TCONS_00023874 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023874
Unique NameTCONS_00023874
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2213

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023874 ID=TCONS_00023874|Name=TCONS_00023874|organism=Clytia hemisphaerica|type=transcript|length=2213bp
ataactatcattttcccTGAAGTAAattcttgatcatcgaacgtcatcac
tgtgaaaaaaattctcaaaaataatcatccagtcaaaagatatcaaacta
agttataagctgattgacgtctaaaaacgctgttttctgcagttttttgc
tgttttttggggtcaatcacttattaactTTGTATCATAACTTTATATTG
AATAAATATTTTAATGAAATTTCTTCACAttgatgatctcctaagatcaa
agaatctctccagtgaaaatgaaagttatagcacttttctacaagatctt
cattttttccttcttcattttcatcttcatttttggaattttttaaaaga
ttttttgattttaaattgttccactcgctaatatctttccaatgatacca
aatttataaagattgaagaattccttcaaaagttataggtaaaagaaaaa
agagtgcacacttatcgtgaatagactttagtggGCAGGAAGTTAACTCC
AACGAGATCATcgaaagattcacaTTAAAGATGGAATTATTCTAtccaaa
gttcaaaaatctCACATCCTTTCCAAGGAATTGCAAGGTTATCAACTCGA
AGTACAAGAGAAACTCTTTACAGATAAAGAGTATTTTGCTGGAAAGTTTG
GAAGTATATATCATTGACAAAACATTACCGATGTAATCGAGATGCTGTGA
TACACGCAATCTCATTCACATTGACACGGCTCTTGAGCGTAATGCACCAC
GAAACGCTTGCAGGACAAAACAATTACAAATATTAGCTTTGTCTAATATG
GTCATTATATTCAACGAGCTAGAGATTGCTTCGTCAATGGTTGGAAAGGC
ATTAAACCAAGCTCACGACAACTATGGGTGTCATTCAGTTGGTCGTGGAA
CACTTAAACCGAAAGCATCTCTGCTCGCCTCGTCAAATCAACTGATACCA
CACATAAAGCTGGACACACGAATCCAAATTATGACATGTGAAGAGGGGGA
AGACTTTGACAATGTCGTAGACAAAAGGGCTTTGGATAATGATTTGACAA
AATTGGTTGAATCAAATCCTGGATTTCTCATCGCCTGGTGTACCTGGCAC
AATGATATGGTTTTATAACGATGGAAAGATTTGCAGACGAAGTTGCCAAT
GAAATTATCAGTTCACGCAACGACATTAAATCACGCTTGTTAGACGCCAA
GCGCGACAACGTGATAATTGCTTTCCTGCTCCTCGCTCAGTATGAGAATG
ATAGGGACTATATTAGCCCCTCAGCTATCTACAACAAGATTGTTGGCCAT
GCCAATTCGATTGATAAAGAAAAGTTTTGGGTTGAAGTCCTGGATCTAAT
TAAATCTGATACCGAGgCAACCACTTGGTTCCATCCCTTTACAGGATTTA
AAAGAACAGATACTAAAGGGAAAGAAAGAGGTGATATAATCCCAGCAGTG
GCAATCCATTCGGACAAGATGAAATGCCTTCATTCAGTCACTTTTAAGGA
AATGGAGCTTTACTTGGGGACATATGGTAAGCACGCTCACAACGTACGCG
TGAGATTCACCAACAAAAATGTTTGCTGGCCAGATTGGAAAAAGGCAGAC
AAAAGCAACAAAAGTCGAGcatGCAAGTTTCCTTGGTCAGAAATTTCCAG
ATAGTCATTTCGCCTTCAAGTATTTTTGCGAAAAAGTATAAGGGATGTCA
TTAATTTCTATCAATTCTCTTTGCTCCTAGTTTGTGGAATTGCTGATATT
CCAGAAGCACCAGCGTCCGAAGTCCAGTCGGCATCATTAGTGACTGAATT
GTATTCAAAAGTGAAAGAATTTTATCAAGAGTATGGTCGGGATGATAATC
TCAATGAAAATGATGTACCAACAAACTCGGATACAatAACGCTGACGCCA
GATGCAAAGCAGAAGTATGAAGAAATGAATACTCCTAATAAACGTATTTA
CAAGCAgGCATACGAAGATATCAAACGAGCCAAACTGATGTTTGAGGAAT
AGTAGTAGAGAAGGGAAATTTTACTGGCTTTGAAAAacgattcttttgtt
ttgatttagtgtttttattgtttatNAAGAGAAGGGAAATTTTACTGGCT
TTGAAAacgattcttttgttttgatttagtgtttttattgtttatgtAAC
AATTTTTGTgttcaaatatttcttttttataactAAAAGACCTAAACTAA
TCTTTTATACACG
Run BLAST on NCBI

protein sequence of TCONS_00023874-protein

>TCONS_00023874-protein ID=TCONS_00023874-protein|Name=TCONS_00023874-protein|organism=Clytia hemisphaerica|type=polypeptide|length=177bp
MERFADEVANEIISSRNDIKSRLLDAKRDNVIIAFLLLAQYENDRDYISP
SAIYNKIVGHANSIDKEKFWVEVLDLIKSDTEATTWFHPFTGFKRTDTKG
KERGDIIPAVAIHSDKMKCLHSVTFKEMELYLGTYGKHAHNVRVRFTNKN
VCWPDWKKADKSNKSRACKFPWSEISR
Run BLAST on NCBI

transcript from alignment at sc0000464:25933..34097-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023874 ID=TCONS_00023874|Name=TCONS_00023874|organism=Clytia hemisphaerica|type=transcript|length=8165bp|location=Sequence derived from alignment at sc0000464:25933..34097- (Clytia hemisphaerica)
ATAACTATCATTTTCCCTGAAGTAAATTCTTGATCATCGAACGTCATCAC
TGTGAAAAAAATTCTCAAAAATAATCATCCAGTCAAAAGATATCAAACTA
AGTTATAAGCTGATTGACGTCTAAAAACGCTGTTTTCTGCAGTTTTTTGC
TGTTTTTTGGGGTCAATCACTTATTAACTTTGTATCATAACTTTATATTG
AATAAATATTTTAATGAAATTTCTTCACATTGATGATCTCCTAAGATCAA
AGAATCTCTCCAGTGAAAATGAAAGTTATAGCACTTTTCTACAAGATCTT
CATTTTTTCCTTCTTCATTTTCATCTTCATTTTTGGAATTTTTTAAAAGA
TTTTTTGATTTTAAATTGTTCCACTCGCTAATATCTTTCCAATGATACCA
AATTTATAAAGATTGAAGAATTCCTTCAAAAGTTATAGGTAAAAGAAAAA
AGAGTGCACACTTATCGTGAATAGACTTTAGTGGGCAGGAAGTTAACTCC
AACGAGATCATCGAAAGGTAATTTTTTTTTAAATCTTTAGTAAAATCCTA
TTACTGTCATTGAGGTGTTAATTCCTATCTTCCCCCTCCCCTTATAAAGA
GGGGGGTTCCAACTTTCCAACTTTATTCGAGGCATGTCAACCATACAGGG
GAACTGCAAAATCGTCAAACAGTTGGGGGAAGCAAAAAAGAAGAGGAAAC
CAAAAATTTTGAAATATGGTGGGGAAAGAGGGGGAACCAACTAATGAGGA
CACTAAGTTCTTTCTTAAATTAGAAAATATTGTAGATGGGGATGGATGAT
ATATGTAATAAACATCTTTCAGTAAATTTCCCCCTAAATCTGCCTGGACC
CCCAGGACAATTGGACAATNAATAAACATCTTTCAGTAATTTTCCCCCTA
AATCTGCCTGGACCCCAGGACAATTGGACAATTACCCCCTTGGAAAGTAC
CAGTCTATATTTTTAAAGACAATTAGATAAAGCATTGCATATTTTTGTCA
TGAAGTCTATTTTTTGCAGAACTATTGTGCTGACATGCCTGGACTTTAAA
TCTAAAGATATCTTTTGGAAATCTCTCGAAGAGGTTGAGGATATCTCAGT
TCATATATACGACGTTGTAAAAACTAATGTTATGGATAGTTTTTACAATT
ATTTGGAGTCGATGATAGATCGAAGTGAATTAAGGGAATACAGGCTTGCT
CCCTTTATTGGCTTCCAGAATGGTGTATGGGTACTTTCTGATAATGTAAT
AACAATATCCCAAGTAGGAATTTTGGTACTGAGTGTATCTCACAATTATT
TTTTTGAAGTTAACTAACTCCTTTACATTGTCTCTTTGATAAAAAAACTT
CCATACTGAGACCTCTGTGATGAAGTATGATTTTAAAAGTAGCAATATTT
CTCTCTTCACCTCTCATTTCTCCCCAAACTTTGCTGCACCTGGATTCACC
AAAATCAGCCAAAATTAAATATTTTGCTACAGCATCAAAAATAAAATTCT
TAGTAGTTTGCTAAAATAATTGCTGAAAAAGCGCAAAATATTCTTTCGCC
AAAATTACTTCCAAACCAAAAGATTTTACCATTCACTAAAATGAGTTATT
GGCAAAATAAAAGATTTCATGTCTTCAAATTATTTATTTTATAGATTCAC
ATTAAAGATGGAATTATTCTATCCAAAGTTCAAAAATCTCACATCCTTTC
CAAGGAATTGCAAGGTTATCAACTCGAAGTACAAGAGAAACTCTTTACAG
ATAAAGAGTATTTTGCTGGAAAGTTTGGAAGGTATCTTTTCTCTTTTTAT
TCAATTTACTAATACCTTTTCTGATGATTGAAGACAAAGAGATTTGTACA
AGGAAAAAAAGCAAAGTAACCATCAGGGCTTTTAGAAAATTAGTAAATTA
ATGATAAAGCCTTGCCTGAAATATTTCAAACATTATTTGTCAGGGAGATT
CCCTCAAGGTATTGTTGTCTATGAGAAAATGAACTACTTTGTCTGAAGCT
GTATCCAATTGTTATTTTTTCCTTTGTATAGTATATATCATTGACAAAAC
ATTACCGATGTAATCGAGATGCTGTGATACACGCAATCTCATTCACATTG
ACACGGCTCTTGAGCGTAATGCACCACGAAACGCTTGCAGGTATAGAAAT
ACAATCCCCTTTTCAATTGCCACTAATCTCAATCAAAACTCCATTAGTAG
AGGTCGCCATGTCTTCCAGAGTTCAGGAGTTTGTGCAAAGGGATTTTATG
ATTGACTATGTGATTGGCATTTTTTATTTTTTGATAACATCATCTTTTAA
CGACATTGGGCCTTGATATCTCCTGATACATTTATTTTCAGACATAAGTT
GTGACCTTTTTCTTTTTTGTGCTCTTTCTCACGGTACAAAAATTTTTCAA
ATTTGGCTACTTTATATTTTGGTTGCCAAAGTAACCAATGATGTCTGTTT
CCAAATGTGGATTGGGCACTTCCAGAAAAAAATTTTACATGGGGGGTGGA
GGATATATTGTCCGGGGGGGGGGGTAGCAAAAAATCATCAAAACAACTTT
GTAAGTTTGTCTTATTGAAATCTTTTAAGCAAGGAATAAAGTTATTTACT
TTTAGAAGGTATTGTAGGTAACTTTAGTACGTTGAAATTTTTGCGCAATT
ACGCAGACGCCTGAAAGTTCCTAACCTACATCTTGGGGACCATGAATAAA
GCTATCTGTTTTCAAATATAAAATGCACCATCAGACTGATGATTTTTTAT
TTCTTTTACTTAAGGACAAAACAATTACAAATATTAGCTTTGTCTAATAT
GGTCATTATATTCAACGAGCTAGAGATTGCTTCGTCAATGGTTGGAAAGG
CATTAAACCAAGCTCACGACAACTATGGGTGTCATTCAGTTGGTCGTGGA
ACACTTAAACCGAAAGCATCTCTGCTCGCCTCGTCAAATCAACTGATACC
ACACATAAAGTAATTATCTAATTTAATTTTAATTAAATACGTTCTCGAAC
AGTCTTGACTACTTTAATACAGTCATTTTACATTTTTTTACNACGTTCTC
GAAAAGTCTTGAATACTTTAATACAATCATTTTACAATAACCCTTTTGCA
TTTCCAATCACTAGAGTGATTCAATATTCTCGACTTTAGTTGAGTTAGAA
TTATGTGTATGTATGTATCTGTGTCTGTCAGTCCCCTCAAAGCTTTGGGG
CAAGCCGAAGACTTTTTTCATTTTTAGGGTGGTCACAAGTTTTAGCCCAA
ACGAGATTAAAAGCTTTGGGCCAGGCTGGAGACTATATTATGTAAAATGA
TTTTCATATTGCTAAAGTTTTCTACGTTTGATCCTTGGGTGTGAATTAAA
ATTAACTTGGCTTATATGGATTTTACAATTGGGCCTACGAATGACTTTAA
AGATACTGAAATTGTGTCAGTGCGGTTAGCAAGTTAAAGAGTAGAATAAG
TCATTGGTCAATTTTCTTTAGGCTGGACACACGAATCCAAATTATGACAT
GTGAAGAGGGGGAAGACTTTGACAATGTCGTAGACAAAAGGGCTTTGGAT
AATGATTTGACAAAATTGGTTGAATCAAATCCTGTAAGTAATCATTTTAT
TTGTTTTCGAAGGCTTTTACATAATTCTATTAGAATCACATAGAAAACAG
AGTTTATAGAAAAGAATGAGAGTATTGGTGATTTACTCTTTTGAAAATCA
TAGGTTAAGAATTATAATGGTTCACAGTGCTCAGGCGGTGTGTTTAATGA
CAACCCATGACAACACCAAAAAATATTTCATGTTTTATTCTCTTGATTTT
AGGGATTTCTCATCGCCTGGTGTACCTGGCACAATGATATGGTTTTATAA
CGATGGAAAGATTTGCAGACGAAGTTGCCAATGAAATTATCAGTTCACGC
AACGACATTAAATCACGCTTGTTAGACGCCAAGCGCGACAACGTGATAAT
TGCTTTCCTGGTTGGTGATTTTTTATTGTGCTCTTCATTCTTTTCTTTTT
TGAATCTTTGTGGAAGTCTTATGAATTAACCTATGTTTGTTAGTTATTTT
GTCCGTTCGTTAGTTTGCTCATTCGTTACCAGCTTTTCTCAAAATTGGCT
CATTCAATTTTTCAGATTTTTTGCACAAAGATGCTAATTATTAACCCTTA
AATAATACTGAGCTTGATTTCCAGAAAAAACTTTTTCAAATTTCTACAAT
AGACAAAAGACAATCAGGTACATGCTCCAGAATGCAAATCTGCGGTTTTC
TTCTTTTCAGCTCCTCGCTCAGTATGAGAATGATAGGGACTATATTAGCC
CCTCAGCTATCTACAACAAGATTGTTGGCCATGCCAATTCGATTGATAAA
GAAAAGTTTTGGGTTGAAGTCCTGGATCTAATTAAATCTGATACCGAGGT
AACTTTTAGAAACGGAAAGAAAGTCCATTCGTATTATATGTGCACTTTCA
TTTGATATTCTCAAGGTAATGAGAGAGTCTCTTGAGAGTGGTCGCCACAT
GGTATCAAATAAAGGTGCACTTTTTTAACATCAAAACTTTTCGGTAATAA
AATGTAACTAAAGTCAGTTCACGATAAGTGTGCACTCTTTTTTCTTTTAC
CTATAACTTTTGAAGGAATTCTTCAAAATTTGATATCGTTGGAGAGATAT
TTTTGACTGGAACAATTTAAAATAAAAAAGTTTTTAAAAAGATTCTAAAA
ACGAAGAGCAAAAATATGAAGATCTTGTAGAAAGCTGCTATAACTTTCAT
TTTCACTGGAGAGATTCTTTGATCTTAGGAGGTCATCACTGTGAAGAAAT
TTCATTGAAATATTTATTCAATATAAAGTTATGATACAAAGTTAATAAGT
GACTGACCCCAAAAAACAGCAGAAAACAGCGTTTTTAGACGTCAATCAGC
TTATAACTTTGTTTGATATCTTTTGAATGAATGATTGTATTTGAGAAATT
TTTTCACAGTGATGGCGTTCGATGATCAAGGATTCACTTCAGTGAAAATG
ATAGTTATACCACTTTTCTACAAGATCTTCATTTTTTTCTTCTTCATTTT
CATTTTCATTTTCAGAATTTTTTCAAAGATTTCTTTATTTCAAATTGTTC
CACTCACAAATGTCTCTCCAACGATACCAAATTTATAAAGATTGAAGAAT
TCCTTCAAAGGCCGGAAAAACAGTTGTATTGAAAATCTACTAAATATTTG
TTCATCAATTTTCACACTGATGCAAAATTGCAATGCCCAAAGAAAAGCGG
AGCCCGATTTTAGATGGTAGATGTTATAGCTTGCATGGACCGGAAATGTA
CTCAAACAGTTTTTTTTCTCAAGAAAACTGTCCCATTTCTTTTGTCTTTA
GATTTGGCCGTCCTCATAAATATTGTTTTATGTTTTCAGGCAACCACTTG
GTTCCATCCCTTTACAGGATTTAAAAGAACAGATACTAAAGGGAAAGAAA
GAGGTGATATAATCCCAGCAGTGGCAATCCATTCGGACAAGATGAAATGC
CTTCATTCAGTCACTTTTAAGGTTAGTCATTCAGATGATATATGATTTTT
TAATTGACAGGTAATTGGTCTTAAAACAGTTGTATTTCTTTGTGTCTGAG
TAAGGGAGTTGTGTTCGTTTATTTTTACATTAAAAAATCTTATTTTCCCT
TGCAGTTTAGCCTATGACATCACTCTTTTGCTCATAAAAGGTTTGCCCGG
GCCTAATCAGTCCTACTTAAAAATATCGTGAACTTACTGTTCATTGGAAT
GGACTAGGTATTAAAAATAGGTCACGGTGCTCCAGGTCTGACACCCTGCT
ATATATTTGGTGAAAAATGTTCCTTTATATCCCTTAGGAAATGGAGCTTT
ACTTGGGGACATATGGTAAGCACGCTCACAACGTACGCGTGAGATTCACC
AACAAAAATGTTTGCTGGCCAGATTGGAAAAAGGCAGACAAAAGCAACAA
AAGTCGAGGTTAAGCCCTGATTAAAAGAATTTTACTCTCAAATCACTGGA
ACAAAATAACTAATTTACGGATTTATGGAAATGAGCTTTTTGTTTTATCA
ATTATTGTGAATCGTGGAGACACGGTGGGTATTAAACTTGGGCCTCCCAG
GCGGGAGTCAAAGATCATAACCACTATACCACTACGCCTAAAAATCATCT
CCTGATCGATATGTGGTTTAACTACCATTTTCAGATCAGTGAATTTTCCA
TCTTTGGGCATTATACCACTTTGAAAAATTTCAAAAATTATCAAATCTCT
TTTGGAATTTATGATAATATACCACTCGGTTATCTTTTCAATTCAAAACT
TGTCAAAGTTGCAAAACCATATACATTTAGATACACTTAAATTTGATATT
TTCCAAAACCTGTATGGTGATGATTGATCTTAAAAGCGTAAACTAAATTG
ATTACAATTTTTTTTCAGCATGCAAGTTTCCTTGGTCAGAAATTTCCAGA
TAGTCATTTCGCCTTCAAGTATTTTTGCGAAAAAGTATAAGGGATGTCAT
TAATTTCTATCAATTCTCTTTGCTCCTAGTTTGTGGAATTGCTGATATTC
CAGAAGCACCAGCGTCCGAAGTCCAGTCGGCATCATTAGTGACTGAATTG
TATTCAAAAGTGAAAGAATTTTATCAAGAGTATGGTATGGGATTTATATT
GCGTCGACACTAAATTGATATGAGAATTATACCCTATGGTGTTTAACAAT
GCATAGACGATTGGGGTTGGGTTATACGGAACCCTTAACAAGAGTAAAGA
ATTATTCTAGAAAAGTCAATAGCGTACCAGTACCACCTCTTAGAATCTGC
ATACACTACAAGATGTTCGCAATATATTGTCAGCTCGATTTGCAATATTT
CAACAATACAGGGGGATTGTTTACAGAAAGAAAACTTTCCTTTTTATAAT
AGAGTATCAGTTGTTTACTTCGCACATTACGGTCCGCAAGCCATATTGTC
GATTATCGCCTACCTCTAAGCATGTCCATGCTCTAAGCAACTGACGGATA
TAAAGCAGATATTCAATAAGTAAAAGTTGGTTATTGAGATTTATTAACCC
GAGGCGGTGTCATATTCAACGAGGCGAAGCTTTGCTTCGTCGAATATTCA
TCAAGCTCGACTGAATATTTTTTGATATTCGAATTTTCTTGTCGATTATC
TGCTTAATATTCTCCATCAATATATTGTATAGTCTAAGTAGCCCTTTAGA
TGTAGTGTGTCCGATATAGAAGTATCGACACGAGTATATATATTTCTAAA
TAGTGATCTAAAATAAGTCATCTACGATGTAACTGTTTTGCATTTCAGGT
CGGGATGATAATCTCAATGAAAATGATGTACCAACAAACTCGGATACAGT
GAGTGTACTTTTAAAATTCTTAAACTGGGATTTTTCAAATATTTCTGTAA
CCCAGTTATAAAAGGCATCTTAAAAACTGTCCTAAACTTAAAAAAGACAA
GCTAAGTCATAAAAATCTAGTACCCGTACCTTCTCGGTTTGGTTAAAAGT
TTAGAGTACCTCTCTATTGGGATCATTTTTTGTTTTAAGATAACGCTGAC
GCCAGATGCAAAGCAGAAGTATGAAGAAATGAATACTCCTAATAAACGTA
TTTACAAGCAGGTAATTTCGATTTTTTTTTAATTTGAAAAGCTATTCAAA
TACCTGCAAGTCTAAGGTAATTTTCTGAGAAAAAAATCTGTTTAAATTTG
TCGTTACTGTTAGATCGGGCTGTTTCCGTGTATTACGCCATGAATACAGT
TGACACNATTACGGTTAGATCGGGCTGTTTCCGTGTATTACGCCATGAAA
CAGTTGACACTCACTAATTCGATCTTCAAGGGGAATTGAGGAATTTATTA
CAAATTTCTAAGGACGATTGACAGTTGATGTTGTATGAAATTTACATTGA
TATTTTTAGGCATACGAAGATATCAAACGAGCCAAACTGATGTTTGAGGA
ATAGTAGTAGAGAAGGGAAATTTTACTGGCTTTGAAAAACGATTCTTTTG
TTTTGATTTAGTGTTTTTATTGTTTATNAAGAGAAGGGAAATTTTACTGG
CTTTGAAAACGATTCTTTTGTTTTGATTTAGTGTTTTTATTGTTTATGTA
ACAATTTTTGTGTTCAAATATTTCTTTTTTATAACTAAAAGACCTAAACT
AATCTTTTATACACG

Coding sequence (CDS) from alignment at sc0000464:25933..34097-

>TCONS_00023874 ID=TCONS_00023874|Name=TCONS_00023874|organism=Clytia hemisphaerica|type=CDS|length=2670bp|location=Sequence derived from alignment at sc0000464:25933..34097- (Clytia hemisphaerica)
CATGCAAGTTTCCTTGGTCAGAAATTTCCAGATAGGAAATGGAGCTTTAC
TTGGGGACATATGGTAAGCACGCTCACAACGTACGCGTGAGATTCACCAA
CAAAAATGTTTGCTGGCCAGATTGGAAAAAGGCAGACAAAAGCAACAAAA
GTCGAGGCAACCACTTGGTTCCATCCCTTTACAGGATTTAAAAGAACAGA
TACTAAAGGGAAAGAAAGAGGTGATATAATCCCAGCAGTGGCAATCCATT
CGGACAAGATGAAATGCCTTCATTCAGTCACTTTTAAGCTCCTCGCTCAG
TATGAGAATGATAGGGACTATATTAGCCCCTCAGCTATCTACAACAAGAT
TGTTGGCCATGCCAATTCGATTGATAAAGAAAAGTTTTGGGTTGAAGTCC
TGGATCTAATTAAATCTGATACCGAGATGGAAAGATTTGCAGACGAAGTT
GCCAATGAAATTATCAGTTCACGCAACGACATTAAATCACGCTTGTTAGA
CGCCAAGCGCGACAACGTGATAATTGCTTTCCTGCATGCAAGTTTCCTTG
GTCAGAAATTTCCAGATAGGAAATGGAGCTTTACTTGGGGACATATGGTA
AGCACGCTCACAACGTACGCGTGAGATTCACCAACAAAAATGTTTGCTGG
CCAGATTGGAAAAAGGCAGACAAAAGCAACAAAAGTCGAGGCAACCACTT
GGTTCCATCCCTTTACAGGATTTAAAAGAACAGATACTAAAGGGAAAGAA
AGAGGTGATATAATCCCAGCAGTGGCAATCCATTCGGACAAGATGAAATG
CCTTCATTCAGTCACTTTTAAGCTCCTCGCTCAGTATGAGAATGATAGGG
ACTATATTAGCCCCTCAGCTATCTACAACAAGATTGTTGGCCATGCCAAT
TCGATTGATAAAGAAAAGTTTTGGGTTGAAGTCCTGGATCTAATTAAATC
TGATACCGAGATGGAAAGATTTGCAGACGAAGTTGCCAATGAAATTATCA
GTTCACGCAACGACATTAAATCACGCTTGTTAGACGCCAAGCGCGACAAC
GTGATAATTGCTTTCCTGCATGCAAGTTTCCTTGGTCAGAAATTTCCAGA
TAGGAAATGGAGCTTTACTTGGGGACATATGGTAAGCACGCTCACAACGT
ACGCGTGAGATTCACCAACAAAAATGTTTGCTGGCCAGATTGGAAAAAGG
CAGACAAAAGCAACAAAAGTCGAGGCAACCACTTGGTTCCATCCCTTTAC
AGGATTTAAAAGAACAGATACTAAAGGGAAAGAAAGAGGTGATATAATCC
CAGCAGTGGCAATCCATTCGGACAAGATGAAATGCCTTCATTCAGTCACT
TTTAAGCTCCTCGCTCAGTATGAGAATGATAGGGACTATATTAGCCCCTC
AGCTATCTACAACAAGATTGTTGGCCATGCCAATTCGATTGATAAAGAAA
AGTTTTGGGTTGAAGTCCTGGATCTAATTAAATCTGATACCGAGATGGAA
AGATTTGCAGACGAAGTTGCCAATGAAATTATCAGTTCACGCAACGACAT
TAAATCACGCTTGTTAGACGCCAAGCGCGACAACGTGATAATTGCTTTCC
TGCATGCAAGTTTCCTTGGTCAGAAATTTCCAGATAGGAAATGGAGCTTT
ACTTGGGGACATATGGTAAGCACGCTCACAACGTACGCGTGAGATTCACC
AACAAAAATGTTTGCTGGCCAGATTGGAAAAAGGCAGACAAAAGCAACAA
AAGTCGAGGCAACCACTTGGTTCCATCCCTTTACAGGATTTAAAAGAACA
GATACTAAAGGGAAAGAAAGAGGTGATATAATCCCAGCAGTGGCAATCCA
TTCGGACAAGATGAAATGCCTTCATTCAGTCACTTTTAAGCTCCTCGCTC
AGTATGAGAATGATAGGGACTATATTAGCCCCTCAGCTATCTACAACAAG
ATTGTTGGCCATGCCAATTCGATTGATAAAGAAAAGTTTTGGGTTGAAGT
CCTGGATCTAATTAAATCTGATACCGAGATGGAAAGATTTGCAGACGAAG
TTGCCAATGAAATTATCAGTTCACGCAACGACATTAAATCACGCTTGTTA
GACGCCAAGCGCGACAACGTGATAATTGCTTTCCTGCATGCAAGTTTCCT
TGGTCAGAAATTTCCAGATAGGAAATGGAGCTTTACTTGGGGACATATGG
TAAGCACGCTCACAACGTACGCGTGAGATTCACCAACAAAAATGTTTGCT
GGCCAGATTGGAAAAAGGCAGACAAAAGCAACAAAAGTCGAGGCAACCAC
TTGGTTCCATCCCTTTACAGGATTTAAAAGAACAGATACTAAAGGGAAAG
AAAGAGGTGATATAATCCCAGCAGTGGCAATCCATTCGGACAAGATGAAA
TGCCTTCATTCAGTCACTTTTAAGCTCCTCGCTCAGTATGAGAATGATAG
GGACTATATTAGCCCCTCAGCTATCTACAACAAGATTGTTGGCCATGCCA
ATTCGATTGATAAAGAAAAGTTTTGGGTTGAAGTCCTGGATCTAATTAAA
TCTGATACCGAGATGGAAAGATTTGCAGACGAAGTTGCCAATGAAATTAT
CAGTTCACGCAACGACATTAAATCACGCTTGTTAGACGCCAAGCGCGACA
ACGTGATAATTGCTTTCCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013419XLOC_013419Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023874-exon-sc0000464-1575043694:33581..34097TCONS_00023874-exon-sc0000464-1575043694:33581..34097Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1575043694:32317..32453TCONS_00023874-exon-sc0000464-1575043694:32317..32453Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1575043694:31958..32066TCONS_00023874-exon-sc0000464-1575043694:31958..32066Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1575043694:31139..31333TCONS_00023874-exon-sc0000464-1575043694:31139..31333Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1575043694:30515..30626TCONS_00023874-exon-sc0000464-1575043694:30515..30626Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1575043694:30138..30295TCONS_00023874-exon-sc0000464-1575043694:30138..30295Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1575043694:29700..29837TCONS_00023874-exon-sc0000464-1575043694:29700..29837Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1575043694:28577..28708TCONS_00023874-exon-sc0000464-1575043694:28577..28708Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1575043694:28140..28260TCONS_00023874-exon-sc0000464-1575043694:28140..28260Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1575043694:27464..27679TCONS_00023874-exon-sc0000464-1575043694:27464..27679Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1575043694:26750..26799TCONS_00023874-exon-sc0000464-1575043694:26750..26799Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1575043694:26487..26558TCONS_00023874-exon-sc0000464-1575043694:26487..26558Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1575043694:25933..26188TCONS_00023874-exon-sc0000464-1575043694:25933..26188Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1510915933:33581..34097TCONS_00023874-exon-sc0000464-1510915933:33581..34097Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1510915933:32317..32453TCONS_00023874-exon-sc0000464-1510915933:32317..32453Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1510915933:31958..32066TCONS_00023874-exon-sc0000464-1510915933:31958..32066Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1510915933:31139..31333TCONS_00023874-exon-sc0000464-1510915933:31139..31333Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1510915933:30515..30626TCONS_00023874-exon-sc0000464-1510915933:30515..30626Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1510915933:30138..30295TCONS_00023874-exon-sc0000464-1510915933:30138..30295Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1510915933:29700..29837TCONS_00023874-exon-sc0000464-1510915933:29700..29837Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1510915933:28577..28708TCONS_00023874-exon-sc0000464-1510915933:28577..28708Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1510915933:28140..28260TCONS_00023874-exon-sc0000464-1510915933:28140..28260Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1510915933:27464..27679TCONS_00023874-exon-sc0000464-1510915933:27464..27679Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1510915933:26750..26799TCONS_00023874-exon-sc0000464-1510915933:26750..26799Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1510915933:26487..26558TCONS_00023874-exon-sc0000464-1510915933:26487..26558Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1510915933:25933..26188TCONS_00023874-exon-sc0000464-1510915933:25933..26188Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1491911889:33581..34097TCONS_00023874-exon-sc0000464-1491911889:33581..34097Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1491911889:32317..32453TCONS_00023874-exon-sc0000464-1491911889:32317..32453Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1491911889:31958..32066TCONS_00023874-exon-sc0000464-1491911889:31958..32066Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1491911889:31139..31333TCONS_00023874-exon-sc0000464-1491911889:31139..31333Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1491911889:30515..30626TCONS_00023874-exon-sc0000464-1491911889:30515..30626Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1491911889:30138..30295TCONS_00023874-exon-sc0000464-1491911889:30138..30295Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1491911889:29700..29837TCONS_00023874-exon-sc0000464-1491911889:29700..29837Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1491911889:28577..28708TCONS_00023874-exon-sc0000464-1491911889:28577..28708Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1491911889:28140..28260TCONS_00023874-exon-sc0000464-1491911889:28140..28260Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1491911889:27464..27679TCONS_00023874-exon-sc0000464-1491911889:27464..27679Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1491911889:26750..26799TCONS_00023874-exon-sc0000464-1491911889:26750..26799Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1491911889:26487..26558TCONS_00023874-exon-sc0000464-1491911889:26487..26558Clytia hemisphaericaexon
TCONS_00023874-exon-sc0000464-1491911889:25933..26188TCONS_00023874-exon-sc0000464-1491911889:25933..26188Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023874-proteinTCONS_00023874-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000464supercontigsc0000464:25933..34097 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.502161	0.78491	0.151584	0.209651	1.23092	1.18186	1.69079	1.55879	1.78387	1.58706	1.43749	1.45991	1.30121	1.66457	2.79013	3.37497	2.44891	2.5934	2.24283	3.21639	3.76328	2.79958	0.791487	2.85558	0.584371	0.849328	0.880076	0.39183	0.772324	0.756971
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00023874 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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