TCONS_00020358 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020358
Unique NameTCONS_00020358
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length332

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020358 ID=TCONS_00020358|Name=TCONS_00020358|organism=Clytia hemisphaerica|type=transcript|length=332bp
TCCCAACTTCGAAATGGATTTGATCCATCCTTTTTTGCGGGAGATTTTAT
TTTAGTAATCGGACGTGTGGGAAAAGTCGGTGGTCAAACGCCGATGTCTT
AGTTTGTTAAACCAGGGGCACAAATTATCATACTTCAAAGTCTGGTACAT
CACATCGAGGAAATCGAAGTTGAAACTGCAAATCGATCACCAGGAAAAAT
GGCTCAAGTTGGAAAAAGATTGGCCCAAAAAGCAGTTGACTGGACTCGCC
TTGGTCAGAATATTCCTGCTGCAGCCACAGCCCAATTTAATGCATTTCGA
AACCGACATGAAACTATCAAAGGAAGGTATGA
Run BLAST on NCBI

transcript from alignment at sc0000354:248254..248585

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020358 ID=TCONS_00020358|Name=TCONS_00020358|organism=Clytia hemisphaerica|type=transcript|length=332bp|location=Sequence derived from alignment at sc0000354:248254..248585 (Clytia hemisphaerica)
TCATACCTTCCTTTGATAGTTTCATGTCGGTTTCGAAATGCATTAAATTG
GGCTGTGGCTGCAGCAGGAATATTCTGACCAAGGCGAGTCCAGTCAACTG
CTTTTTGGGCCAATCTTTTTCCAACTTGAGCCATTTTTCCTGGTGATCGA
TTTGCAGTTTCAACTTCGATTTCCTCGATGTGATGTACCAGACTTTGAAG
TATGATAATTTGTGCCCCTGGTTTAACAAACTAAGACATCGGCGTTTGAC
CACCGACTTTTCCCACACGTCCGATTACTAAAATAAAATCTCCCGCAAAA
AAGGATGGATCAAATCCATTTCGAAGTTGGGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011434XLOC_011434Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020358-exon-sc0000354-1491911889:248254..248585TCONS_00020358-exon-sc0000354-1491911889:248254..248585Clytia hemisphaericaexon
TCONS_00020358-exon-sc0000354-1510915933:248254..248585TCONS_00020358-exon-sc0000354-1510915933:248254..248585Clytia hemisphaericaexon
TCONS_00020358-exon-sc0000354-1575043694:248254..248585TCONS_00020358-exon-sc0000354-1575043694:248254..248585Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000354supercontigsc0000354:248254..248585 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
33.4846	35.6031	37.6111	78.9151	82.569	80.2515	70.3584	90.9586	27.1285	18.054	29.334	37.3986	20.7841	39.9451	25.0603	24.4038	62.0934	50.4582	15.3923	16.705	40.4791	39.6592	27.3079	28.7273	117.808	96.5907	44.4957	29.951	17.5558	14.1846
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020358 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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