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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018981 ID=TCONS_00018981|Name=TCONS_00018981|organism=Clytia hemisphaerica|type=transcript|length=931bp
ATTTTCTGGATGTTTTTTATGTTAGATATCGTATACTTCTTATATACGCC
CCGTGCGTGTATtagattttttggattttagggGGGGGGCGTTTAATAGG
AGGGGGCGTTTATCAATTAATTTATTTGAGTACAAAGATGTCATTTTAGG
GCTGTAGCAACGGGTCATAATCAGTTCGAATATAAAAAGAATACAATTTG
AATTATTGTTGTACATCTAAGCTTTTCTTCGTTTCCTTACTGCTACCTGC
TCCAACAAACGCCCCTTCCTAGGGGAGGCGTTTATTTAAGACGGtgttca
ttaaaaaatttttcttacagGAGGGGCGTTTATATTCAAAGTATGTTCAT
GTTCAAAGTAATACAGTAATTGGCATTATTTATAATTCAATATTCTTTTC
TTTAAGATTTTTACAGtttcaaatgataaaaatgaaaacattaacACTGG
TGTGCTTGTTGGTAGCAAGCATAATGCTGATGTCGCCTGATGGTGTGGAT
GGTATTTGCGTGTTCAGTGGTTGTGGAAAAAATCTGGCTCGTAAAGAAAA
CGGAGAATGGCTAGAACAATGGGAATTGGATGGATATGCATCTAAAAGTG
AATGCAGAAAACGATGCAAGTCTGGATATAAACTAAAAGTGTCTCTCGAA
TCAAGACAACTACCTATCAACAAATGAACACGTCGACTTGGTTTCATTGT
CACCAATATTTTACATATACATATAGGAATAATCTTTGTTCGTTGAAATA
GTATTGCATTTCTTATTTAACAATTTAGTAGtctaaagaaaagaaataat
actTTAAATGCAAGAAAATGAGACTTTCGTTCTTTGTTGAGATTGGACAT
TGAgtgatttttattcaaaatttgctgAACACTCAAATTGTAGCTCTTAA
GGGCATCTTTTTCTTAAGTACTTTAAGTTCT Run BLAST on NCBI transcript from alignment at sc0000314:206284..207627+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018981 ID=TCONS_00018981|Name=TCONS_00018981|organism=Clytia hemisphaerica|type=transcript|length=1344bp|location=Sequence derived from alignment at sc0000314:206284..207627+ (Clytia hemisphaerica)
ATTTTCTGGATGTTTTTTATGTTAGATATCGTATACTTCTTATATACGCC
CCGTGCGTGTATtagattttttggattttagggGGGGGGCGTTTAATAGG
AGGGGGCGTTTATCAATTAATTTATTTGAGTACAAAGATGTCATTTTAGG
GCTGTAGCAACGGGTCATAATCAGTTCGAATATAAAAAGAATACAATTTG
AATTATTGTTGTACATCTAAGCTTTTCTTCGTTTCCTTACTGCTACCTGC
TCCAACAAACGCCCCTTCCTAGGGGAGGCGTTTATTTAAGACGGtgttca
ttaaaaaatttttcttacagGAGGGGCGTTTATATTCAAAGTATGTTCAT
GTTCAAAGTAATACAGTAATTGGCATTATTTATAATTCAATATTCTTTTC
TTTAAGATTTTTACAGtttcaaatgataaaaatgaaaacattaacACTGG
TGTGCTTGTTGGTAGCAAGCATAATGCTGATGTCGCCTGATGGTGTGGAT
GGTATTTGCGTGTTCAGTGGTTGTGGAAAAAATCTGGCTCGTAAAGAAAA
CGGAGAATGGCTAGAACAATGGGAATTGGATGGATATGCATCTAAAAGTG
AATGCAGAAAACGATGCAAGTCTGGATATAAACTAAAAGTGTCTCTCGAA
TCAAGACAACTACCTATCAACAAATGAACACGTCGACTTGGTTTCATTGT
CACCAATATTTTACATATACATATAGGAATAATCTTTGTTCGTTGAAATA
GTATTGCATTTCTTATTTAACAATTTAGTAGtctaaagaaaagaaataat
actTTAAATGCAAGAAAATGAGACTTTCGTTCTTTGTTGAGATTGGACAT
tgagtagactggagtcgtttataatgcgtgtaatactaataataccaata
ttaataataatacgggatttagtttgtataaacgactggaagaatccggt
gttccagccttatagatacaggggctagctacgcagaaacttgcgtagcg
agaaaacaatttatcaagcaacaacaaactctcaaaacgaaatcaaccca
aatgaaaaacttttgacacacaaatccacacatatttttttttcccCAGA
ATTATTTTGatcaggaaaaaattataattgcaatattgacacttttcttt
tgtttggagttagtgcacaaagatttctagacgactaaaattgttccatt
cattactttttgctttatttctactatgtataaattagtcgtctagcttg
ctagactagacATTGAgtgatttttattcaaaatttgctgAACACTCAAA
TTGTAGCTCTTAAGGGCATCTTTTTCTTAAGTACTTTAAGTTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018981-exon-sc0000314-1491911889:206284..207131 | TCONS_00018981-exon-sc0000314-1491911889:206284..207131 | Clytia hemisphaerica | exon |
| TCONS_00018981-exon-sc0000314-1510915933:206284..207131 | TCONS_00018981-exon-sc0000314-1510915933:206284..207131 | Clytia hemisphaerica | exon |
| TCONS_00018981-exon-sc0000314-1575043694:206284..207131 | TCONS_00018981-exon-sc0000314-1575043694:206284..207131 | Clytia hemisphaerica | exon |
| TCONS_00018981-exon-sc0000314-1491911889:207545..207627 | TCONS_00018981-exon-sc0000314-1491911889:207545..207627 | Clytia hemisphaerica | exon |
| TCONS_00018981-exon-sc0000314-1510915933:207545..207627 | TCONS_00018981-exon-sc0000314-1510915933:207545..207627 | Clytia hemisphaerica | exon |
| TCONS_00018981-exon-sc0000314-1575043694:207545..207627 | TCONS_00018981-exon-sc0000314-1575043694:207545..207627 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000314 | supercontig | sc0000314:206284..207627 + |
Blast
The following BLAST results are available for this feature:
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