XLOC_013641 (gene) - C. hemisphaerica

Overview
NameXLOC_013641
Unique NameXLOC_013641
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000487:149926..154361+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013641 ID=XLOC_013641|Name=XLOC_013641|organism=Clytia hemisphaerica|type=gene|length=4436bp|location=Sequence derived from alignment at sc0000487:149926..154361+ (Clytia hemisphaerica)
GCaacaagatggttgtgtgcatgttgtgtaacttaaCGGTattaaactac
aaaatttatttacgcagacttgatgcaaattatgtttttcaagattttgt
gattttgcttCAAGTGCAAAGTAGGACAATGATCAGTCACATTTTTTGAC
CTAcatggaggtcctataaattaacctgtgtccgttcgtccgtccgtccg
tctgttccTCTGTTcctctgttaccaacttttcttgGGATTGAATAatag
gaattttttgatttttggtacaaagaggaggaggaggaggaggaggagga
ggaggaggAGGAGGAGCTCTCAGGCTTGTTTTAAATAATTTTAAATCAAG
TTATCAAAtgtttcacattttgtacattattcaacatttttagtctactc
tgtttcagtacatctcttacatctgttaacccacttattaaagctatcta
gctaagctctattggatgaccttccagcctcggctggtttatgtTCCTTT
GAATTATAGTGTtactttaaaaaatgtaaataaaaatggCAGAAGATAAC
GATTTTTCATTTGATCAACCTTGGAACCCAATCAGTTATTTTGATGAAGA
AGGGGATCAGGACAATGGTGGAGGTTTGTTGAtctttttaaatatatata
taaaatttacaCTTCTTGTAATCTACAAAAAGACAGCTCCAAACTTtcag
gccttactcttggtctatagacactgctataggcggccactagtaaccCC
CACTGGGAATTGCTTATTGATAGGTTGAAACAttagacaactttcacaaa
agatgtttatcaatagagatttcaaataaaagaatattaaaaatacacag
ctgattggcttaggtttctaaactctattgtttcattaaaacctcagtgc
tcatgcgatttatccggagaaattcaatattaaaaacaagagcagtgctc
atatcccgaagagtacgTTAGTTCGAGTTTTACCCTCGAAATGAAGGAAG
TTATGACGTAGCCTACACTTCTTGTGTTTCTCTGCACAATTAAGAGTGCT
CAATACTTGAGTAGAGCTTGTCACATAAAGATTGAAAAAACGGTGTATTT
CTTTTCTatactttaagttttttttcttatcaactgatgaatgcgtaTAC
ACAAAACTTGAATTATTGAGAAGAAAAACACTGTTTCTTCAGTATTTATG
TATAAAACTTACACAATGATTCAACCTGCTTTGTGCAGATCTTTGTCAGG
TCTTAAGTTATCTGACGTCAATAAAGTCAATGTAGTATATTTTCCCTGAT
ATGTGAGAGATCAAGGCAATTGTCACCCAGAGACAACATAATTTTTGCAC
ACATCAGACAGAAGATACTACCACAGTACATTGACTTTATTGACATCAGA
TAAAGTCAAGGTATTGTCTTCAACtgtttttcttatgttttaagCCTGAC
AAAGATCTGCCTTAAGCAGGTCAGAACATTGTATAAATTTAATTGTATAT
ATACAATTAAATTTATACAATGTTTTGACCTGCTTAAGGATGTATATTAA
ATTGACAGCTTTTTAACTATAGCTCTCTCCCAAAACAAACTTTCTTACTT
ATGTCTTCATTAAAGTATTTCAACttggaaaataaaattatataaattgg
TTTTTCAGGTGGTGCCCAATATTCACCGACGCGATTGGCATCACTCTTTG
AAGCAAATGTTTCAGCGATAGATGAGGATATCCAACGATCCAAAAACATt
gtcaaatttgattttgacaGACAAGATGATCATTTAGCAGCATGCGATAC
AAATGATGTTAATAATTTCACCCTGGAAACTGAAAATGGATTGAAAATGC
TTGATACCACTTCAACAATtaataaaaagtcaatttttagtgatttagaT
CGCATACGTAAATGGCAGGAACAAGCCGGTGTTGATAATCCTGATGAGGA
acagaacgataaaaaagactTATTTTTGAGCAAATCCCCTGATCATCTTT
TCCAATCGtcagaaaacaaagaaaaatctgGGGCCAATATGGACGACGAT
GTTGACATTAGTTTACTGTTAGATCCGTTTTCTAGTGTTGTTGATGATCA
TGATAAATATGAGAATCCCAACTTTGATTCAGCTAGTCGTCTTAAAGAAC
TGGAAGAGCGTATGAGTGAAACTGACCATTGTACATTACCGACTGATATC
CTTGACTTGAGCTCACCAATCAATCAGACAGAGCCTAATAAGCTGATCTC
GATAGAGTCAGgaaatgaatttgaaaataaagataCAGTAAACAAGGAAG
ATGATTTTGGTGACTTATGTGATTTATTGGAGCTGCCTGATGTGCCAACT
GTATTACCCAcctcaaaaacaaatatggtTGACAAAAAGACCACTGATGC
TCAAAACAATACCGATAAAGAAATTGATGTAAAACCATCAATAGATACTG
ATGAGACTGATATTCAAACGGATTGCACCAATACTGACCTAATTGGTGGA
ATTGATTCTTCTCATAATGGTAATAGTATTATTGGTattgataataaaaa
ttttgttattgatCAAAAAGGTGATGGTCTTGTTGAAACTGTAGAGGATC
TTATCAATTCTTCTGATACAAGTGATGCTGACCAGGTACTCGAAATTGCC
TCAAACATCACCATTAAGGATAATGAGCAGACCACGGAGACTGATGAATT
GATTAAAATAGACTTGGATGAAAATATGGTTGATGAATCTGAAGCTCCAC
CTCCATATATTGACGATGATGATTTAGAAGATGAATCAGTTTCAGGGGTA
GAGCAAGATCCTTCTAGTGAAGATGTGGTTCCAAATCCTGTCAATGTTAC
GGATATCAGTACCCCCAATAATACTGAAATATTAAAAGAGGTGGATCCAA
AACAAAATGTATCTGAAATTATTAATGATAATGAAAATCAAAGTGATCCA
GAAATTTTAACCAATGTGGAGGGTGGAAACGTTGTTTTAAACATGGATAA
TACGCCTATCAAGGATGATTCTTGCGTTGAAAATGTGACATCTGATGATA
AAACTTTTGATAAGTCTAATAATGATGTGTCGCCAACAGACAGCTCTGGC
GATTTACCAAGCTCAGCAAGTGTAAACATTGTTTCTGTTTCTAATGCTCT
TGATTCTATGAAATGTTTAACTCCTGATGAGGATGATATAGAGGAAAGCC
AAGATATGGAGTCTTACATGGAAACTACTGTCGGAGAGCAGAATCCCTCC
AAAGCTGTCAGCAATCTTTCAACCTCGCCAATACCTGATGTCAATTTTGA
AATCCAAGAAGATACTGGTATTAGTAATAATGTAAATATTGGTAATGTAG
AAACAGTTGACCATGCAAGGCAGGCTGGGAATCTACAATCTGCCGTAGTT
GAAACTCCAAGGCTAGAGAATATGGTATCTTTAGAACTTGAAAATGTAAA
TGATGTAGATACTGTCAATAATGATAATACTCGAAAAGATGTAATTGACA
AAAATACTAATATGGGAAATATTGATGAACTAGATATTGAAGATTCTGCT
GTTCAGGAACCATTACAGACTGTTGATACTCCTCAAGAACCTGTCGGTTT
TACTGAACAGGCAGGAGACATTTCTGATGAATTAGATTCTTTGTTAGACA
ATTTAGAGGAAGACTTAGGAATGGCGACTGAGGTCAATGATGAAGATTCT
AATACTAATACTACTCATCCTGAAGAGACATCTGTAAGTGTTGTAGTAGA
ATCTGCACCTCCTCAAGAGCTTGTTTCTAATGCAGCTTTGGCTGCTACTT
GCAATGAACCAGATCATGAATCTAGTATCAATACTGAAGCTACACCTGAC
GATGTTGGCGAAACTAACAATGATGAGATTCAAGTTACAGAAGCAACAGG
AAATAATATGACATCCAATGAAGAAACACCTTATGAATCCATTGAACCAG
TATCAACAATGCAAGATGGTCAAACAGAAGAGCTATCACCAGAATCTCTA
GAAGAAACCACACCAGAATCTGATGACCAACCTCAAGAAGGAGAAACATC
AACTGAATTACGAACATCTTTGAGAAGAAATGGTGGTACCAGTGGTTCTG
GTAGACGAGTCAGATTCTCACTCAATCCTGAATATGAAGGAGAGAATCCA
AATGCATCTGCAGGTTCACCAAACGAGCAAGGTAAGTAGATGCTTATTTA
CAATGAAAAACTACTCCTTTAAACTTCCTGGAAATTCTTCTCAGATCTCT
ACCTCTGAAGAAGTTCGTCCACCTCCCCTGTATGGACATAGAACGTTAAA
GGAATTATACGGTGTTATATACACCCGACTCGTCTGAAACtgatgtcagc
aaaattttaataaaagagtcctttcaaatttgtaaataaaaggaagaaaa
aaatcttgctccacatttttctttattcattacaaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00024302TCONS_00024302Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00024302-proteinTCONS_00024302-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000487supercontigsc0000487:149926..154361 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.61	1.46	2.21	2.63	14.98	13.46	13.81	19.88	12.7	13.76	15.1	12.98	11.57	10.85	3.17	4.22	4.2	5.02	4.02	5.85	5.82	5.69	2.23	3.31	11.45	20.19	6.24	4.81	5.7	5.24