TCONS_00024302 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024302
Unique NameTCONS_00024302
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3401

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024302 ID=TCONS_00024302|Name=TCONS_00024302|organism=Clytia hemisphaerica|type=transcript|length=3401bp
GCaacaagatggttgtgtgcatgttgtgtaacttaaCGGTattaaactac
aaaatttatttacgcagacttgatgcaaattatgtttttcaagattttgt
gattttgcttCAAGTGCAAAGTAGGACAATGATCAGTCACATTTTTTGAC
CTAcatggaggtcctataaattaacctgtgtccgttcgtccgtccgtccg
tctgttccTCTGTTcctctgttaccaacttttcttgGGATTGAATAatag
gaattttttgatttttggtacaaagaggaggaggaggaggaggaggagga
ggaggaggAGGAGGAGCTCTCAGGCTTGTTTTAAATAATTTTAAATCAAG
TTATCAAAtgtttcacattttgtacattattcaacatttttagtctactc
tgtttcagtacatctcttacatctgttaacccacttattaaagctatcta
gctaagctctattggatgaccttccagcctcggctggtttatgtTCCTTT
GAATTATAGTGTtactttaaaaaatgtaaataaaaatggCAGAAGATAAC
GATTTTTCATTTGATCAACCTTGGAACCCAATCAGTTATTTTGATGAAGA
AGGGGATCAGGACAATGGTGGAGGTGGTGCCCAATATTCACCGACGCGAT
TGGCATCACTCTTTGAAGCAAATGTTTCAGCGATAGATGAGGATATCCAA
CGATCCAAAAACATtgtcaaatttgattttgacaGACAAGATGATCATTT
AGCAGCATGCGATACAAATGATGTTAATAATTTCACCCTGGAAACTGAAA
ATGGATTGAAAATGCTTGATACCACTTCAACAATtaataaaaagtcaatt
tttagtgatttagaTCGCATACGTAAATGGCAGGAACAAGCCGGTGTTGA
TAATCCTGATGAGGAacagaacgataaaaaagactTATTTTTGAGCAAAT
CCCCTGATCATCTTTTCCAATCGtcagaaaacaaagaaaaatctgGGGCC
AATATGGACGACGATGTTGACATTAGTTTACTGTTAGATCCGTTTTCTAG
TGTTGTTGATGATCATGATAAATATGAGAATCCCAACTTTGATTCAGCTA
GTCGTCTTAAAGAACTGGAAGAGCGTATGAGTGAAACTGACCATTGTACA
TTACCGACTGATATCCTTGACTTGAGCTCACCAATCAATCAGACAGAGCC
TAATAAGCTGATCTCGATAGAGTCAGgaaatgaatttgaaaataaagata
CAGTAAACAAGGAAGATGATTTTGGTGACTTATGTGATTTATTGGAGCTG
CCTGATGTGCCAACTGTATTACCCAcctcaaaaacaaatatggtTGACAA
AAAGACCACTGATGCTCAAAACAATACCGATAAAGAAATTGATGTAAAAC
CATCAATAGATACTGATGAGACTGATATTCAAACGGATTGCACCAATACT
GACCTAATTGGTGGAATTGATTCTTCTCATAATGGTAATAGTATTATTGG
TattgataataaaaattttgttattgatCAAAAAGGTGATGGTCTTGTTG
AAACTGTAGAGGATCTTATCAATTCTTCTGATACAAGTGATGCTGACCAG
GTACTCGAAATTGCCTCAAACATCACCATTAAGGATAATGAGCAGACCAC
GGAGACTGATGAATTGATTAAAATAGACTTGGATGAAAATATGGTTGATG
AATCTGAAGCTCCACCTCCATATATTGACGATGATGATTTAGAAGATGAA
TCAGTTTCAGGGGTAGAGCAAGATCCTTCTAGTGAAGATGTGGTTCCAAA
TCCTGTCAATGTTACGGATATCAGTACCCCCAATAATACTGAAATATTAA
AAGAGGTGGATCCAAAACAAAATGTATCTGAAATTATTAATGATAATGAA
AATCAAAGTGATCCAGAAATTTTAACCAATGTGGAGGGTGGAAACGTTGT
TTTAAACATGGATAATACGCCTATCAAGGATGATTCTTGCGTTGAAAATG
TGACATCTGATGATAAAACTTTTGATAAGTCTAATAATGATGTGTCGCCA
ACAGACAGCTCTGGCGATTTACCAAGCTCAGCAAGTGTAAACATTGTTTC
TGTTTCTAATGCTCTTGATTCTATGAAATGTTTAACTCCTGATGAGGATG
ATATAGAGGAAAGCCAAGATATGGAGTCTTACATGGAAACTACTGTCGGA
GAGCAGAATCCCTCCAAAGCTGTCAGCAATCTTTCAACCTCGCCAATACC
TGATGTCAATTTTGAAATCCAAGAAGATACTGGTATTAGTAATAATGTAA
ATATTGGTAATGTAGAAACAGTTGACCATGCAAGGCAGGCTGGGAATCTA
CAATCTGCCGTAGTTGAAACTCCAAGGCTAGAGAATATGGTATCTTTAGA
ACTTGAAAATGTAAATGATGTAGATACTGTCAATAATGATAATACTCGAA
AAGATGTAATTGACAAAAATACTAATATGGGAAATATTGATGAACTAGAT
ATTGAAGATTCTGCTGTTCAGGAACCATTACAGACTGTTGATACTCCTCA
AGAACCTGTCGGTTTTACTGAACAGGCAGGAGACATTTCTGATGAATTAG
ATTCTTTGTTAGACAATTTAGAGGAAGACTTAGGAATGGCGACTGAGGTC
AATGATGAAGATTCTAATACTAATACTACTCATCCTGAAGAGACATCTGT
AAGTGTTGTAGTAGAATCTGCACCTCCTCAAGAGCTTGTTTCTAATGCAG
CTTTGGCTGCTACTTGCAATGAACCAGATCATGAATCTAGTATCAATACT
GAAGCTACACCTGACGATGTTGGCGAAACTAACAATGATGAGATTCAAGT
TACAGAAGCAACAGGAAATAATATGACATCCAATGAAGAAACACCTTATG
AATCCATTGAACCAGTATCAACAATGCAAGATGGTCAAACAGAAGAGCTA
TCACCAGAATCTCTAGAAGAAACCACACCAGAATCTGATGACCAACCTCA
AGAAGGAGAAACATCAACTGAATTACGAACATCTTTGAGAAGAAATGGTG
GTACCAGTGGTTCTGGTAGACGAGTCAGATTCTCACTCAATCCTGAATAT
GAAGGAGAGAATCCAAATGCATCTGCAGGTTCACCAAACGAGCAAGGTAA
GTAGATGCTTATTTACAATGAAAAACTACTCCTTTAAACTTCCTGGAAAT
TCTTCTCAGATCTCTACCTCTGAAGAAGTTCGTCCACCTCCCCTGTATGG
ACATAGAACGTTAAAGGAATTATACGGTGTTATATACACCCGACTCGTCT
GAAACtgatgtcagcaaaattttaataaaagagtcctttcaaatttgtaa
ataaaaggaagaaaaaaatcttgctccacatttttctttattcattacaa
a
Run BLAST on NCBI

protein sequence of TCONS_00024302-protein

>TCONS_00024302-protein ID=TCONS_00024302-protein|Name=TCONS_00024302-protein|organism=Clytia hemisphaerica|type=polypeptide|length=872bp
MAEDNDFSFDQPWNPISYFDEEGDQDNGGGGAQYSPTRLASLFEANVSAI
DEDIQRSKNIVKFDFDRQDDHLAACDTNDVNNFTLETENGLKMLDTTSTI
NKKSIFSDLDRIRKWQEQAGVDNPDEEQNDKKDLFLSKSPDHLFQSSENK
EKSGANMDDDVDISLLLDPFSSVVDDHDKYENPNFDSASRLKELEERMSE
TDHCTLPTDILDLSSPINQTEPNKLISIESGNEFENKDTVNKEDDFGDLC
DLLELPDVPTVLPTSKTNMVDKKTTDAQNNTDKEIDVKPSIDTDETDIQT
DCTNTDLIGGIDSSHNGNSIIGIDNKNFVIDQKGDGLVETVEDLINSSDT
SDADQVLEIASNITIKDNEQTTETDELIKIDLDENMVDESEAPPPYIDDD
DLEDESVSGVEQDPSSEDVVPNPVNVTDISTPNNTEILKEVDPKQNVSEI
INDNENQSDPEILTNVEGGNVVLNMDNTPIKDDSCVENVTSDDKTFDKSN
NDVSPTDSSGDLPSSASVNIVSVSNALDSMKCLTPDEDDIEESQDMESYM
ETTVGEQNPSKAVSNLSTSPIPDVNFEIQEDTGISNNVNIGNVETVDHAR
QAGNLQSAVVETPRLENMVSLELENVNDVDTVNNDNTRKDVIDKNTNMGN
IDELDIEDSAVQEPLQTVDTPQEPVGFTEQAGDISDELDSLLDNLEEDLG
MATEVNDEDSNTNTTHPEETSVSVVVESAPPQELVSNAALAATCNEPDHE
SSINTEATPDDVGETNNDEIQVTEATGNNMTSNEETPYESIEPVSTMQDG
QTEELSPESLEETTPESDDQPQEGETSTELRTSLRRNGGTSGSGRRVRFS
LNPEYEGENPNASAGSPNEQGK
Run BLAST on NCBI

transcript from alignment at sc0000487:149926..154361+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024302 ID=TCONS_00024302|Name=TCONS_00024302|organism=Clytia hemisphaerica|type=transcript|length=4436bp|location=Sequence derived from alignment at sc0000487:149926..154361+ (Clytia hemisphaerica)
GCaacaagatggttgtgtgcatgttgtgtaacttaaCGGTattaaactac aaaatttatttacgcagacttgatgcaaattatgtttttcaagattttgt gattttgcttCAAGTGCAAAGTAGGACAATGATCAGTCACATTTTTTGAC CTAcatggaggtcctataaattaacctgtgtccgttcgtccgtccgtccg tctgttccTCTGTTcctctgttaccaacttttcttgGGATTGAATAatag gaattttttgatttttggtacaaagaggaggaggaggaggaggaggagga ggaggaggAGGAGGAGCTCTCAGGCTTGTTTTAAATAATTTTAAATCAAG TTATCAAAtgtttcacattttgtacattattcaacatttttagtctactc tgtttcagtacatctcttacatctgttaacccacttattaaagctatcta gctaagctctattggatgaccttccagcctcggctggtttatgtTCCTTT GAATTATAGTGTtactttaaaaaatgtaaataaaaatggCAGAAGATAAC GATTTTTCATTTGATCAACCTTGGAACCCAATCAGTTATTTTGATGAAGA AGGGGATCAGGACAATGGTGGAGGTTTGTTGAtctttttaaatatatata taaaatttacaCTTCTTGTAATCTACAAAAAGACAGCTCCAAACTTtcag gccttactcttggtctatagacactgctataggcggccactagtaaccCC CACTGGGAATTGCTTATTGATAGGTTGAAACAttagacaactttcacaaa agatgtttatcaatagagatttcaaataaaagaatattaaaaatacacag ctgattggcttaggtttctaaactctattgtttcattaaaacctcagtgc tcatgcgatttatccggagaaattcaatattaaaaacaagagcagtgctc atatcccgaagagtacgTTAGTTCGAGTTTTACCCTCGAAATGAAGGAAG TTATGACGTAGCCTACACTTCTTGTGTTTCTCTGCACAATTAAGAGTGCT CAATACTTGAGTAGAGCTTGTCACATAAAGATTGAAAAAACGGTGTATTT CTTTTCTatactttaagttttttttcttatcaactgatgaatgcgtaTAC ACAAAACTTGAATTATTGAGAAGAAAAACACTGTTTCTTCAGTATTTATG TATAAAACTTACACAATGATTCAACCTGCTTTGTGCAGATCTTTGTCAGG TCTTAAGTTATCTGACGTCAATAAAGTCAATGTAGTATATTTTCCCTGAT ATGTGAGAGATCAAGGCAATTGTCACCCAGAGACAACATAATTTTTGCAC ACATCAGACAGAAGATACTACCACAGTACATTGACTTTATTGACATCAGA TAAAGTCAAGGTATTGTCTTCAACtgtttttcttatgttttaagCCTGAC AAAGATCTGCCTTAAGCAGGTCAGAACATTGTATAAATTTAATTGTATAT ATACAATTAAATTTATACAATGTTTTGACCTGCTTAAGGATGTATATTAA ATTGACAGCTTTTTAACTATAGCTCTCTCCCAAAACAAACTTTCTTACTT ATGTCTTCATTAAAGTATTTCAACttggaaaataaaattatataaattgg TTTTTCAGGTGGTGCCCAATATTCACCGACGCGATTGGCATCACTCTTTG AAGCAAATGTTTCAGCGATAGATGAGGATATCCAACGATCCAAAAACATt gtcaaatttgattttgacaGACAAGATGATCATTTAGCAGCATGCGATAC AAATGATGTTAATAATTTCACCCTGGAAACTGAAAATGGATTGAAAATGC TTGATACCACTTCAACAATtaataaaaagtcaatttttagtgatttagaT CGCATACGTAAATGGCAGGAACAAGCCGGTGTTGATAATCCTGATGAGGA acagaacgataaaaaagactTATTTTTGAGCAAATCCCCTGATCATCTTT TCCAATCGtcagaaaacaaagaaaaatctgGGGCCAATATGGACGACGAT GTTGACATTAGTTTACTGTTAGATCCGTTTTCTAGTGTTGTTGATGATCA TGATAAATATGAGAATCCCAACTTTGATTCAGCTAGTCGTCTTAAAGAAC TGGAAGAGCGTATGAGTGAAACTGACCATTGTACATTACCGACTGATATC CTTGACTTGAGCTCACCAATCAATCAGACAGAGCCTAATAAGCTGATCTC GATAGAGTCAGgaaatgaatttgaaaataaagataCAGTAAACAAGGAAG ATGATTTTGGTGACTTATGTGATTTATTGGAGCTGCCTGATGTGCCAACT GTATTACCCAcctcaaaaacaaatatggtTGACAAAAAGACCACTGATGC TCAAAACAATACCGATAAAGAAATTGATGTAAAACCATCAATAGATACTG ATGAGACTGATATTCAAACGGATTGCACCAATACTGACCTAATTGGTGGA ATTGATTCTTCTCATAATGGTAATAGTATTATTGGTattgataataaaaa ttttgttattgatCAAAAAGGTGATGGTCTTGTTGAAACTGTAGAGGATC TTATCAATTCTTCTGATACAAGTGATGCTGACCAGGTACTCGAAATTGCC TCAAACATCACCATTAAGGATAATGAGCAGACCACGGAGACTGATGAATT GATTAAAATAGACTTGGATGAAAATATGGTTGATGAATCTGAAGCTCCAC CTCCATATATTGACGATGATGATTTAGAAGATGAATCAGTTTCAGGGGTA GAGCAAGATCCTTCTAGTGAAGATGTGGTTCCAAATCCTGTCAATGTTAC GGATATCAGTACCCCCAATAATACTGAAATATTAAAAGAGGTGGATCCAA AACAAAATGTATCTGAAATTATTAATGATAATGAAAATCAAAGTGATCCA GAAATTTTAACCAATGTGGAGGGTGGAAACGTTGTTTTAAACATGGATAA TACGCCTATCAAGGATGATTCTTGCGTTGAAAATGTGACATCTGATGATA AAACTTTTGATAAGTCTAATAATGATGTGTCGCCAACAGACAGCTCTGGC GATTTACCAAGCTCAGCAAGTGTAAACATTGTTTCTGTTTCTAATGCTCT TGATTCTATGAAATGTTTAACTCCTGATGAGGATGATATAGAGGAAAGCC AAGATATGGAGTCTTACATGGAAACTACTGTCGGAGAGCAGAATCCCTCC AAAGCTGTCAGCAATCTTTCAACCTCGCCAATACCTGATGTCAATTTTGA AATCCAAGAAGATACTGGTATTAGTAATAATGTAAATATTGGTAATGTAG AAACAGTTGACCATGCAAGGCAGGCTGGGAATCTACAATCTGCCGTAGTT GAAACTCCAAGGCTAGAGAATATGGTATCTTTAGAACTTGAAAATGTAAA TGATGTAGATACTGTCAATAATGATAATACTCGAAAAGATGTAATTGACA AAAATACTAATATGGGAAATATTGATGAACTAGATATTGAAGATTCTGCT GTTCAGGAACCATTACAGACTGTTGATACTCCTCAAGAACCTGTCGGTTT TACTGAACAGGCAGGAGACATTTCTGATGAATTAGATTCTTTGTTAGACA ATTTAGAGGAAGACTTAGGAATGGCGACTGAGGTCAATGATGAAGATTCT AATACTAATACTACTCATCCTGAAGAGACATCTGTAAGTGTTGTAGTAGA ATCTGCACCTCCTCAAGAGCTTGTTTCTAATGCAGCTTTGGCTGCTACTT GCAATGAACCAGATCATGAATCTAGTATCAATACTGAAGCTACACCTGAC GATGTTGGCGAAACTAACAATGATGAGATTCAAGTTACAGAAGCAACAGG AAATAATATGACATCCAATGAAGAAACACCTTATGAATCCATTGAACCAG TATCAACAATGCAAGATGGTCAAACAGAAGAGCTATCACCAGAATCTCTA GAAGAAACCACACCAGAATCTGATGACCAACCTCAAGAAGGAGAAACATC AACTGAATTACGAACATCTTTGAGAAGAAATGGTGGTACCAGTGGTTCTG GTAGACGAGTCAGATTCTCACTCAATCCTGAATATGAAGGAGAGAATCCA AATGCATCTGCAGGTTCACCAAACGAGCAAGGTAAGTAGATGCTTATTTA CAATGAAAAACTACTCCTTTAAACTTCCTGGAAATTCTTCTCAGATCTCT ACCTCTGAAGAAGTTCGTCCACCTCCCCTGTATGGACATAGAACGTTAAA GGAATTATACGGTGTTATATACACCCGACTCGTCTGAAACtgatgtcagc aaaattttaataaaagagtcctttcaaatttgtaaataaaaggaagaaaa aaatcttgctccacatttttctttattcattacaaa

Coding sequence (CDS) from alignment at sc0000487:149926..154361+

>TCONS_00024302 ID=TCONS_00024302|Name=TCONS_00024302|organism=Clytia hemisphaerica|type=CDS|length=5238bp|location=Sequence derived from alignment at sc0000487:149926..154361+ (Clytia hemisphaerica)
atggCAGAAGATAACGATTTTTCATTTGATCAACCTTGGAACCCAATCAG
TTATTTTGATGAAGAAGGGGATCAGGACAATGGTGGAGGTGGTGCCCAAT
ATTCACCGACGCGATTGGCATCACTCTTTGAAGCAAATGTTTCAGCGATA
GATGAGGATATCCAACGATCCAAAAACATtgtcaaatttgattttgacaG
ACAAGATGATCATTTAGCAGCATGCGATACAAATGATGTTAATAATTTCA
CCCTGGAAACTGAAAATGGATTGAAAATGCTTGATACCACTTCAACAATt
aataaaaagtcaatttttagtgatttagaTCGCATACGTAAATGGCAGGA
ACAAGCCGGTGTTGATAATCCTGATGAGGAacagaacgataaaaaagact
TATTTTTGAGCAAATCCCCTGATCATCTTTTCCAATCGtcagaaaacaaa
gaaaaatctgGGGCCAATATGGACGACGATGTTGACATTAGTTTACTGTT
AGATCCGTTTTCTAGTGTTGTTGATGATCATGATAAATATGAGAATCCCA
ACTTTGATTCAGCTAGTCGTCTTAAAGAACTGGAAGAGCGTATGAGTGAA
ACTGACCATTGTACATTACCGACTGATATCCTTGACTTGAGCTCACCAAT
CAATCAGACAGAGCCTAATAAGCTGATCTCGATAGAGTCAGgaaatgaat
ttgaaaataaagataCAGTAAACAAGGAAGATGATTTTGGTGACTTATGT
GATTTATTGGAGCTGCCTGATGTGCCAACTGTATTACCCAcctcaaaaac
aaatatggtTGACAAAAAGACCACTGATGCTCAAAACAATACCGATAAAG
AAATTGATGTAAAACCATCAATAGATACTGATGAGACTGATATTCAAACG
GATTGCACCAATACTGACCTAATTGGTGGAATTGATTCTTCTCATAATGG
TAATAGTATTATTGGTattgataataaaaattttgttattgatCAAAAAG
GTGATGGTCTTGTTGAAACTGTAGAGGATCTTATCAATTCTTCTGATACA
AGTGATGCTGACCAGGTACTCGAAATTGCCTCAAACATCACCATTAAGGA
TAATGAGCAGACCACGGAGACTGATGAATTGATTAAAATAGACTTGGATG
AAAATATGGTTGATGAATCTGAAGCTCCACCTCCATATATTGACGATGAT
GATTTAGAAGATGAATCAGTTTCAGGGGTAGAGCAAGATCCTTCTAGTGA
AGATGTGGTTCCAAATCCTGTCAATGTTACGGATATCAGTACCCCCAATA
ATACTGAAATATTAAAAGAGGTGGATCCAAAACAAAATGTATCTGAAATT
ATTAATGATAATGAAAATCAAAGTGATCCAGAAATTTTAACCAATGTGGA
GGGTGGAAACGTTGTTTTAAACATGGATAATACGCCTATCAAGGATGATT
CTTGCGTTGAAAATGTGACATCTGATGATAAAACTTTTGATAAGTCTAAT
AATGATGTGTCGCCAACAGACAGCTCTGGCGATTTACCAAGCTCAGCAAG
TGTAAACATTGTTTCTGTTTCTAATGCTCTTGATTCTATGAAATGTTTAA
CTCCTGATGAGGATGATATAGAGGAAAGCCAAGATATGGAGTCTTACATG
GAAACTACTGTCGGAGAGCAGAATCCCTCCAAAGCTGTCAGCAATCTTTC
AACCTCGCCAATACCTGATGTCAATTTTGAAATCCAAGAAGATACTGGTA
TTAGTAATAATGTAAATATTGGTAATGTAGAAACAGTTGACCATGCAAGG
CAGGCTGGGAATCTACAATCTGCCGTAGTTGAAACTCCAAGGCTAGAGAA
TATGGTATCTTTAGAACTTGAAAATGTAAATGATGTAGATACTGTCAATA
ATGATAATACTCGAAAAGATGTAATTGACAAAAATACTAATATGGGAAAT
ATTGATGAACTAGATATTGAAGATTCTGCTGTTCAGGAACCATTACAGAC
TGTTGATACTCCTCAAGAACCTGTCGGTTTTACTGAACAGGCAGGAGACA
TTTCTGATGAATTAGATTCTTTGTTAGACAATTTAGAGGAAGACTTAGGA
ATGGCGACTGAGGTCAATGATGAAGATTCTAATACTAATACTACTCATCC
TGAAGAGACATCTGTAAGTGTTGTAGTAGAATCTGCACCTCCTCAAGAGC
TTGTTTCTAATGCAGCTTTGGCTGCTACTTGCAATGAACCAGATCATGAA
TCTAGTATCAATACTGAAGCTACACCTGACGATGTTGGCGAAACTAACAA
TGATGAGATTCAAGTTACAGAAGCAACAGGAAATAATATGACATCCAATG
AAGAAACACCTTATGAATCCATTGAACCAGTATCAACAATGCAAGATGGT
CAAACAGAAGAGCTATCACCAGAATCTCTAGAAGAAACCACACCAGAATC
TGATGACCAACCTCAAGAAGGAGAAACATCAACTGAATTACGAACATCTT
TGAGAAGAAATGGTGGTACCAGTGGTTCTGGTAGACGAGTCAGATTCTCA
CTCAATCCTGAATATGAAGGAGAGAATCCAAATGCATCTGCAGGTTCACC
AAACGAGCAAGGTAAGTAGatggCAGAAGATAACGATTTTTCATTTGATC
AACCTTGGAACCCAATCAGTTATTTTGATGAAGAAGGGGATCAGGACAAT
GGTGGAGGTGGTGCCCAATATTCACCGACGCGATTGGCATCACTCTTTGA
AGCAAATGTTTCAGCGATAGATGAGGATATCCAACGATCCAAAAACATtg
tcaaatttgattttgacaGACAAGATGATCATTTAGCAGCATGCGATACA
AATGATGTTAATAATTTCACCCTGGAAACTGAAAATGGATTGAAAATGCT
TGATACCACTTCAACAATtaataaaaagtcaatttttagtgatttagaTC
GCATACGTAAATGGCAGGAACAAGCCGGTGTTGATAATCCTGATGAGGAa
cagaacgataaaaaagactTATTTTTGAGCAAATCCCCTGATCATCTTTT
CCAATCGtcagaaaacaaagaaaaatctgGGGCCAATATGGACGACGATG
TTGACATTAGTTTACTGTTAGATCCGTTTTCTAGTGTTGTTGATGATCAT
GATAAATATGAGAATCCCAACTTTGATTCAGCTAGTCGTCTTAAAGAACT
GGAAGAGCGTATGAGTGAAACTGACCATTGTACATTACCGACTGATATCC
TTGACTTGAGCTCACCAATCAATCAGACAGAGCCTAATAAGCTGATCTCG
ATAGAGTCAGgaaatgaatttgaaaataaagataCAGTAAACAAGGAAGA
TGATTTTGGTGACTTATGTGATTTATTGGAGCTGCCTGATGTGCCAACTG
TATTACCCAcctcaaaaacaaatatggtTGACAAAAAGACCACTGATGCT
CAAAACAATACCGATAAAGAAATTGATGTAAAACCATCAATAGATACTGA
TGAGACTGATATTCAAACGGATTGCACCAATACTGACCTAATTGGTGGAA
TTGATTCTTCTCATAATGGTAATAGTATTATTGGTattgataataaaaat
tttgttattgatCAAAAAGGTGATGGTCTTGTTGAAACTGTAGAGGATCT
TATCAATTCTTCTGATACAAGTGATGCTGACCAGGTACTCGAAATTGCCT
CAAACATCACCATTAAGGATAATGAGCAGACCACGGAGACTGATGAATTG
ATTAAAATAGACTTGGATGAAAATATGGTTGATGAATCTGAAGCTCCACC
TCCATATATTGACGATGATGATTTAGAAGATGAATCAGTTTCAGGGGTAG
AGCAAGATCCTTCTAGTGAAGATGTGGTTCCAAATCCTGTCAATGTTACG
GATATCAGTACCCCCAATAATACTGAAATATTAAAAGAGGTGGATCCAAA
ACAAAATGTATCTGAAATTATTAATGATAATGAAAATCAAAGTGATCCAG
AAATTTTAACCAATGTGGAGGGTGGAAACGTTGTTTTAAACATGGATAAT
ACGCCTATCAAGGATGATTCTTGCGTTGAAAATGTGACATCTGATGATAA
AACTTTTGATAAGTCTAATAATGATGTGTCGCCAACAGACAGCTCTGGCG
ATTTACCAAGCTCAGCAAGTGTAAACATTGTTTCTGTTTCTAATGCTCTT
GATTCTATGAAATGTTTAACTCCTGATGAGGATGATATAGAGGAAAGCCA
AGATATGGAGTCTTACATGGAAACTACTGTCGGAGAGCAGAATCCCTCCA
AAGCTGTCAGCAATCTTTCAACCTCGCCAATACCTGATGTCAATTTTGAA
ATCCAAGAAGATACTGGTATTAGTAATAATGTAAATATTGGTAATGTAGA
AACAGTTGACCATGCAAGGCAGGCTGGGAATCTACAATCTGCCGTAGTTG
AAACTCCAAGGCTAGAGAATATGGTATCTTTAGAACTTGAAAATGTAAAT
GATGTAGATACTGTCAATAATGATAATACTCGAAAAGATGTAATTGACAA
AAATACTAATATGGGAAATATTGATGAACTAGATATTGAAGATTCTGCTG
TTCAGGAACCATTACAGACTGTTGATACTCCTCAAGAACCTGTCGGTTTT
ACTGAACAGGCAGGAGACATTTCTGATGAATTAGATTCTTTGTTAGACAA
TTTAGAGGAAGACTTAGGAATGGCGACTGAGGTCAATGATGAAGATTCTA
ATACTAATACTACTCATCCTGAAGAGACATCTGTAAGTGTTGTAGTAGAA
TCTGCACCTCCTCAAGAGCTTGTTTCTAATGCAGCTTTGGCTGCTACTTG
CAATGAACCAGATCATGAATCTAGTATCAATACTGAAGCTACACCTGACG
ATGTTGGCGAAACTAACAATGATGAGATTCAAGTTACAGAAGCAACAGGA
AATAATATGACATCCAATGAAGAAACACCTTATGAATCCATTGAACCAGT
ATCAACAATGCAAGATGGTCAAACAGAAGAGCTATCACCAGAATCTCTAG
AAGAAACCACACCAGAATCTGATGACCAACCTCAAGAAGGAGAAACATCA
ACTGAATTACGAACATCTTTGAGAAGAAATGGTGGTACCAGTGGTTCTGG
TAGACGAGTCAGATTCTCACTCAATCCTGAATATGAAGGAGAGAATCCAA
ATGCATCTGCAGGTTCACCAAACGAGCAAGGTAAGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013641XLOC_013641Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024302-proteinTCONS_00024302-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024302-exon-sc0000487-1491911889:149926..150548TCONS_00024302-exon-sc0000487-1491911889:149926..150548Clytia hemisphaericaexon
TCONS_00024302-exon-sc0000487-1510915933:149926..150548TCONS_00024302-exon-sc0000487-1510915933:149926..150548Clytia hemisphaericaexon
TCONS_00024302-exon-sc0000487-1575043694:149926..150548TCONS_00024302-exon-sc0000487-1575043694:149926..150548Clytia hemisphaericaexon
TCONS_00024302-exon-sc0000487-1491911889:151584..154361TCONS_00024302-exon-sc0000487-1491911889:151584..154361Clytia hemisphaericaexon
TCONS_00024302-exon-sc0000487-1510915933:151584..154361TCONS_00024302-exon-sc0000487-1510915933:151584..154361Clytia hemisphaericaexon
TCONS_00024302-exon-sc0000487-1575043694:151584..154361TCONS_00024302-exon-sc0000487-1575043694:151584..154361Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000487supercontigsc0000487:149926..154361 +
Expression

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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.61403 1.46387 2.20837 2.63406 14.9849 13.4597 13.8121 19.876 12.7034 13.7607 15.1004 12.9788 11.5651 10.8454 3.17383 4.21883 4.19822 5.02303 4.01888 5.85246 5.8172 5.68636 2.22565 3.30792 11.4524 20.1935 6.24141 4.80847 5.69521 5.23767
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024302 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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