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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019948 ID=TCONS_00019948|Name=TCONS_00019948|organism=Clytia hemisphaerica|type=transcript|length=183bp
ccTTAGTTAACatttaTTATGCTCTTTTTCATTCCCATCTTCAATATGGT
TGCCAACTCTGGGGTCTTACTGACAATACCACCTCTAAGCCTATATTTAT
CCTTCAAAAGAAAGCCTTACGTCTTATTACTTTTAACAACTTTCGATGCC
CTTCTTCTCCACTCTTTTCTGACTTCAAAATTC Run BLAST on NCBI transcript from alignment at sc0000339:130285..132311- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019948 ID=TCONS_00019948|Name=TCONS_00019948|organism=Clytia hemisphaerica|type=transcript|length=2027bp|location=Sequence derived from alignment at sc0000339:130285..132311- (Clytia hemisphaerica)
CCTTAGTTAACATTTGTGACTCCCCAAGCGATTTGAAGTACACAAAAGTC
CGATCGGCTAAAGCGGGTAAAAGACCGGTCTCATAGCGGGCGAAGTGAAA
TTTCAAGCGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNCCTATTTAGCGGCTTTCTTTAGGGATCTTCTCAAAGA
TATAATCGATTTTCGTTTATGAAGTTTGATTAATGATTCGACTATTTATT
CCCCTATATTCTATTATTTTTAATCTCCCATATTCGATTATTTAATCCTT
ATATTCGATTAATTAATCCTTTTTCGCTTATATCTTAGGGATCTTCTCAA
AAATATAACCGAATTTCGGTAAAATGGTTTCGGTTAAATTCGGCTGTTTA
ACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNGGTTAAATTCGGCTGTTTAACCGAATCGCTTCGGTA
AAAAGTTTAACTAATTCGGTAAAAGTAATTATTGAATTCGGCTTAAGCTT
GTGGAATTCGGTTAATAAAGTTTTACCGAATTTCGGCTATAAAGAATTTT
ACACTGCCTAGAATAATAATAGAGAATTCCACTGACTGAGACGGGGATAA
TAACAAAAGGATCGTTCGTGGTGAGACAGGGTTGTCTTGAAAATTGTTCT
TTTAACTACTTACAGATTCTGAATTTGTTTATCTAGTATTTTCGAATAGC
GAAATACTTTGCTCTCTTACATTTCTTTTCAAATCATAACAACGAACGAA
GCAGAATGCAGACTTTTACTAAATGTTTGTTTACATTGAGCTCCCTCTGC
GTGCTTTCCTTCCTGTTATCACATGAACTTTTACCAAAAATAGTGATGAA
ATTCACTCCTTCTGAGTGTGTTCTCTTTCTTTTCACGTGATTTTCACTTT
TTTTCTCTCTCGCATTCTAAAAGTTGCATCAAGCATTCGAAACGTCACAG
ATCAGGAGCTTGTGACAAATCAGGAGCTTATAAGAAAGCAAAGCCTGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTTTTTTTGTTTTGCCCTTTT
TGATTTCTGAAAAAATCTTTCTTTGTTCCAAATGTACTTGAAAATGTAAG
TAAATTAAAAAACAAAGCTAAGGGCCGCTAACGGCCGCTAGTGGCCGCTT
ATGTCCGCTAAGGGCCGCTGTTAGCGGCTTAAAACTTACTATGTGGCCGC
TTCACTGTGGCTGCTTTTAATAAGTGGCCTCGCATCGGCCTTCTTCAATA
TCCAAGCGGCCCAAAAGGTAAAAAGACCGGTCGAGTAGAGGCCAAAGAAG
ATCGGTCTTTTTACCGATCGGACTTTTATGTACTTCAAATCGCTTGGGGA
GTCACATTTATTATGCTCTTTTTCATTCCCATCTTCAATATGGTTGCCAA
CTCTGGGGTCTTACTGACAATACCACCTCTAAGCCTATATTTATCCTTCA
AAAGAAAGCCTTACGTCTTATTACTTTTAACAACTTTCGATGCCCTTCTT
CTCCACTCTTTTCTGACTTCAAAATTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019948-exon-sc0000339-1575043694:132301..132311 | TCONS_00019948-exon-sc0000339-1575043694:132301..132311 | Clytia hemisphaerica | exon |
| TCONS_00019948-exon-sc0000339-1575043694:130285..130456 | TCONS_00019948-exon-sc0000339-1575043694:130285..130456 | Clytia hemisphaerica | exon |
| TCONS_00019948-exon-sc0000339-1510915933:132301..132311 | TCONS_00019948-exon-sc0000339-1510915933:132301..132311 | Clytia hemisphaerica | exon |
| TCONS_00019948-exon-sc0000339-1510915933:130285..130456 | TCONS_00019948-exon-sc0000339-1510915933:130285..130456 | Clytia hemisphaerica | exon |
| TCONS_00019948-exon-sc0000339-1491911889:132301..132311 | TCONS_00019948-exon-sc0000339-1491911889:132301..132311 | Clytia hemisphaerica | exon |
| TCONS_00019948-exon-sc0000339-1491911889:130285..130456 | TCONS_00019948-exon-sc0000339-1491911889:130285..130456 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000339 | supercontig | sc0000339:130285..132311 - |
Blast
The following BLAST results are available for this feature:
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