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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023156 ID=TCONS_00023156|Name=TCONS_00023156|organism=Clytia hemisphaerica|type=transcript|length=2547bp
GTGAACATGAAAGAATCTTGtgcaaaaataataatagtATTGTCTGGAAA
ACGTAAATCTGGGAAAGATTATGTTGCAGATAACATAGTGAAGAAGATCT
CCCCAGAGAGATGCCATATCATGAGAGTAGCTTTACCtatcaaaaaacat
ttctgTGAGAAATACAACATGGACTATAAAGAAATGATGACCTCATCAGA
ATATAAAGAATTAAGACGAGCGGAGATGATCCAATGGGGTGAAGAACAAA
GGAATAAAGATACAGGAGTATTTTGCCGTACTGAGAAAAATTCAGCAATT
GATTCTGGGAAACCAGTTTGGATTCTAAGTGATGCACGCAGACCTAGTGA
TGTTAATTATTTTAGGGAATATGCCAGAAGCCTTGGTGTAACATTTTATG
CTATTCGTGTATCTGCAGATATAGAAACAAGAGAGGAGCGTGGTTGGAAG
TTTACAAAGAATGTTGATGATGTAGATTCTGAATGTGCCCTTGATTCTTA
TGACAAATGGGACTTTTGCtttgaaaattcacaaaatgatAGTGTTATTG
AAAAGGATATAAAGCAgcaaaatggtaaaatttgaaaattttgaaatctt
tgagAGCGAATCGAAAGGAAAGGGTCTACGTGCAATAACACATATTGATG
CTGGAGAGGAGATTTTACATGAAGAACCTCTAGTGTACACTTTGATGAAT
GCGAAATGTAGAGGAGGAAGATGTGATTATTGTTTTAGTGAAGATAGGAA
ATTATTCAAATGCTCAAAATGTAAATTTGTTTCATACTGTGGGCGTGAAT
GTCAATCTGGGGATTGGAAAATCCATAAATATGAATGTAAATGCTTGGTC
AAGGTTGCACCAAAACAACCACCTGATATCTGTCGTTTAGTATCACATCT
ATTGTTCAAATATTATACCTCAAACAAAAAGACTTCTGCCAATCCTTCAG
AGATTGAAGCCTTAACAGACAATCGTGGGAGAGTAACTAATTCACGTAAA
GAAGCATTTTTCACCTTTAGTGGTGTTTTGTTTGATTACCTCAAAGGATG
CACTTTCACTGATGATGCTGATATCTATGGATTGCTTTGTAGAATCTCAA
GCAACAGTTTCACAATCACTAATTCAGAGCTAAACTCCCTAGGGACAGGA
TTATACAAGACATCTTCTTTTCTTAACCATTCATGTGATCCCAACGTTGT
TGCAATCTTCAATGGCACCAAAATACACATCCGAACGATCAAGGAAGTGC
AAGAAGGAGAAGAGCTTTTTCTAAGCTACATCAACCTCTTAGCCACCACA
AAACATCGACAGTCTGAACTAATGGATGGGTACATGTTTACATGTAGTTG
CTCCAAATGTAATGGTAATGGGTTTTCAGACTTGATGATGTTGAGTATGA
AATGCCCACAATGCACCTGTCTGCAATCGCTTGATACACAATCAGAAAGA
TCGTGTGGATGTGACAAGAAGTGTGAAAGAAACAAATCAGCCATGTTGAA
AGCTCTCGATTGTATGGATTCTTTAGAAGCACTTTATAACTCAATTAACG
TCATCCCTACTCCAGACCAACACAAAAAGTTGGAACTGAAAATCTGTAAA
GGAAGACAGCTCTTGGGACATTGTAATATTGCATTACTACATGCTTATGA
AGTGGGTATGGACGGTTGTCTTGATTATTCGGACTGGAAAGGGGCTTTGG
AGTATGGCAAAAAGTTGGAGAAACTTTATCTCGTTTATCTGACGAAGAAC
CACCCGAGTATCGGTCTTCATTATTTTAAACAAGGAAAACTTGAGCTTCA
GATGGAAAATCTTCGTGAAGGGATCAGTTATTTTGAAAAAGCCATGAAGA
TACTTTGTATTTCACACGGAGAGAAACATGAGCTTGTGGTGTTATTACAA
GAAACTTTACAATCAGCTTTAATTGAGATAAACTGTGAACAGTTTGGTCA
CGTGGAAAATATGATGAAGATGGAAGAACAATAATTTGCTGCATGAAATT
CTGTTCCGTTTAATGATCTTGTGGAATTTTTATTATTGATTGCTGCATGT
TATGGTTCAAGATTATCACAGGAAAGATGGTAAAAAGCAGCGAGTTCCTT
TATTCTTTTGTTCATGTTTGGGAACTGGTTTCTTTTAGTTAAAAAAACAA
CCAGTGCTAGGAAGTGGCTATGGTTCCATCCTCACACTCTGGCCTGCACT
TTGAACATTTGCTGCTCGTCATCTCTTTGTATTGGGAACCAAAGACAGTC
AACAGTcaaccttttttttgaaatctttttatgACACACCTTACCTCATC
ATGCCGATTTATCAGATTTAGTTTTCATCATCATGCGGGACAAACAGTTA
GCGGCGGACATGTGTACAGCCCTGCTGAAAATGCAAATGTTAAGCAAGCA
CGGCTCTGACAGTGATGATTGTCCGATACCAACTGCTTGATGCCTCTTTT
GTTTGCATtattacttttgtttttattttatactcTTTGTACTTATGTTG
ATATTTTACTGATCGAGCAAAATAAAGAACTGTTACATACTTCTATG Run BLAST on NCBI protein sequence of TCONS_00023156-protein >TCONS_00023156-protein ID=TCONS_00023156-protein|Name=TCONS_00023156-protein|organism=Clytia hemisphaerica|type=polypeptide|length=470bp
MVKFENFEIFESESKGKGLRAITHIDAGEEILHEEPLVYTLMNAKCRGGR
CDYCFSEDRKLFKCSKCKFVSYCGRECQSGDWKIHKYECKCLVKVAPKQP
PDICRLVSHLLFKYYTSNKKTSANPSEIEALTDNRGRVTNSRKEAFFTFS
GVLFDYLKGCTFTDDADIYGLLCRISSNSFTITNSELNSLGTGLYKTSSF
LNHSCDPNVVAIFNGTKIHIRTIKEVQEGEELFLSYINLLATTKHRQSEL
MDGYMFTCSCSKCNGNGFSDLMMLSMKCPQCTCLQSLDTQSERSCGCDKK
CERNKSAMLKALDCMDSLEALYNSINVIPTPDQHKKLELKICKGRQLLGH
CNIALLHAYEVGMDGCLDYSDWKGALEYGKKLEKLYLVYLTKNHPSIGLH
YFKQGKLELQMENLREGISYFEKAMKILCISHGEKHELVVLLQETLQSAL
IEINCEQFGHVENMMKMEEQ Run BLAST on NCBI transcript from alignment at sc0000444:123460..126991+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023156 ID=TCONS_00023156|Name=TCONS_00023156|organism=Clytia hemisphaerica|type=transcript|length=3532bp|location=Sequence derived from alignment at sc0000444:123460..126991+ (Clytia hemisphaerica)
GTGAACATGAAAGAATCTTGtgcaaaaataataatagtATTGTCTGGAAA
ACGTAAATCTGGGAAAGATTATGTTGCAGATAACATAGTGAAGAAGATCT
CCCCAGAGAGATGCCATATCATGAGAGTAGCTTTACCtatcaaaaaacat
ttctgTGAGAAATACAACATGGACTATAAAGAAATGATGACCTCATCAGA
ATATAAAGAATTAAGACGAGCGGAGATGATCCAATGGGGTGAAGAACAAA
GGAATAAAGATACAGGAGTATTTTGCCGTACTGAGAAAAATTCAGCAATT
GATTCTGGGAAACCAGTTTGGATTCTAAGTGATGCACGCAGACCTAGTGA
TGTTAATTATTTTAGGGAATATGCCAGAAGCCTTGGTGTAACATTTTATG
CTATTCGTGTATCTGCAGATATAGAAACAAGAGAGGAGCGTGGTTGGAAG
TTTACAAAGAATGTTGATGATGTAGATTCTGAATGTGCCCTTGATTCTTA
TGACAAATGGGACTTTTGCtttgaaaattcacaaaatgatAGTGTTATTG
AAAAGGTTGAGGAACTCACTACCAATATGAAACAAATTCTCTCTAACTGA
GACCACACTTTCATACctttatatattttgatatatACATCACTGTTTTA
GTTTCTCGCTCCTTTCccaatttgatggagatttaatTCAATATAATGCA
GTCCaattaattttgataaattgcACAAGACTGCTCAAAATATTTATATC
ATAATATTATACTGTAGcatatttttaatgattttgtatctattttaaaa
cacttaaataatataaagataatagattttgcttgattttaattttctta
taacACACAATTTATAATATCTAATCTCTATTTTTAGGATATAAAGCAgc
aaaatggtaaaatttgaaaattttgaaatctttgagAGCGAATCGAAAGG
AAAGGGTCTACGTGCAATAACACATATTGATGCTGGAGAGGAGATTTTAC
ATGAAGAACCTCTAGTGTACACTTTGATGAATGCGAAATGTAGAGGAGGA
AGATGTGATTATTGTTTTAGTGAAGATAGGAAATTATTCAAATGCTCAAA
ATGTAAATTTGTTTCATACTGTGGGCGTGAATGTCAATCTGGGGATTGGA
AAATCCATAAATATGAATGTAAATGCTTGGTCAAGGTTGCACCAAAACAA
CCACCTGATATCTGTCGTTTAGTATCACATCTATTGTTCAAATATTATAC
CTCAAACAAAAAGACTTCTGCCAATCCTTCAGAGATTGAAGCCTTAACAG
ACAATCGTGGGAGAGTAACTAATTCACGTAAAGAAGCATTTTTCACCTTT
AGTGGTGTTTTGTTTGATTACCTCAAAGGATGCACTTTCACTGATGATGC
TGATATCTATGGATTGCTTTGTAGAATCTCAAGCAACAGTTTCACAATCA
CTAATTCAGAGCTAAACTCCCTAGGTttgttttaatcatttttttctatg
aaaaattttcaGCACCCCAAGCTTGTAGCTAAGACCATATTTTTACAGTT
CATATGTTCTAAAAAATTCTCTTATAACTTGCACTGGGCTTAAGGCACAA
AACGGAAAGTTTATATGCTGAGTTATATAatgttttcaatttgttttatt
attttctttcttaGGGACAGGATTATACAAGACATCTTCTTTTCTTAACC
ATTCATGTGATCCCAACGTTGTTGCAATCTTCAATGGCACCAAAATACAC
ATCCGAACGATCAAGGAAGTGCAAGAAGGAGAAGAGCTTTTTCTAAGCTA
CATCAACCTCTTAGCCACCACAAAACATCGACAGTCTGAACTAATGGATG
GGTACATGTTTACATGTAGTTGCTCCAAATGTAATGGTAATGGGTTTTCA
GACTTGATGATGTTGAGTATGAAATGCCCACAATGCACCTGTCTGCAATC
GCTTGATACACAATCAGGTAATGAATCTTTACGTTCTTTCTAATTTCATG
AAGTAGTTCCAAAACTAAGGGATATtgttcaatttgtttttttttaaata
gtcaGTTTCCGTTGGCAATATTTTTCAAGCTTCATGAAGGCTTTCGACTT
TGGTGCCAAtcatcatttttcaattttcgtcaTAGAAAGATCGTGTGGAT
GTGACAAGAAGTGTGAAAGAAACAAATCAGCCATGTTGAAAGCTCTCGAT
TGTATGGATTCTTTAGAAGCACTTTATAACTCAATTAACGTCATCCCTAC
TCCAGACCAACACAAAAAGTTGGAACTGAAAATCTGTAAAGGAAGACAGC
TCTTGGGACATTGTAATATTGCATTACTACATGCTTATGAAGTGGGTATG
GACGGTTGTCTTGATTATTCGGACTGGAAAGGGGCTTTGGAGTATGGCAA
AAAGTTGGAGAAACTTTATCTCGTTTATCTGACGAAGAACCACCCGAGTA
TCGGTCTTCATTATTTTAAACAAGGTATTATATTGAGCTTTCCTATTTTT
ATACAGTGTCTGGGAGATTACCAAAGTAGAGTCAATAATCACCTTTATTC
gaatttctattattcgaatttttctagtgtaattcgaactaatatATTGA
TTAATGATTAAGTcccatgaagatcgaattagagagaaagtCAACTGTAG
TCTGTTTTCTATGTTAAGTAATATGAAAAGTGATGTAACTTTGACACGTG
CCTTTCTTTTCATTAACTCGTACAGATAAGCGTTTGTTTTACTACAAATT
ATTTAATCTTTATTCTTAGGAAAACTTGAGCTTCAGATGGAAAATCTTCG
TGAAGGGATCAGTTATTTTGAAAAAGCCATGAAGATACTTTGTATTTCAC
ACGGAGAGAAACATGAGCTTGTGGTGTTATTACAAGAAACTTTACAATCA
GCTTTAATTGAGATAAACTGTGAACAGTTTGGTCACGTGGAAAATATGAT
GAAGATGGAAGAACAATAATTTGCTGCATGAAATTCTGTTCCGTTTAATG
ATCTTGTGGAATTTTTATTATTGATTGCTGCATGTTATGGTTCAAGATTA
TCACAGGAAAGATGGTAAAAAGCAGCGAGTTCCTTTATTCTTTTGTTCAT
GTTTGGGAACTGGTTTCTTTTAGTTAAAAAAACAACCAGTGCTAGGAAGT
GGCTATGGTTCCATCCTCACACTCTGGCCTGCACTTTGAACATTTGCTGC
TCGTCATCTCTTTGTATTGGGAACCAAAGACAGTCAACAGTcaacctttt
ttttgaaatctttttatgACACACCTTACCTCATCATGCCGATTTATCAG
ATTTAGTTTTCATCATCATGCGGGACAAACAGTTAGCGGCGGACATGTGT
ACAGCCCTGCTGAAAATGCAAATGTTAAGCAAGCACGGCTCTGACAGTGA
TGATTGTCCGATACCAACTGCTTGATGCCTCTTTTGTTTGCATtattact
tttgtttttattttatactcTTTGTACTTATGTTGATATTTTACTGATCG
AGCAAAATAAAGAACTGTTACATACTTCTATG Coding sequence (CDS) from alignment at sc0000444:123460..126991+ >TCONS_00023156 ID=TCONS_00023156|Name=TCONS_00023156|organism=Clytia hemisphaerica|type=CDS|length=5652bp|location=Sequence derived from alignment at sc0000444:123460..126991+ (Clytia hemisphaerica)
atggtaaaatttgaaaattttgaaatctttgagAGCGAATCGAAAGGAAA
GGGTCTACGTGCAATAACACATATTGATGCTGGAGAGGAGATTTTACATG
AAGAACCTCTAGTGTACACTTTGATGAATGCGAAATGTAGAGGAGGAAGA
TGTGATTATTGTTTTAGTGAAGATAGGAAATTATTCAAATGCTCAAAATG
TAAATTTGTTTCATACTGTGGGCGTGAATGTCAATCTGGGGATTGGAAAA
TCCATAAATATGAATGTAAATGCTTGGTCAAGGTTGCACCAAAACAACCA
CCTGATATCTGTCGTTTAGTATCACATCTATTGTTCAAATATTATACCTC
AAACAAAAAGACTTCTGCCAATCCTTCAGAGATTGAAGCCTTAACAGACA
ATCGTGGGAGAGTAACTAATTCACGTAAAGAAGCATTTTTCACCTTTAGT
GGTGTTTTGTTTGATTACCTCAAAGGATGCACTTTCACTGATGATGCTGA
TATCTATGGATTGCTTTGTAGAATCTCAAGCAACAGTTTCACAATCACTA
ATTCAGAGCTAAACTCCCTAGGGACAGGATTATACAAGACATCTTCTTTT
CTTAACCATTCATGTGATCCCAACGTTGTTGCAATCTTCAATGGCACCAA
AATACACATCCGAACGATCAAGGAAGTGCAAGAAGGAGAAGAGCTTTTTC
TAAGCTACATCAACCTCTTAGCCACCACAAAACATCGACAGTCTGAACTA
ATGGATGGGTACATGTTTACATGTAGTTGCTCCAAATGTAATGGTAATGG
GTTTTCAGACTTGATGATGTTGAGTATGAAATGCCCACAATGCACCTGTC
TGCAATCGCTTGATACACAATCAGAAAGATCGTGTGGATGTGACAAGAAG
TGTGAAAGAAACAAATCAGCCATGTTGAAAGCTCTCGATTGTATGGATTC
TTTAGAAGCACTTTATAACTCAATTAACGTCATCCCTACTCCAGACCAAC
ACAAAAAGTTGGAACTGAAAATCTGTAAAGGAAGACAGCTCTTGGGACAT
TGTAATATTGCATTACTACATGCTTATGAAGTGGGTATGGACGGTTGTCT
TGATTATTCGGACTGGAAAGGGGCTTTGGAGTATGGCAAAAAGTTGGAGA
AACTTTATCTCGTTTATCTGACGAAGAACCACCCGAGTATCGGTCTTCAT
TATTTTAAACAAGGAAAACTTGAGCTTCAGATGGAAAATCTTCGTGAAGG
GATCAGTTATTTTGAAAAAGCCATGAAGATACTTTGTATTTCACACGGAG
AGAAACATGAGCTTGTGGTGTTATTACAAGAAACTTTACAATCAGCTTTA
ATTGAGATAAACTGTGAACAGTTTGGTCACGTGGAAAATATGATGAAGAT
GGAAGAACAATAAatggtaaaatttgaaaattttgaaatctttgagAGCG
AATCGAAAGGAAAGGGTCTACGTGCAATAACACATATTGATGCTGGAGAG
GAGATTTTACATGAAGAACCTCTAGTGTACACTTTGATGAATGCGAAATG
TAGAGGAGGAAGATGTGATTATTGTTTTAGTGAAGATAGGAAATTATTCA
AATGCTCAAAATGTAAATTTGTTTCATACTGTGGGCGTGAATGTCAATCT
GGGGATTGGAAAATCCATAAATATGAATGTAAATGCTTGGTCAAGGTTGC
ACCAAAACAACCACCTGATATCTGTCGTTTAGTATCACATCTATTGTTCA
AATATTATACCTCAAACAAAAAGACTTCTGCCAATCCTTCAGAGATTGAA
GCCTTAACAGACAATCGTGGGAGAGTAACTAATTCACGTAAAGAAGCATT
TTTCACCTTTAGTGGTGTTTTGTTTGATTACCTCAAAGGATGCACTTTCA
CTGATGATGCTGATATCTATGGATTGCTTTGTAGAATCTCAAGCAACAGT
TTCACAATCACTAATTCAGAGCTAAACTCCCTAGGGACAGGATTATACAA
GACATCTTCTTTTCTTAACCATTCATGTGATCCCAACGTTGTTGCAATCT
TCAATGGCACCAAAATACACATCCGAACGATCAAGGAAGTGCAAGAAGGA
GAAGAGCTTTTTCTAAGCTACATCAACCTCTTAGCCACCACAAAACATCG
ACAGTCTGAACTAATGGATGGGTACATGTTTACATGTAGTTGCTCCAAAT
GTAATGGTAATGGGTTTTCAGACTTGATGATGTTGAGTATGAAATGCCCA
CAATGCACCTGTCTGCAATCGCTTGATACACAATCAGAAAGATCGTGTGG
ATGTGACAAGAAGTGTGAAAGAAACAAATCAGCCATGTTGAAAGCTCTCG
ATTGTATGGATTCTTTAGAAGCACTTTATAACTCAATTAACGTCATCCCT
ACTCCAGACCAACACAAAAAGTTGGAACTGAAAATCTGTAAAGGAAGACA
GCTCTTGGGACATTGTAATATTGCATTACTACATGCTTATGAAGTGGGTA
TGGACGGTTGTCTTGATTATTCGGACTGGAAAGGGGCTTTGGAGTATGGC
AAAAAGTTGGAGAAACTTTATCTCGTTTATCTGACGAAGAACCACCCGAG
TATCGGTCTTCATTATTTTAAACAAGGAAAACTTGAGCTTCAGATGGAAA
ATCTTCGTGAAGGGATCAGTTATTTTGAAAAAGCCATGAAGATACTTTGT
ATTTCACACGGAGAGAAACATGAGCTTGTGGTGTTATTACAAGAAACTTT
ACAATCAGCTTTAATTGAGATAAACTGTGAACAGTTTGGTCACGTGGAAA
ATATGATGAAGATGGAAGAACAATAAatggtaaaatttgaaaattttgaa
atctttgagAGCGAATCGAAAGGAAAGGGTCTACGTGCAATAACACATAT
TGATGCTGGAGAGGAGATTTTACATGAAGAACCTCTAGTGTACACTTTGA
TGAATGCGAAATGTAGAGGAGGAAGATGTGATTATTGTTTTAGTGAAGAT
AGGAAATTATTCAAATGCTCAAAATGTAAATTTGTTTCATACTGTGGGCG
TGAATGTCAATCTGGGGATTGGAAAATCCATAAATATGAATGTAAATGCT
TGGTCAAGGTTGCACCAAAACAACCACCTGATATCTGTCGTTTAGTATCA
CATCTATTGTTCAAATATTATACCTCAAACAAAAAGACTTCTGCCAATCC
TTCAGAGATTGAAGCCTTAACAGACAATCGTGGGAGAGTAACTAATTCAC
GTAAAGAAGCATTTTTCACCTTTAGTGGTGTTTTGTTTGATTACCTCAAA
GGATGCACTTTCACTGATGATGCTGATATCTATGGATTGCTTTGTAGAAT
CTCAAGCAACAGTTTCACAATCACTAATTCAGAGCTAAACTCCCTAGGGA
CAGGATTATACAAGACATCTTCTTTTCTTAACCATTCATGTGATCCCAAC
GTTGTTGCAATCTTCAATGGCACCAAAATACACATCCGAACGATCAAGGA
AGTGCAAGAAGGAGAAGAGCTTTTTCTAAGCTACATCAACCTCTTAGCCA
CCACAAAACATCGACAGTCTGAACTAATGGATGGGTACATGTTTACATGT
AGTTGCTCCAAATGTAATGGTAATGGGTTTTCAGACTTGATGATGTTGAG
TATGAAATGCCCACAATGCACCTGTCTGCAATCGCTTGATACACAATCAG
AAAGATCGTGTGGATGTGACAAGAAGTGTGAAAGAAACAAATCAGCCATG
TTGAAAGCTCTCGATTGTATGGATTCTTTAGAAGCACTTTATAACTCAAT
TAACGTCATCCCTACTCCAGACCAACACAAAAAGTTGGAACTGAAAATCT
GTAAAGGAAGACAGCTCTTGGGACATTGTAATATTGCATTACTACATGCT
TATGAAGTGGGTATGGACGGTTGTCTTGATTATTCGGACTGGAAAGGGGC
TTTGGAGTATGGCAAAAAGTTGGAGAAACTTTATCTCGTTTATCTGACGA
AGAACCACCCGAGTATCGGTCTTCATTATTTTAAACAAGGAAAACTTGAG
CTTCAGATGGAAAATCTTCGTGAAGGGATCAGTTATTTTGAAAAAGCCAT
GAAGATACTTTGTATTTCACACGGAGAGAAACATGAGCTTGTGGTGTTAT
TACAAGAAACTTTACAATCAGCTTTAATTGAGATAAACTGTGAACAGTTT
GGTCACGTGGAAAATATGATGAAGATGGAAGAACAATAAatggtaaaatt
tgaaaattttgaaatctttgagAGCGAATCGAAAGGAAAGGGTCTACGTG
CAATAACACATATTGATGCTGGAGAGGAGATTTTACATGAAGAACCTCTA
GTGTACACTTTGATGAATGCGAAATGTAGAGGAGGAAGATGTGATTATTG
TTTTAGTGAAGATAGGAAATTATTCAAATGCTCAAAATGTAAATTTGTTT
CATACTGTGGGCGTGAATGTCAATCTGGGGATTGGAAAATCCATAAATAT
GAATGTAAATGCTTGGTCAAGGTTGCACCAAAACAACCACCTGATATCTG
TCGTTTAGTATCACATCTATTGTTCAAATATTATACCTCAAACAAAAAGA
CTTCTGCCAATCCTTCAGAGATTGAAGCCTTAACAGACAATCGTGGGAGA
GTAACTAATTCACGTAAAGAAGCATTTTTCACCTTTAGTGGTGTTTTGTT
TGATTACCTCAAAGGATGCACTTTCACTGATGATGCTGATATCTATGGAT
TGCTTTGTAGAATCTCAAGCAACAGTTTCACAATCACTAATTCAGAGCTA
AACTCCCTAGGGACAGGATTATACAAGACATCTTCTTTTCTTAACCATTC
ATGTGATCCCAACGTTGTTGCAATCTTCAATGGCACCAAAATACACATCC
GAACGATCAAGGAAGTGCAAGAAGGAGAAGAGCTTTTTCTAAGCTACATC
AACCTCTTAGCCACCACAAAACATCGACAGTCTGAACTAATGGATGGGTA
CATGTTTACATGTAGTTGCTCCAAATGTAATGGTAATGGGTTTTCAGACT
TGATGATGTTGAGTATGAAATGCCCACAATGCACCTGTCTGCAATCGCTT
GATACACAATCAGAAAGATCGTGTGGATGTGACAAGAAGTGTGAAAGAAA
CAAATCAGCCATGTTGAAAGCTCTCGATTGTATGGATTCTTTAGAAGCAC
TTTATAACTCAATTAACGTCATCCCTACTCCAGACCAACACAAAAAGTTG
GAACTGAAAATCTGTAAAGGAAGACAGCTCTTGGGACATTGTAATATTGC
ATTACTACATGCTTATGAAGTGGGTATGGACGGTTGTCTTGATTATTCGG
ACTGGAAAGGGGCTTTGGAGTATGGCAAAAAGTTGGAGAAACTTTATCTC
GTTTATCTGACGAAGAACCACCCGAGTATCGGTCTTCATTATTTTAAACA
AGGAAAACTTGAGCTTCAGATGGAAAATCTTCGTGAAGGGATCAGTTATT
TTGAAAAAGCCATGAAGATACTTTGTATTTCACACGGAGAGAAACATGAG
CTTGTGGTGTTATTACAAGAAACTTTACAATCAGCTTTAATTGAGATAAA
CTGTGAACAGTTTGGTCACGTGGAAAATATGATGAAGATGGAAGAACAAT
AA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023156-exon-sc0000444-1491911889:123460..124014 | TCONS_00023156-exon-sc0000444-1491911889:123460..124014 | Clytia hemisphaerica | exon |
| TCONS_00023156-exon-sc0000444-1510915933:123460..124014 | TCONS_00023156-exon-sc0000444-1510915933:123460..124014 | Clytia hemisphaerica | exon |
| TCONS_00023156-exon-sc0000444-1575043694:123460..124014 | TCONS_00023156-exon-sc0000444-1575043694:123460..124014 | Clytia hemisphaerica | exon |
| TCONS_00023156-exon-sc0000444-1491911889:124347..124933 | TCONS_00023156-exon-sc0000444-1491911889:124347..124933 | Clytia hemisphaerica | exon |
| TCONS_00023156-exon-sc0000444-1510915933:124347..124933 | TCONS_00023156-exon-sc0000444-1510915933:124347..124933 | Clytia hemisphaerica | exon |
| TCONS_00023156-exon-sc0000444-1575043694:124347..124933 | TCONS_00023156-exon-sc0000444-1575043694:124347..124933 | Clytia hemisphaerica | exon |
| TCONS_00023156-exon-sc0000444-1491911889:125124..125426 | TCONS_00023156-exon-sc0000444-1491911889:125124..125426 | Clytia hemisphaerica | exon |
| TCONS_00023156-exon-sc0000444-1510915933:125124..125426 | TCONS_00023156-exon-sc0000444-1510915933:125124..125426 | Clytia hemisphaerica | exon |
| TCONS_00023156-exon-sc0000444-1575043694:125124..125426 | TCONS_00023156-exon-sc0000444-1575043694:125124..125426 | Clytia hemisphaerica | exon |
| TCONS_00023156-exon-sc0000444-1491911889:125595..125933 | TCONS_00023156-exon-sc0000444-1491911889:125595..125933 | Clytia hemisphaerica | exon |
| TCONS_00023156-exon-sc0000444-1510915933:125595..125933 | TCONS_00023156-exon-sc0000444-1510915933:125595..125933 | Clytia hemisphaerica | exon |
| TCONS_00023156-exon-sc0000444-1575043694:125595..125933 | TCONS_00023156-exon-sc0000444-1575043694:125595..125933 | Clytia hemisphaerica | exon |
| TCONS_00023156-exon-sc0000444-1491911889:126229..126991 | TCONS_00023156-exon-sc0000444-1491911889:126229..126991 | Clytia hemisphaerica | exon |
| TCONS_00023156-exon-sc0000444-1510915933:126229..126991 | TCONS_00023156-exon-sc0000444-1510915933:126229..126991 | Clytia hemisphaerica | exon |
| TCONS_00023156-exon-sc0000444-1575043694:126229..126991 | TCONS_00023156-exon-sc0000444-1575043694:126229..126991 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000444 | supercontig | sc0000444:123460..126991 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
Blast
BLAST of TCONS_00023156 vs. Swiss-Prot (Human)
Match: SMYD3 (Histone-lysine N-methyltransferase SMYD3 OS=Homo sapiens GN=SMYD3 PE=1 SV=4) HSP 1 Score: 199.904 bits (507), Expect = 5.982e-56 Identity = 129/437 (29.52%), Postives = 208/437 (47.60%), Query Frame = 2
Query: 593 EIFESESKGKGLRAITHIDAGEEILHEEPLVYTLMNAKCRGGR---CDYCFSEDRKLFKCSKCKFVSYCGRECQSGDWKIHKYECKCLVKVAPKQPPDICRLVSHLLFKYYTSNKKTSANPSEIEALTDNRGRVTNSRKEAF----FTFSGVLFDYLKGCTFTDDA-DIYGLLCRISSNSFTITNSELNSLGTGLYKTSSFLNHSCDPNVVAIFNGTKIHIRTIKEVQEGEELFLSYINLLATTKHRQSELMDGYMFTCSCSKCNGNGFSDLMMLSMKCPQCTCLQSLDTQSERSCGCDKKCERNKSAMLKALDCMDSLEALYNSINVIPTPDQHKKLELKICKGRQLLGHCNIALLHAYEVGMDGCLDYSDWXXXXXXXXXXXXXXXXXXXXNHPSIGLHYFKQGKLELQMENLREGISYFEKAMKILCISHGEKH 1879
E F + +G GLRA+T + GE + +PL YT+ C+G R CD C KL +CS+C+ YC +CQ W HK ECKCL P+ PPD RL+ ++FK S L N ++T +KE TF + + ++ + A D++ ++ NSFTI N+E+ +G GLY + S LNHSCDPN +FNG + +R +++++ GEEL + Y+++L T++ R+ +L D Y F C C +C Q+ D ++ G D++ + LK ++ L+A + V+ + I + L NI L + MD C++ + AL YG + + Y ++ +HP G+ K GKL+L + + A I+ ++HG +H
Sbjct: 7 EKFATAKRGNGLRAVTPLRPGELLFRSDPLAYTV----CKGSRGVVCDRCLLGKEKLMRCSQCRVAKYCSAKCQKKAWPDHKRECKCLKSCKPRYPPDSVRLLGRVVFKLMDGAPSESEKLYSFYDLESNINKLTEDKKEGLRQLVMTFQHFMREEIQDASQLPPAFDLFEAFAKVICNSFTICNAEMQEVGVGLYPSISLLNHSCDPNCSIVFNGPHLLLRAVRDIEVGEELTICYLDMLMTSEERRKQLRDQYCFECDCFRC---------------------QTQDKDADMLTG-DEQVWKEVQESLKKIE---ELKAHWKWEQVLAM------CQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREH 408
The following BLAST results are available for this feature:
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