytia hemisphaerica|type=CDS|length=4512bp|location=Sequence derived from alignment at sc0000492:141341..150915- (Clytia hemisphaerica)
CTTTAGGATTTCAATCACAACCACCCATGGGCGGTAACCCGATGATGATG
GCGATACCGCCCCCTAATCCAGTTCAAAGTGCACCAATGTTTCAACAAAT
TCCCACAAAATGTCGGAATCCGGATTGCGATATGTTCGGACGAGCCGATT
GGAATGGATTGTGCAGCAAATGTTATCAAATGAATAAAGTCGAACCCGAT
TAAATGCCATGTATGACAAGAGGTTGCACTGGATTCGCTGTTCCGACAAC
AACACTATGTGACAGATGCTCCAAAGGCCAGTACCCCAATTTTCCGCAAG
CTTACGGTATGGGGGCTCCACCGCCACCGCCTCCGCAGCAACAATACGCC
GGTGGTGGGATGCCAAGTCCGCAACCCCAAGGAGGAGAAGAAGGATTTCA
TCCACAGGCGCAGAAGTGTAAAAGTTTTGATTGTGATTTCGTTGGGACGT
TTGAGTATGGTGGTTATTGTCACGGATGTTTCTTGGAAGTCACCAAACAT
GAAAACGAACGAAAAAGCGAACTGTCCGAACAAAGTTGCTAACAAAGATG
AGTTCATGTGTCACAACTGTATCAAAGAGCAGAGGGATGGGTTGGAAAAG
GCGTTAAACAAAGGTCGGAACCTCCCTGTTCAACAACAAATACCGGCGTC
AGGTCAACCACAACTGCCCATACAACAACAACCATACGCCATCCCTCAAC
AACAAAATCAACCTCAATACGCCATACCTTCGCAACAAAACCAGATGCGC
TCACCGAATTACGGAAATCCACCCCATCAACAACCGAATTACGGAAATCC
CCAACAGCAACAGCAACCGTATTACGGGAACCCGCCACAACAACAGGTGC
AAGGTCAGATATTAGCAAGTTTACCTGATCTACCACAAGTTCGCCAACAA
CAACAGCAGCCACCGCAACAGAATCTTTCACCAGTACCAACTCTCTACGA
AGGTTTCGGGCAACCGCCACACAATTTCGGTCACCAAGAAGGCCAAATGA
AATGGCAACAACAACAAATACAGCAAGGCAAAACGTGCAAATTCTGTAAC
AAGCCACCTACACACGGTGAATACTGCCAAACCTGTCACGACGTTAAACA
ACTACCGAAGTGTGGAAATCCGGACAAGCTTTAGGATTTCAATCACAACC
ACCCATGGGCGGTAACCCGATGATGATGGCGATACCGCCCCCTAATCCAG
TTCAAAGTGCACCAATGTTTCAACAAATTCCCACAAAATGTCGGAATCCG
GATTGCGATATGTTCGGACGAGCCGATTGGAATGGATTGTGCAGCAAATG
TTATCAAATGAATAAAGTCGAACCCGATTAAATGCCATGTATGACAAGAG
GTTGCACTGGATTCGCTGTTCCGACAACAACACTATGTGACAGATGCTCC
AAAGGCCAGTACCCCAATTTTCCGCAAGCTTACGGTATGGGGGCTCCACC
GCCACCGCCTCCGCAGCAACAATACGCCGGTGGTGGGATGCCAAGTCCGC
AACCCCAAGGAGGAGAAGAAGGATTTCATCCACAGGCGCAGAAGTGTAAA
AGTTTTGATTGTGATTTCGTTGGGACGTTTGAGTATGGTGGTTATTGTCA
CGGATGTTTCTTGGAAGTCACCAAACATGAAAACGAACGAAAAAGCGAAC
TGTCCGAACAAAGTTGCTAACAAAGATGAGTTCATGTGTCACAACTGTAT
CAAAGAGCAGAGGGATGGGTTGGAAAAGGCGTTAAACAAAGGTCGGAACC
TCCCTGTTCAACAACAAATACCGGCGTCAGGTCAACCACAACTGCCCATA
CAACAACAACCATACGCCATCCCTCAACAACAAAATCAACCTCAATACGC
CATACCTTCGCAACAAAACCAGATGCGCTCACCGAATTACGGAAATCCAC
CCCATCAACAACCGAATTACGGAAATCCCCAACAGCAACAGCAACCGTAT
TACGGGAACCCGCCACAACAACAGGTGCAAGGTCAGATATTAGCAAGTTT
ACCTGATCTACCACAAGTTCGCCAACAACAACAGCAGCCACCGCAACAGA
ATCTTTCACCAGTACCAACTCTCTACGAAGGTTTCGGGCAACCGCCACAC
AATTTCGGTCACCAAGAAGGCCAAATGAAATGGCAACAACAACAAATACA
GCAAGGCAAAACGTGCAAATTCTGTAACAAGCCACCTACACACGGTGAAT
ACTGCCAAACCTGTCACGACGTTAAACAACTACCGAAGTGTGGAAATCCG
GACAAGCTTTAGGATTTCAATCACAACCACCCATGGGCGGTAACCCGATG
ATGATGGCGATACCGCCCCCTAATCCAGTTCAAAGTGCACCAATGTTTCA
ACAAATTCCCACAAAATGTCGGAATCCGGATTGCGATATGTTCGGACGAG
CCGATTGGAATGGATTGTGCAGCAAATGTTATCAAATGAATAAAGTCGAA
CCCGATTAAATGCCATGTATGACAAGAGGTTGCACTGGATTCGCTGTTCC
GACAACAACACTATGTGACAGATGCTCCAAAGGCCAGTACCCCAATTTTC
CGCAAGCTTACGGTATGGGGGCTCCACCGCCACCGCCTCCGCAGCAACAA
TACGCCGGTGGTGGGATGCCAAGTCCGCAACCCCAAGGAGGAGAAGAAGG
ATTTCATCCACAGGCGCAGAAGTGTAAAAGTTTTGATTGTGATTTCGTTG
GGACGTTTGAGTATGGTGGTTATTGTCACGGATGTTTCTTGGAAGTCACC
AAACATGAAAACGAACGAAAAAGCGAACTGTCCGAACAAAGTTGCTAACA
AAGATGAGTTCATGTGTCACAACTGTATCAAAGAGCAGAGGGATGGGTTG
GAAAAGGCGTTAAACAAAGGTCGGAACCTCCCTGTTCAACAACAAATACC
GGCGTCAGGTCAACCACAACTGCCCATACAACAACAACCATACGCCATCC
CTCAACAACAAAATCAACCTCAATACGCCATACCTTCGCAACAAAACCAG
ATGCGCTCACCGAATTACGGAAATCCACCCCATCAACAACCGAATTACGG
AAATCCCCAACAGCAACAGCAACCGTATTACGGGAACCCGCCACAACAAC
AGGTGCAAGGTCAGATATTAGCAAGTTTACCTGATCTACCACAAGTTCGC
CAACAACAACAGCAGCCACCGCAACAGAATCTTTCACCAGTACCAACTCT
CTACGAAGGTTTCGGGCAACCGCCACACAATTTCGGTCACCAAGAAGGCC
AAATGAAATGGCAACAACAACAAATACAGCAAGGCAAAACGTGCAAATTC
TGTAACAAGCCACCTACACACGGTGAATACTGCCAAACCTGTCACGACGT
TAAACAACTACCGAAGTGTGGAAATCCGGACAAGCTTTAGGATTTCAATC
ACAACCACCCATGGGCGGTAACCCGATGATGATGGCGATACCGCCCCCTA
ATCCAGTTCAAAGTGCACCAATGTTTCAACAAATTCCCACAAAATGTCGG
AATCCGGATTGCGATATGTTCGGACGAGCCGATTGGAATGGATTGTGCAG
CAAATGTTATCAAATGAATAAAGTCGAACCCGATTAAATGCCATGTATGA
CAAGAGGTTGCACTGGATTCGCTGTTCCGACAACAACACTATGTGACAGA
TGCTCCAAAGGCCAGTACCCCAATTTTCCGCAAGCTTACGGTATGGGGGC
TCCACCGCCACCGCCTCCGCAGCAACAATACGCCGGTGGTGGGATGCCAA
GTCCGCAACCCCAAGGAGGAGAAGAAGGATTTCATCCACAGGCGCAGAAG
TGTAAAAGTTTTGATTGTGATTTCGTTGGGACGTTTGAGTATGGTGGTTA
TTGTCACGGATGTTTCTTGGAAGTCACCAAACATGAAAACGAACGAAAAA
GCGAACTGTCCGAACAAAGTTGCTAACAAAGATGAGTTCATGTGTCACAA
CTGTATCAAAGAGCAGAGGGATGGGTTGGAAAAGGCGTTAAACAAAGGTC
GGAACCTCCCTGTTCAACAACAAATACCGGCGTCAGGTCAACCACAACTG
CCCATACAACAACAACCATACGCCATCCCTCAACAACAAAATCAACCTCA
ATACGCCATACCTTCGCAACAAAACCAGATGCGCTCACCGAATTACGGAA
ATCCACCCCATCAACAACCGAATTACGGAAATCCCCAACAGCAACAGCAA
CCGTATTACGGGAACCCGCCACAACAACAGGTGCAAGGTCAGATATTAGC
AAGTTTACCTGATCTACCACAAGTTCGCCAACAACAACAGCAGCCACCGC
AACAGAATCTTTCACCAGTACCAACTCTCTACGAAGGTTTCGGGCAACCG
CCACACAATTTCGGTCACCAAGAAGGCCAAATGAAATGGCAACAACAACA
AATACAGCAAGGCAAAACGTGCAAATTCTGTAACAAGCCACCTACACACG
GTGAATACTGCCAAACCTGTCACGACGTTAAACAACTACCGAAGTGTGGA
AATCCGGACAAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_013715	XLOC_013715	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00024434-protein	TCONS_00024434-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000492	supercontig	sc0000492:141341..150915 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.99323	5.68091	2.28081	2.59423	23.198	18.904	17.7592	19.3896	12.7242	21.8707	17.6825	11.0104	33.3701	29.8426	21.8214	22.7857	16.8807	19.5626	31.3762	31.6301	20.3576	20.8829	17.1245	23.6022	43.7488	38.2825	16.8747	18.9697	20.2917	21.5262

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR002653	Znf_A20

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0003677	DNA binding

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008270	zinc ion binding

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00024434 vs. Swiss-Prot (Human)

BLAST of TCONS_00024434 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00024434 (transcript) - C. hemisphaerica