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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023160 ID=TCONS_00023160|Name=TCONS_00023160|organism=Clytia hemisphaerica|type=transcript|length=692bp
ttgagagaaaaaatcacAGAACTGGAAAAGGAAAATGAGAAACTCGTCCT
GAAACTTGAAGAAGCAAACAAATCAAAGAAGCCTCCTTCTGGATCACCGA
AATCCGTACCGGTCGACTTTTCAAACCAAAGGGAACTTCGAGAACACCTT
AAAGAACTCAATGAAACCATCTGTTATCTACGGAACGAAAAAGTTCAACT
GAGTGCTTTCTTGACATCCAAAGACGCAAAGATCAGACATCTCCACAAAA
CTATATTACAAAGTGAGCAAGAGAAACAAGATTTGTTGCTACAACTAGAA
AACATGAAATACAATCAACGCTCGCATGACCAGCTAGATCACCAAGCGAT
TAAAACCATGAAGGATCGTATTTCTGAACTTGAATTGCAACTTGAAGAAT
CGCAATCACAAGCACAAGCTTACTTTAAAGGTGCTCTCGAAAGAAATTTA
GATGCTACACAAATTAGTAAAAAGTCGATGCCATTTCTCGAACATGGTTT
CTATATTCGACGCCACGTCCATGTGTTTGACAACCTCGTCCTCATTCTCC
TCTGATGACGTCAATCTCGGTGCCGGTATTTCGTACGGAAgctttttact
caattttgCTAAGTCTCTGTTTTCTTGATCTTTATCGTAATTTCGGGCGT
TGGCTGCGCGATAGATGACCTCTGGTTTCACTTTCCCGATGT Run BLAST on NCBI transcript from alignment at sc0000444:138044..139482+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023160 ID=TCONS_00023160|Name=TCONS_00023160|organism=Clytia hemisphaerica|type=transcript|length=1439bp|location=Sequence derived from alignment at sc0000444:138044..139482+ (Clytia hemisphaerica)
ttgagagaaaaaatcacAGAACTGGAAAAGGAAAATGAGAAACTCGTCCT
GAAACTTGAAGAAGCAAACAAATCAAAGAAGCCTCCTTCTGGATCACCGA
AATCCGTACCGGTCGACTTTTCAAACCAAAGGGAACTTCGAGAACACCTT
AAAGAACTCAATGAAACCATCTGTAAGAACTTCCCATGAAAtgtgaaaat
tgtgaaaaaattaCTGACATTTTTCGTGCCAGCTTTGATGGCTGATTATT
GATACTAGAAAAAATCATATAAAACCTTTCTGATCAGTAATAATCTACAC
TTTTTCTCAGGTGAAGTTTATATGAATTTTTTAATGGTTATAACATTTTT
CTGCAGGTTATCTACGGAACGAAAAAGTTCAACTGAGTGCTTTCTTGACA
TCCAAAGACGCAAAGATCAGACATCTCCACAAAACTATATTACAAAGTGA
GCAAGAGAAACAAGATTTGTTGCTACAACTAGAAAACATGAAATACAATC
AACGCTCGCATGACCAGCTAGATCACCAAGCGATTAAAACCATGAAGGAT
CGTATTTCTGAACTTGAATTGCAACTTGAAGAATCGCAATCACAAGCACA
AGCTTACTTTAAAGGTGCTCTCGAAAGAAATTTAGATGCTACACAAATTA
GTAAAAAGGTACAAAACATTTATTTCTCTTATAAAATATTCAAATGTAAC
TCATATCACATAATGCTTAATAATTTGCATAATTTCCCTTATACTTTCTT
TAAAAACCCTAAAGTATCAGTTGAGCTCGTTTTCCGAAATAGAAATCAAT
CAAATCACGTGACTTCTTCAAGCGTACTGAAATAATTTGCtaacaaactt
ggaaattttactcaaaaacataaaataatctGTGTGTGTTTTACACTGTT
ACATTGTTCCTTCTATCAGTTTGACCGTCTTATGAAGCCTATTAATCAAC
ACCGTTACTATAATTGGAGATAAGAACGATCTCAACGGTACTTTCAAATG
TACGTAGTCGTACTTCGTGTCCCAGTTAAATATGATGTAACATCATTAAC
TGTGATGATCTGAAGTATCTTGAGAGTATGTTGAGAACGAGAATTTCATT
GTGTTTGCAAATAGTCACATTTCTCCTCCATATAATTTCACGACGTTGAT
TCCTTGTCCGGTAAAGGGCTCAGAATGATCCTGCCTCTGGCTCTCTCCTT
TTCCTTCTTTTCTTTCTCCAGTCGATGCCATTTCTCGAACATGGTTTCTA
TATTCGACGCCACGTCCATGTGTTTGACAACCTCGTCCTCATTCTCCTCT
GATGACGTCAATCTCGGTGCCGGTATTTCGTACGGAAgctttttactcaa
ttttgCTAAGTCTCTGTTTTCTTGATCTTTATCGTAATTTCGGGCGTTGG
CTGCGCGATAGATGACCTCTGGTTTCACTTTCCCGATGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023160-exon-sc0000444-1491911889:138044..138215 | TCONS_00023160-exon-sc0000444-1491911889:138044..138215 | Clytia hemisphaerica | exon |
| TCONS_00023160-exon-sc0000444-1510915933:138044..138215 | TCONS_00023160-exon-sc0000444-1510915933:138044..138215 | Clytia hemisphaerica | exon |
| TCONS_00023160-exon-sc0000444-1575043694:138044..138215 | TCONS_00023160-exon-sc0000444-1575043694:138044..138215 | Clytia hemisphaerica | exon |
| TCONS_00023160-exon-sc0000444-1491911889:138400..138701 | TCONS_00023160-exon-sc0000444-1491911889:138400..138701 | Clytia hemisphaerica | exon |
| TCONS_00023160-exon-sc0000444-1510915933:138400..138701 | TCONS_00023160-exon-sc0000444-1510915933:138400..138701 | Clytia hemisphaerica | exon |
| TCONS_00023160-exon-sc0000444-1575043694:138400..138701 | TCONS_00023160-exon-sc0000444-1575043694:138400..138701 | Clytia hemisphaerica | exon |
| TCONS_00023160-exon-sc0000444-1491911889:139265..139482 | TCONS_00023160-exon-sc0000444-1491911889:139265..139482 | Clytia hemisphaerica | exon |
| TCONS_00023160-exon-sc0000444-1510915933:139265..139482 | TCONS_00023160-exon-sc0000444-1510915933:139265..139482 | Clytia hemisphaerica | exon |
| TCONS_00023160-exon-sc0000444-1575043694:139265..139482 | TCONS_00023160-exon-sc0000444-1575043694:139265..139482 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000444 | supercontig | sc0000444:138044..139482 + |
Blast
The following BLAST results are available for this feature:
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