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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023314 ID=TCONS_00023314|Name=TCONS_00023314|organism=Clytia hemisphaerica|type=transcript|length=1166bp
CTACTTTCTAAGTCAGCGTACTTTCTGAAAACGTTTCGCAATAATAGCTG
GCTCAGTTGTTTCATCTTCATGTCGGAcaaggagaagaaattttgtcacC
AAGAAATTTCAAGTGCAGTCTTTTTCGTCTCAACTTTCATCATTGTCAAT
TAGAAAGgtgaaggagcttgatGGATGACTTTTAACTACCAactggctga
atcagcagagCAGTGCGTTGGTGGTCTTTGGTGGGTGAACatgcacaaca
aagaagcagcataaaaccaaaatatacaaagcgttatgactgtatgaaca
gattgtgattgatggagaataatataaaatggtcctgctgaatataaatt
gtgccagttcATGTTTATTTCGTGCAATTGCAATGTTTACGAGACAAAAC
TCAAAGAGAGGAAAAACCTTTTAGAGGATTCGACTGACTAGAAAGCAGAC
TCAAAATGATAATTCATGGTTACTATTTTCGTCATTGAAGATTTCTTCAA
TATTTTTTCAATATAACGGAATCATTTTGATTTGGTTTGATTGATTTAAT
AGCTTGCTGGCTTTCGAGAGATTCTTGTTCATTGGAGCTTGACCAATTAC
AATAAGACAAATTTATATTTGTACGATAAAGTGATAACAAAAGCATGATT
GATGGCTTTAGCCCAAAAGACAACTTAAATGATAAAAGTACCTATGTGAC
TTTTGATGCTAGCTCGAATATATTTTCAAACAAGATCTTTCACCATAAAG
TCTTTTTAATATAATAATGTACTGgcaaatcaacttttattttcataaac
aaTTGACGTGAGATGGTAGATACTGCTTGTTATTATTACTGTGAAGTAGG
GTAACTTGCACCAGTGAAGGCTAGCATactggtagagtagagctgcatag
atcatttgttttgaaattttgctgctttggttggtcagCCATTTGATGGA
TATGCAAGTTTCcatccactgatgcaagttacccgacttcacggtatagg
ttctaatggctgaaaagctcaagatcatctttcaaactacacactatttt
cttttaaactttgaaggaaaatatatactgtaatatattttttgaattgt
tgataaatttgtctttgtaaaagttttatagagagctaaataattgtttc
aaaaacaaaaagacgg Run BLAST on NCBI transcript from alignment at sc0000450:143706..145686- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023314 ID=TCONS_00023314|Name=TCONS_00023314|organism=Clytia hemisphaerica|type=transcript|length=1981bp|location=Sequence derived from alignment at sc0000450:143706..145686- (Clytia hemisphaerica)
CTACTTTCTAAGTCAGCGTACTTTCTGAAAACGTTTCGCAATAATAGCTG
GCTCAGTTGTTTCATCTTCATGTCGGACAAGGAGAAGAAATTTTGTCACC
AAGAAATTTCAAGTGCAGTCTTTTTCGTCTCAACTTTCATCATTGTCAAT
TAGAAAGGTAAGAGTCATTGACTTATTTCAGTTATTGACTTAGTTTATAT
AATCCTAGTCATTTTCAAAAAGATAGCAGCAAGTGTGTTCAAGTGTACAC
TGATACATTTACCTCACTTGCAAGTTATCAAAAAGATAGCATTAAGCTTG
TCTGACAAGCAGCTACACCCTGAGGTGGCATGCGAGCTCCTCGCATCCTC
TTGCTTATCTTACTTAACTTACTATTACTTAACCTACAAACCTATTGAAC
TGTTGAAGCCATCCTTATTGTCACTTTTTGTTTTGAAAACATGTCAAATT
TGCCAATCGTACCACGTCTCTCAAAATTTGTTTTCTAGACTAGGCTCATT
TAATCAAACCAATGTGGAATTCTTTGGCCAAACTGCTGACACTCAATGTA
GCGTTAACTGCTTGTACGCTATCTTTTGCTCTAATTTTCGACACGTTAAT
CTTAAAGACTACTGACCTTCACAAAATCTTAATCGAAGGTGATACAGTTA
CAAACAGCTTGATACAAACTCTCATCTTTCTGTTGATGAAATGCCGCGTT
TCATTGAAATAAATGGTGTCATAACAAATTTAAATTTTTTGAATTTTGCA
AACGGCGAAGCAAACTACCTGATTAATGATTATCCTTTCCTTCGAATCCC
TTGACTTTTTTGTAAATTGGATTTCATCTCAAAACAATTTTTTTTTCTCG
GCCATGTGTTTCATGACATATGGCCATGTTTTCTTTCCACGGGCTTATTT
TTATTCGTATGGGTTGTGTGTTTATTCCATTTTAACTCTAACTATAATTA
TTTTCATCTTATCTGTCTTCAGGTGAAGGAGCTTGATGGATGACTTTTAA
CTACCAACTGGCTGAATCAGCAGAGCAGTGCGTTGGTGGTCTTTGGTGGG
TGAACATGCACAACAAAGAAGCAGCATAAAACCAAAATATACAAAGCGTT
ATGACTGTATGAACAGATTGTGATTGATGGAGAATAATATAAAATGGTCC
TGCTGAATATAAATTGTGCCAGTTCATGTTTATTTCGTGCAATTGCAATG
TTTACGAGACAAAACTCAAAGAGAGGAAAAACCTTTTAGAGGATTCGACT
GACTAGAAAGCAGACTCAAAATGATAATTCATGGTTACTATTTTCGTCAT
TGAAGATTTCTTCAATATTTTTTCAATATAACGGAATCATTTTGATTTGG
TTTGATTGATTTAATAGCTTGCTGGCTTTCGAGAGATTCTTGTTCATTGG
AGCTTGACCAATTACAATAAGACAAATTTATATTTGTACGATAAAGTGAT
AACAAAAGCATGATTGATGGCTTTAGCCCAAAAGACAACTTAAATGATAA
AAGTACCTATGTGACTTTTGATGCTAGCTCGAATATATTTTCAAACAAGA
TCTTTCACCATAAAGTCTTTTTAATATAATAATGTACTGGCAAATCAACT
TTTATTTTCATAAACAATTGACGTGAGATGGTAGATACTGCTTGTTATTA
TTACTGTGAAGTAGGGTAACTTGCACCAGTGAAGGCTAGCATACTGGTAG
AGTAGAGCTGCATAGATCATTTGTTTTGAAATTTTGCTGCTTTGGTTGGT
CAGCCATTTGATGGATATGCAAGTTTCCATCCACTGATGCAAGTTACCCG
ACTTCACGGTATAGGTTCTAATGGCTGAAAAGCTCAAGATCATCTTTCAA
ACTACACACTATTTTCTTTTAAACTTTGAAGGAAAATATATACTGTAATA
TATTTTTTGAATTGTTGATAAATTTGTCTTTGTAAAAGTTTTATAGAGAG
CTAAATAATTGTTTCAAAAACAAAAAGACGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023314-exon-sc0000450-1575043694:145530..145686 | TCONS_00023314-exon-sc0000450-1575043694:145530..145686 | Clytia hemisphaerica | exon |
| TCONS_00023314-exon-sc0000450-1575043694:143706..144714 | TCONS_00023314-exon-sc0000450-1575043694:143706..144714 | Clytia hemisphaerica | exon |
| TCONS_00023314-exon-sc0000450-1510915933:145530..145686 | TCONS_00023314-exon-sc0000450-1510915933:145530..145686 | Clytia hemisphaerica | exon |
| TCONS_00023314-exon-sc0000450-1510915933:143706..144714 | TCONS_00023314-exon-sc0000450-1510915933:143706..144714 | Clytia hemisphaerica | exon |
| TCONS_00023314-exon-sc0000450-1491911889:145530..145686 | TCONS_00023314-exon-sc0000450-1491911889:145530..145686 | Clytia hemisphaerica | exon |
| TCONS_00023314-exon-sc0000450-1491911889:143706..144714 | TCONS_00023314-exon-sc0000450-1491911889:143706..144714 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000450 | supercontig | sc0000450:143706..145686 - |
Blast
The following BLAST results are available for this feature:
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