XLOC_013715 (gene) - C. hemisphaerica

Overview
NameXLOC_013715
Unique NameXLOC_013715
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000492:141341..150915-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013715 ID=XLOC_013715|Name=XLOC_013715|organism=Clytia hemisphaerica|type=gene|length=9575bp|location=Sequence derived from alignment at sc0000492:141341..150915- (Clytia hemisphaerica)
GTTTTTTGTGTACTGTGTGCATTTGTCTGTAATTCTTGTGTATGCCATGT
TTGAGAGAAAGTAACTAAAATGATAGCACATGTTTCGCTTATGAGTTTTT
GTTCGTTTTCTAATAACGAAATTGTTTGTTATTTTTTAGATACCAAAATG
AACCAATAAACTATAAAAAAGCGTTGTAGAGAGATGACCAATCAGGGGCT
TACTGGAATGACAATATAATGGTCAAAATGGCGGACACACGGAGGTTCAC
ACACAAAAAAGACGTTTCATTTTGGTCTACCCCTGATTTGGGTTCAGCTT
TACTAAGAATTATCAACGTAGAAGTTACCTTTTCAAATCATACACAAGAG
ATAACCAACGATAACCAACAAAAACCATTCGATAAATCTATGCAGCAAAT
CATTTTATATAACTAAAAACAAATATTGGTAGGTACTTGTGCAGCCTTTT
TGGAAATTCCCTTTGTTTGTTGAGATAATAAAGCGTTGGGTCTGAAAAAT
ACTTTACATGGTCTTTAAAGATCAATTTCATATCATTTTACATTTGCCAC
CTAGAATTTGGTTATGTCAGCTTTTCAATTTTTTCTATTTTATTCCTTTG
TACTATGAACTATGGCATTAATTTGTCAGATAAAATCAGGTGATAATTTG
ATTTTAGGAATTGTTCCCTTTTTTAGATCAAAGGTTACACCATGAGTTTT
AACCCTCACAATAGATTTTCCATTCTATAGCTTTATGTGGGTATTTTTCT
GCAACCGGACTAAGCTGAAAGATGACACATGAATTTGAAAAGTAAAGAGG
ATTTCCCTCATTCAATTACTGAATGAATCTATATTCTTGCCAATCATGGG
TAATTTTTGACTTTGAGAAGAATTGCAAGAAATTACGTGACATAAGGTTA
AACCTCGTTACCATCTTTTAAGTACTTAACCTTTGTTAATTGCAGGGGAA
ACTCTTTTGTGAAATTTAGAAGAAACAACATATATATGGTAATTTTCATT
TTCAATAAGGGTTTAAGGAGAGTAGAACTTGCTTTTAAACGTCCTTCTTC
CGTTGTTATTCTTAGAAATTCGTTATATCACTTCCAGCTTTCGAACTGTC
TAATGATGGTCCTTAATTTAGTTTAGCTGATAGATTTTATATTTCCTGTT
TTCAGAAACTTATCTTATCTTTCGACATTCTATTTATGATAATTGACTTC
GACATCGACATAAATATCCTTGAAGCAGTCATTCTTTGAATTTTTTTATT
TCCATGTACACGTTTTTTATAAGAACATCCAAAGTTTTCGAAGCCTTTGG
ATGTTCTTAACTTTTTGAGATTTAAGGCTAAAAATTTTCTTATCATGATA
ATATTATCTCATTTATCTCTCATTTTGTGAATACTTTTGTCCGTCTTCCT
AAGAAATCGGGTGTTTTAGAGTCTTCAAAGCCTTCAAATGTTCTTAACTT
GTTCTTAACATTTTGGCCATCGAAGGCTCAGTGCTTATATAGTTTGCTCT
TATAAAAAAACCTGTATTCTCTCATTAACCAATAATAGCTAGTCTTTCTT
TTATTAGATTATATATGAATATGGAAAACTATTTTCTTTTTCTCACTAAA
TCCGTCCTTAATAAATGGTTATAGGGAAAGTACTGTCTGTACACTACCCT
GTTTAAAAAATTGATGAGAAAAGCAATTTTTATTGTTTATTCAGGTCTCC
AGTTGCTTAATAAGAGAAATGAATCAGTTATATACATATTTTATAAGAAT
GCATGGAAATAACATATTGATTTAGAAAAGTTAAAGCCAAAGGGGCTTCC
CCTAAAAATTCTCTTCTGAGACTTATATTATATGCCACCCAGAACTTCAC
AAGAAAAAAACCTTCGGTCAAGAAAAAAACTTATGCTTTTCATTAAAATT
AAATTTTGAGTTGGGTATTCTTATAATGAAACGAAAACTTTTCAAATGTC
ATCAATATTTTTATTCAAAGTAATTGGCCAACACATTGATATAATATGTC
CTAGCTATGATTCTTGTTTCTAGAGAAATTTGTTATCCTCTCAAGCGAAA
GTAACCCACGGTCTAATAAACATGTGTAGCGATAGAGATATTCTCGATCG
ACTCATTCTTGTGCCAAAAATGCTAAGTTGCATGCATTTCAATACCTTTA
TTATCCCCCTCCCAAAATCCTTTTCCTCTGTAGTTCATTCGGGAAAGATG
TTTCAACCACGAGGGGAATATTTATCATGTGCTATTAAAAGATAATGCTG
AATCATGAGTTTTATCATTCATGAGACATGCTTGCTCATTCTCATCTAAA
CTCTTTCTACTTTTTATTAGATGTTGGCAAACGCTTGACAAATTTAAAAG
TTTCAAAGAAAAAACCAAGAAGAAGATATTAAAAATAGCACCAAACACAC
AAAACGTACGATGGCTGGAAATCATGGTAAGCGAAAACGCACATTCTCTG
AATGCGACGAAAAAGTCTCTCAACAAATCCTGAACTTTATCGTACAAGCG
TTCAATGCTTTGAAGAATCGTAAACCGTTTTTAGAACGGGATTTCACCAA
ATCGTCCATGATACTTCCAATGCAGTATAACAACCAAATTGTCAAGCGCA
TCTGTGAATTCTCCATACTGATACCAATGGAGAGGAAAGGAGCAATTAAT
TGGAATCAAAACATCAGAGCACTTCTGCCAATGCATGTAGAAGATGATGG
CAACTCACTGGCTCACTCTGTATCAGTGTACATATTCGGGATACAAGACA
AGGCGCAACACTTAAGACAATTGATCTATCAAATGATGTTCATGGAAAAA
CAAGGCCAAGGTATTGTACTAAACAAATGAAAAATGAGGTTTTTTCCTCT
TGAGCCTAATTTCTTTGTATTTTAAAGGCCTAATAATACCTCGTTAAACT
TCAGTTGACTCTTGCTAAATCGATCTCGGACGGGGAACTTATTTCTTCGA
ATTATAGAGAGATTCGAATTATAGAAAGTATTCCAAGACGATTTCTCCTT
GATATGGAATCCACAATCGGTTCAAATTATAGAAATTATAGAATTCAAGT
TGTTTTTTCTTACTCTTGATTTTATAACGGTCGTTTCTCTTGCTTTGAAA
TATTTTTTCGAAGACGTTAATATTTTCGCTCATATCCGAATTATTTTTAT
TATTAGCTTATTTTTATTTTGATTATTATTAATTTATTCATCAAAAACTA
TTAGATATAGGGAATCATTGAATATTGCACTCAAACAGGAACACATACAC
ACAGAGAGATTTATCAGAAACCGTGTCATTTTTTTCTCGTATCTAACGCC
GTCTTATAGCTTATCGATCAGAAAGTAAAATTTATCTCTTTGAATATCTT
TTCAGGTGAAATCTACAATCGTTGGACGGCTGATCGGTACCAAACAATCA
CAGCTCTTCAGAGGTATNCAATAAACCCAATGATAATGCTTATGAATCGT
TGGAAGATTACCGGAAACAAAATATCCCAGCGAACGTTCCACCTAATCTC
ACACCGAACGCCCCACCGAATGGTCCACCCAAAGGGAACTGTAACCAGTG
CGGAAAACAGTATTTTCTTGAAAATGCTTTCGGTTTATGTGAAGATTGTT
TTGAGACCATCAAAAAGCAACAAGAAGAAGCCGAAGAGAAACANCTGGAA
GCTATCCACATTTTCATTTTATCCAACGTCATCGGTAGACCTATTATAGT
GTACACAAGATGTGAATCAAGCAACGAAAACGAATTGGCCAATGCGATAC
GATATGAAGGTGTTTACCTACCCATATTGAGAATCAACAGTTCGTTCGAA
AAATCTCCAGTTCTTGTCGGATANTCAGCAACACCTTAGCATGCCGGTTG
AAAATGATAACAACCCACAACAAGGAGCACCTGGTGCTTATGCAGGAATC
GCAGCATATCAACAGCCTCAAGGAATTAGTATGCCGCCCATGGGGAGTGG
ATACCAAGCAGGTGCCCCTGGAATGGCAGCAGGGGGTGATTACGAAGGAA
GCAGAGGGATGAATAGAGAGCCTGTTGCAGCCGCGCAGGGAGGCATTAGT
GGAAAACCTAAAACTGAAAATGATAAACTACGTAAAAAGATATTTTGCTC
AGTAGCTGGTTGTGATCAGAATGTACGTTCAATAAAGGATAATCAATGTG
AACACCATTACAATTTCAACCAACAGAAACAAGTAGAGAAGAAAATGTGT
TGGAATTGCAATAAAAATTTTGTAGATGATAACGCTCTTGGCACGTGTAC
AGTATGCGTGGCGACGCAAGGTAATCTCATCAAAGAAGCACAACAAGAAA
AACAAGGAAACAGAAAGAATCTTAACGTTGGGCGTGGACCAGCTAACTTT
AACGAACAAGCACCTCCCCCACAGCAGCCACCAACGGCCAATGTTGATCT
TTTCAGTCTACCGGACCTTCCCCAGGTCAAACAACCTCCACCACAAGCAG
CACCTCGTAAACGAGCAGATCAGCAGCAGCCTCAGAACCCGAACTTCCAG
CAAGGGAATTATCAAGCCGGTNCCAAGAATTACACAAACGAAGATGAACA
ACGACCACCCCTACAACACCAACAACAACCACCCCTACAACACCAACAAC
AACCACCTCTACAATACCAACAACAACCACCCCTACAACACCAACAAAAA
CCACCCCTACAACACCAACAACAACCATTCATACAACATTGCGTTCGTCA
AAAAGCGGGCAAATGTAATAACCCAGCATCGGCAAATTCGNTTATCAAGG
AGGACCAAGACCTGCGCAATACAATGATGTAGAGATGCGCTCACCGAATT
ACGGAAATCCACCCCATCAACAACCGAATTACGGAAATCCCCAACAGCAA
CAGCAACCGTATTACGGGAACCCGCCACAACAACAGGTGCAAGGTCAGAT
ATTAGCAAGTTTACCTGATCTACCACAAGTTCGCCAACAACAACAGCAGC
CACCGCAACAGAATCTTTCACCAGTACCAACTCTCTACGAAGGTTTCGGG
CAACCGCCACACAATTTCGGTCACCAAGAAGGCCAAATGAAATGGCAACA
ACAACAAATACAGCAAGGCAAAACGTGCAAATTCTGTAACAAGCCACCTA
CACACGGTGAATACTGCCAAACCTGTCACGACGTTAAACAACTACCGAAG
TGTGGAAATCCGGACAAGGCNGCACAGCAACAAAATGTACAACCTCTACC
AGCTATGGACGATTATAACCGTATTGGGCTATGCTTCCAATGTAACCAAA
GGCCCTCCAATACCTCGTATGATAAGATGTGTCGAAAATGTTTCGAAGAT
AAAATTCGTAATACGAAGCCAGGAGATGATGACGTGTTCGCNGACGTTAA
ACAACTACCGAAGTGTGGAAATCCGGACAAGGCGAACTGTCCGAACAAAG
TTGCTAACAAAGATGAGTTCATGTGTCACAACTGTATCAAAGAGCAGAGG
GATGGGTTGGAAAAGGCGTTAAACAAAGGTCGGAACCTCCCTGTTCAACA
ACAAATACCGGCGTCAGGTCAACCACAACTGCCCATACAACAACAACCAT
ACGCCATCCCTCAACAACAAAATCAACCTCAATACGCCATACCTTCGCAA
CAAAACCAGGTAATTATTTTTGGTTTCTCTTTACCACCTTTTAATTAAAC
TAATTAAACTATTCATTATGGTAAATTTGATTAGGATTTAGATTTTCTAC
GTACGATTATTGTGAATCAAGAGCTAATATGGACACTTGCTAGTTTAAGT
TACAAGGTCCTTTTTCCCGGCTTCCTATAACATCACTTATATACGTTTTC
TCTGTTTGATGGTTTTCTTTTTCGTTGATCAACTTTTGAATAGCGACTGT
AGCGCGGAGGCAGATCGACTCCGGTCGCAGATTTACCTGCTCTTAGTTTC
CAAATAAACGCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTATTATTTTTAGAAATTTTTCAGCTTTCAAAGAGAAGGTCCCT
TATTCTGCTCTAAATAGCCTGATTTTAGCCTATATTTACCTTATTTTTGA
GTTTTCGCAAGTACAATTTTCAACCCCCCCCCGGCCGTTTATTTGGAACC
TAAGAGTACTTACTTTATAGGCAGAGTATTCCTCGAAATATTCTACTTAC
TCTTTTATATTATTATTTGTATGTTTTTACTTTTGTTAGCCTGAGGATGA
ACGTAAGGTGGAAATATATTGCAATATTTTGCATACCCAGCCAAAATATT
CTACGGTCAGTTTTTTACATTCAAATATTAACTTTTTAACTTCTCGTTAT
TCAGATGCCATGTATGACAAGAGGTTGCACTGGATTCGCTGTTCCGACAA
CAACACTATGTGACAGATGCTCCAAAGGCCAGTACCCCAATTTTCCGCAA
GCTTACGGTATGGGGGCTCCACCGCCACCGCCTCCGCAGCAACAATACGC
CGGTGGTGGGATGCCAAGTCCGCAACCCCAAGGAGGAGAAGAAGGATTTC
ATCCACAGGCGCAGAAGTGTAAAAGTTTTGATTGTGATTTCGTTGGGACG
TTTGAGTATGGTGGTTATTGTCACGGATGTTTCTTGGAAGTCACCAAACA
TGAAAACGAACGAAAAAGTAAGTCAATTAATTTACTGTTTAATAAAGCTT
TAAATATATGCATTCTTCGAAGAAAAAATTACTCCAGTCCCATTTATGAA
AGACTGCAACTTAAAGATTATCACCAAGTAACCTCAGGTCAGGGACCTTT
TTTCTCGATTCTCAAAATAACTCACATATCTTTTTGATAGCTTTAGGATT
TCAATCACAACCACCCATGGGCGGTAACCCGATGATGATGGCGATACCGC
CCCCTAATCCAGTTCAAAGTGCACCAATGTTTCAACAAATTCCCACAAAA
TGTCGGAATCCGGATTGCGATATGTTCGGACGAGCCGATTGGAATGGATT
GTGCAGCAAATGTTATCAAATGAATAAAGTCGAACCCGATTAAAATCATT
TTAACCACTGGATTGTGTCGTGAAATACAGATACGCCCATGTCTTGATAT
TCATTTAATGATAGTTAACGAAGCTGAAAGCACACGATGTTAAGAGAAGG
AATGGTGTTGGAAATATACGAGTTTTGTTAGATTCGACTCGGCTTGATTT
CAATTTCGATCGCAGTACTACGTATGTTGATTGGAGGTTGCTGCGTGGCT
GCTACGAACGCAGTCTAGGTGCTTTAATCAAACTTCAATCGCTTAACCAC
GATAAAAGGGTTCCAATCTCCCGCTTTTTCTCTCAACTCCAAGTCCCCCT
GAACCGCTAGTAAATTTTTCACATCACTGGAACAGGACAGCCCCGATGAC
TTTGTTCGTCAAAACTTTGTAAAGGGCATTCAGGAGAAGTCTTTTTTTGA
ATGTCAATCTCCATTTTTTTGACGACTCCCTTTGTTGGGCACTTGAGAGT
GTTAAAGTAATGTGGATTCGAAAAAAAAACAAATTCAAGAATCAATAATT
CGCTCAAATGACTGTTTTCGATTCAGAGCACGAAACAGGTGTTGTATCCT
GTGGTGTCTGTAAGAAAGCTGAACAGAATTTATGTAATCCTTCCTTTTTT
TCGAGGGTTGAGTTTTTATATACACCTTTTTGACTGTAACCGCCAATTAC
CGCGCGGGCATTTTTTTGTCCGTTTTACCATCCTAAAACCGTCCCAGTCT
TTTTTTTCGCACCAGTTAACAATAGAAAAAGGTTTGTGTTTAGGGGGATA
ATTAAATAATAAAGACTGACCTGACCGCGCGACTACGGTCGAAAAGATGT
ATTGCCAGGCCATTATATCGATATTTGCAGCCCAATATATCGGATTTTCT
GTTTGATTAAAGCACCTTACCTTAACCGCTTGTAATTTTGTGTGGAGAAA
TCAAGAGACGGCTTCTTAATTATCAATAAAGGAGAGCATTTTAAATTCAC
TGTTATCATTAATTGGTTTTTCGAACTATTCCAAAAACTTTTACAAAAAC
GTGAAAAATGAAACATTCCTGAATATGGGACTAGATAAAAATGGTTATGA
TTATTTACGAGACCTTTGTTGAATTGGAAAAATTGTTGTTTTGCAAACTT
AAATAACGAACTATTCAAACTTTTGACACAGGTCTGAACTAAATTGACAG
TAAAAGACTAATATAAATTTTATCTCTGTTTTCTTTTAATATTTTCATTA
TTTTTTGTATTTTCAAATATTTTGTTTCACGATTTTTTCTTTTGCCAAAA
TCCAATCCAATACACAATCACACAAAAAAGTGGCACTGCAGATTTCGTAG
AATTAGAAATTCTCTCTTTTCGATTTCCAGTGTCCTGTTTGTTTACTTCA
TATTCTTTATTATACCCGTGAGAAATAATTTTGATAAAGTTATCGTCATA
AATATAATTAAAATCTTCACAATAATTTTTCGATTTTTTACTTCCTCATG
AAATGGGACAGCGATAGTTGTTGTCCTTAAAAAGTTGCTTTCTGAACTTG
CTCGAATTTTAAGAATTAAATTGTTTTATAAAAATCCGATAGGGGTAGAA
GAGTGACAGATCTGTCATTCGTTCGTGTGAGTGATTCACGAGTTCTTGTC
ATTTTTCCTCGTTGTAAAAGAGTCTTTGAATCTAAACGTTGCCGAGAAAT
TGACCTTACTGATGTGGCTCTTGTGCTTGGGCTTTTCTGAAAATTGGTTC
TATCGTACAAAATCTGACCAAATGCGTACGGATTGTAAATAAAGTCGTTT
TTCATATGCCATTCTTTATAAGCAGTTTCTGCGATTTCTTGTCGTATACT
TTTCATAACTTTTTTTTCTTTCACGAACCTTTTGCGTAATTCATTCGAAT
ATTTATCAAAAGTTTGCCTCGATAACTCCTTATCATTCTTCTGTTTGAAC
CACATCTGATGCGCAAGTAATCGAGCCACTTTTTGATGTCCCCATAAAGT
TGCATAAATGAAAGCCATCCTGTTCGATGTATCCTTGAGATCTACCGTGG
CTCCTCGTTTTAGAAGTAGTCTAACTTCTTCTATGTGCCCAATTGAACTC
GCAAGATGTAGAGCACTCATACCATGATCTGTTTGCCTGTAAATTGGAGG
TTAAAAGTAGAGTTGATGAATCATTGAATTATGTAATCTCTGTATGTGGA
TACCTTTTTACAATTTCTCAGCTTACTACATTTATGCTATATTTTTAAAA
AGCAATAAACTGTTAGGAGAAAAATACTTCCAAAAATAAACGCCCCAATT
CTTTTAAATGCCCCTTCGAATAAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00024434TCONS_00024434Clytia hemisphaericatranscript
TCONS_00024433TCONS_00024433Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00024434-proteinTCONS_00024434-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000492supercontigsc0000492:141341..150915 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.69	14.62	6.22	6.68	50.73	38.12	44	50.01	33.99	49.51	45.6	30.54	83.79	75.52	51.81	61.05	46.4	50.05	79.77	86.86	54.19	54.49	42.59	54.25	99.38	85.19	40.93	53.46	50.12	51.81