TCONS_00016429 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016429
Unique NameTCONS_00016429
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1888

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016429 ID=TCONS_00016429|Name=TCONS_00016429|organism=Clytia hemisphaerica|type=transcript|length=1888bp
TGAAAGATGACCAATATTTTGTCTGTCCAATTGGggattttcttggaaaa
tgttttGCGTACATCGAAGCACAACAAAAGGGTGGACCAGTTCTATGGGT
TCGTAGTGCATTGGCTTCCCGAACTGTATTCTGGGATATCAACGCCCTCA
TCGGATGGAGGAAACAATGACTTGGACGAGGGGTTGAATATTGTTGAAGA
CACGTTCGCAGATTCACCAGCCACCAGTTTTGGTTGGGAGAAAATAAACA
CAGAAGATGCAGAGAGCATGAAGAAACTACGTGTGGACAGCATCCAATCA
TCTTCCAGTAAACTTTCATTGAGGAGTTTGGATGACGAACCAGAAACATC
AGCTGAATCACAACTCCTCACCAAAGATCAACTCAAATATCTTGTCCGAA
GTTTACCCTCAATCACTGTGGGTCACATGATGGAACTCGTTTATAGTACG
TCTGTCCATGGCATTTCACTGAAAACGTTGTACCGTAATTTCGAAGATTT
CGACACGACAGCACTCATTGTTGTGCGTGATGAAAATCACAGGGCGTTTG
GCGCTTTTCTTTCACACCCTCCAGCCATCAGTGAGAGTTTCTATGGCACC
GGAGAATGTTTGCTTTTCTCTTTCATCACCGAGAAGAAAGTCAAGACGTA
CAAATGGTCAGGCGAAAACAGTTTCTTCATCAAAGGCTCCAAGACAAGTT
TGACTGTTGGTGGTGGACTAGGTGTATTGGGCTTATGGTTGGATGAAGAT
CTCTACCATGGTCGCACGCACGCTTGCAGTACCTTTAATAACGAACTGTT
GTCTGAAAACGAAGATTTCATTTGCACCGGTCTGGAGGCGTGGGCGTTTG
TATGAAAAGGCTTTAAGGCGTTTATCAAGATTTTTGATTGGTGCATGGAA
GGAATGGTGCCCCAAGCTTTTACCTCTGCAGAAGTAAACAATCTGTGCTA
GAGAGAGAGAAAAGGAGCCGGTGCTTCATCGACCATTGGCATCAGTTCGA
ACCTAACCGATCTTCTTGGACTCTGAGTTGTTCAACAAAATATCAGTATA
CAATAGTGAGATCAGTTGAGAGCATGGATACTTAGATTTCAAGGTTTGTT
GACCTGTCAACAGTGACTCGAAAACATCAAAGAACTGTTTTAATCTTACG
TAGATCGTTGCTTCAATCAATTTTGGAGTATCGAATGGAGTTTATTATAC
AATAATGTAAACCTACACTTTAATCTATCATTGAGTATGGCGATTTTAAA
TTCACCTCTGAAATATCGACCTTTTTGTACGTTTGTTGGCAACAACCAAA
CTGTCATGGGAGAATTCTTATCCTACTGTTATCAATAAGAAACTCTACCT
TCGTCGTGTAGAAAcaatgaattattttttgaatttttatatacATAATG
AAGTTAATATCATCATTTAGAATTTAATATATCGTAAAATAACATAACAG
ACAAATGGGAATTGATCCCtcaatttttttgtattgtAATTTAAGAGTAG
TGAATTACCAACTGAAAACGCCAGATAATACGCAAGGAACGAGGTTGGTA
TTCACAGATATCGTCCCACAATCAACTGGATGCTAGTAAAGACCTTCAGC
ATTATTCAGAAGATAGTGGGCGAACCTTTACAGTGATAACAGCAATTGAT
ACTTTGTAGTTGCAATTGATACTTTGTAGTtgtgtttttctcaaatttca
gaCAACACTTCTCAATATTCTCATAACAGACATATAGTTATCGAGGAGAT
CGTATCGTTTTTACCGTCATATACAGAGCAGAGTAATTTCGACTTATCTT
GGTCGTCgttctaatagaccttttcataaattacgtcacgaacattactc
ttaggttccaaataaacgggggtgttcgaataaacggg
Run BLAST on NCBI

transcript from alignment at sc0000237:76233..87762-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016429 ID=TCONS_00016429|Name=TCONS_00016429|organism=Clytia hemisphaerica|type=transcript|length=11530bp|location=Sequence derived from alignment at sc0000237:76233..87762- (Clytia hemisphaerica)
TGAAAGATGACCAATATTTTGTCTGTCCAATTGGGGATTTTCTTGGAAAA
TGTTTTGCGTACATCGAAGCACAACAAAAGGTAACAGAACATCAAGTGAC
CGAATTATGAAGTAAAAATTCCATCCTGCAAATTTCTCTATAATTATTTT
CACAGTCAAGGCCCGGTTGCTCAAAAATCGATAAGATTAAATCCCGATTA
GTTCTAATCGCGTTGTTGGAGCTTTTCGATTTTATTGCTGACTTCTTGAC
AAGGAATTGAAATTTTTCTTATATGATTTCTTGCAACTAACGCTCTGGTC
ATGTGGAAGATTTTGGAACGCATCAAAAAAAAAAATCTTACAAAAATAAT
TTTTTCCAACAAAATTCTGAACTACTTTCGCTCACATGTTTACTCTCTCA
AGATTTTTGTTGATCCATTTTTTCAAGAGTTTGTGTAATCACAAAAAGTC
TAAAGTAAATTTCATTCATAGTAATGCTATCGTAATGCTATCTATCTTCC
ATCATGTTGTTTTGGAAAGTATATTGGTTTGTTTTGTTCGAACGTTATAT
AAATCATCATAGTTTTATATCTTCATATGTTAGGCTGCCATATGGAAGAA
GTTTGAGTTTTTTCTATAGTCAGGCTCAAAATATTTAGGTAGCGAGGAAG
ACGCTCAATGATTATATCAATTCTTCTGATGAAGCCAGGTGTAAATCCTC
CGTCATATGTTTAATAAGGTTACGAGAATAATACTCTCGAAAAAGTCTAT
GTTCATTCGAGCCTATCGCCATGAACAGAAGACAAAAAATTAAGAAGTCT
CAAGCATCAGTCTGAGTCAAAAGACTGTCATAATTGCATATCAGAGCTTA
GAAATGATAATAGTCAGAATTGAGCAAAGGTCTGCTGGTGTTTGAAGAAA
TCGTTTAGTTTTACAGTTGACTCTCTCTAATTCGATCTTCAAGGGGGCAA
GAATATCCGATATAATTTTCAAAAATATCGGTGATCGGTTAAAAAACATT
ACCTTATATCCAGGAAATTTAAGATTCAAAAAGAATTATACCCAGGAAAC
TAAAAAGCGCAAAGTATTTCAGTGCCCTTTGAATCTAACAGTAAAGATTT
AACGACTTGCTTGAAGTTTCCTAGCTAAAGTAACCTAGCACAACAGAAAT
CTTTCTATGTATAAGGAACTCTGCGAATTCGTGTTGACATAGCGATCAAA
GGGAATAAGAAATTATGTAATCTCGGGCATACTGTGTCTTGTGATGTCAA
ACATGATTCGATCACACTGCGCAAAAAAGGTTTATTACAAATTCTCTCCA
ATTCCTTCGTAAAAACGATTCGTGAATTTGGATATAGTAGAGTTGATGTT
TAGAGTTGAAGTTGTTGGTCCGTAATTATGCTTCATCGCACTGTACACGT
TTTTTTCTATAAGAACAAACTATATAAGAACATAAGGCTTCGATGGCCAA
AATGCTAAGAACAAGTTAACAACATTTTAAGGCTTCGCGGACTCTTAAAC
ACCCAATTTCTTAAGAAAAGGGACAAAAATGGCGAAAATTAAGAACATGT
TTTAAGAACATTTTTAGGCTTAAAACTAAAAAAATTAAGAACATCCGAAG
GCTTCAGAAATTTTGGATGTTCTTACAAAAAAAACGTGTACTCTCTTTTT
AATGAGTGGGTAGTAATATACTATACTCCGGGGGGGGGGGGCAAGACAAC
CAATGGGTTTAGTTAGAGTTTAGATCGAAAACTTTGACCGAAATTTACAG
GGTGTCCGTTATTTTTATTTCCAATGGAACGGGCGAAACTATTATCTCCA
AATGTAGGGTTTGTAATGTGTGGTAATATCGAGATAGATCACTAGAAAAA
TGTAGCCATCCAGGCTACACGTGCTACTTTAAGCGTGTTATATAAGATGA
TATGAAAAAGTTTATTTTGACTGATGAAAGTAAAAAAATGAAATATTAAA
TATATCATTTAATGATGTGAGTACGCAATTCCAAAATTATACAATTACAA
AATTAGACTGTTCAAGTTTTTAGCAGAATGAGAAAGTTTTGATGACGTTG
AATGTTTTGATTTTCTAGTGTATCATCATGTTGTCTTATACACGAAACTT
TAGACTTTTGAGACCCTTTTTCGTTTCCATTAAAACGAAAGTATACGAGA
TATTATTGATATTTGAAGCTGATCGACCACCTCCTCGGTTGCAACGTGTC
GAAACAATATTCCAATTTTGATTGTTAATGGTTGTCGATTGGGGTTTGTC
GAGGGCATTTTGATGGCTTTGGACTACATAAGTTTTGAGTGCGGCGAAGG
CTTAATGAGATTTTTTGAGGAGAAGAAATTGTCTACGGCTTTATCGACTT
GCGTTTTCGTCGTTGTTGCTTCTCGGCTAGTTTATTCCCTCTATGAACGT
AATAATGCTATTTCATGATTATGAATGACCTTGTTTGTTTTTTAAAATTG
AATTTGAGGGACACCCGACTGAGTTGTTATACTAAGAAGTTGAGATGACT
CATAAGCTTACGTATTCGATATCCCCATTCGGTTTTGATTAGACAGGCTT
GATATTGAATACCATGATCTAATTTGATAAACGTTATTGCGGATGGTTCC
CTTTAGCCTTTTAGAACTTTTCCAATCCTGTTCTTCCTGTGTCACGTGAT
GGAGGTTTAGACACCGCAAATCTCAAATCTTAGTAAAGCATATTTTGATT
TCAAAGTCTTATAAACAAACTCCTGTATTTGTAAGCATTATTTTAATCAT
ATTTTGTCTGAACCGCGGTCGAACAACGATGCTGTTTAAAATGAGATAAT
TCTTCTACAAATTCACGATGACCCTGAAGGCTGCCAGGGCTAGAAATATC
ACCAAAAGGTTTGCTTTTTGCTGCCGGATCGCCATGTTTTTTATCCGTTT
TATCCACCAAAATGAAGAGTTAGCTTTGTTACATAACAAATCAAGTCATA
TAAGATTCTCTACTCATTACCAAGCAACGGCAATGATGACGTCATCGCTT
AGCAACGATGATAATGTCATCACGTGATAACAAAATTTGCCAAGGAAGCA
ATAAATCTGTCTGATGTGGCGTGAGATGAGTTTTCTTGATAAATGAGATT
TAGAAAGTAGCTACTTATTTCGTATTTTATACTAGTAGTATTCATTCTAT
GATTGCTGGTTTAGTTAGTTCTTTTTTGTGTCAAGATATTAATATGCTTG
TTTGGATAGAACTTTTTTAGTTTATCGTGTTTTGGTTTGTTTACAGTATT
TACAAACTGGGTTGTGGTTTCCCCACTCAAAATATGGTTTTTGTTTATGT
TCTTAATTTTGTTTCTCTAATACTAAACAATGGAAAAGAGAAAAATGATT
ACCCCGGCGCCTGAAACCAGGGATTCCTGCTTCCTCTAAATGTTCCGTTT
AGCTCATGGATAAGTGGACCTGCTGACCGTGGACCCCGTGAAAACAATCA
GTAGACTGTCTAAAAGTTTAATATTTCTGGGCTATCCACCGTAAAATATC
GATTCTATCGATCGTCTATCTAAATTTCAATGAGAGGGTTTCGCTTCAAT
AATTATCAAGAAGTGTTTGAATACAGCCTTTATGTTAAAGGATAGATTTT
TGCACACTGTATTTATACACTATACACCACGTTCATTTTCTCTTGGTCAG
TAATGTTCACAAAACACTACACTCACAAAGAAAATAACATACTGAACAAA
ATAAAACCAAAACTTCATCAAAACCTTTTTTTTTGAAATCGAATGATGGA
TGAAGCGAAGCAATTACGGAAAAGGTAGATATAGGATTTCCTTCGTTGTT
TCGACGTTCATCTAACGTCCACACCAGCTTGAGGGTTTGTTCTAAGTACT
TCAACCCCCCCCCCCACCAAAGTTTCCTTCAAGATGTATACTATCAATCC
ATTTATCTAGGGAGAACCATTATCGTTAACAGAAATAAATGTTTAATACT
GAATGCTTTTCTGTTATTTCTCGACTTGTTTTTGTTTTTTTGTTTTGAGA
ACTGTATGAAGAGTAGTGTTTGTTGTCTCACAGCCCGGTGAAACTTTTTT
CCTCATTGGGGATAAAAATTCCTAGAAATTCTATTTTTCAAAGGTTAAAA
AATCCAGTGGGGATGGTTTTGGTGTGCAATTTTTAAACATTTGATTTCGA
GTGGGGGTGAAATATAAGTCAATTTCCCAGTAAGGCAAAAATTGTAGGGT
ATTTTCCTACGAGGGACTAAATTTTTGCCAGATTTTCCAGTGGGGCTGGG
GTCCCAACGGGTCTGTGACACAGGGGTATGATAACGATTAAAACCAATAA
CGACAATCCTCCAGAATCGAAAAACTATGGCGTGCTCTTAAAAATGCACC
CATATTTCTGCATTTCACTCTCACTAATTCAAACCCAAGGGAAATATAAG
GTGTTCGAATTTAAGAATATTGGAAAATATTTGATGAGGGTTCCTCCTTT
GACAGTTAGTTCAAATCATAACATGATTCGATTTCATGATATTCATGACG
TAATGTTTTCTACGGAAAGACAATACAATTAATACAACTTTTGTCTAGTT
TTAATTTGCCACTACTGGCTAAAACCGGGGTATTTGCGTAGAAAACATTA
CGCCATGAATATCATGAATAATAAAAATTTGAATTATTTCACTGTAATGA
AATCAACCAACTCTTTCGTACATTTTATACAATTAACTCTTTTCAATTTT
GTATTCACAGGGTGGACCAGTTCTATGGGTTCGTAGTGCATTGGCTTCCC
GAACTGTATTCTGGGATATCAACGCCCTCATCGGATGGAGGAAACAATGA
CTTGGACGAGGTACAGAAAATGATTTTTGAATCTAATCTTATCGCAGCCA
CTAAAGGAGATCTTCATATTTTGGACATACCGTCTTATACGCTGAAAATA
TTTCAAAGAGTGATCCTCAAAGGGATAATCAGATGGTTAGAGATATATTG
CCTGAACAAACCCTATGTGGTTTTGAGTAAGACCTCCAAGTATGTTTGGG
TAATTATTTTCCAAAGAAATATCACAATTTGAAATTTCTGAAAATGGGTT
TTCACACGGTTGTTAAGTTGAAATTCTATTGTTTTCTTACTAAAAGTCAA
AAACTTGTATTTTAAATATCTCGACTTTGGAAAATATTTAGGTAAAAATA
TTTTGAGGATTTACTCAGGACAATAGAAAGATTACACATGCCAAATATCT
CAAACCATCTGATTATCCCTTTAAATTTTTTCATCGTGGTGATCTCTACT
GTAAATACTCGGTAGCGTTCTATCCCCTTCCATTTAAATTTTTCAGGCTA
ATTGAATTTTATACTTACTGGTAAATTTGCTTTATCAGAGCTTTTACTTG
CAAATCTTTCCAATCAAAAAGTACTGCCATTTCAGATGAATTTCCACAAT
CACTAAGCTAACAATTATAACTGTCCGTCTTTTCTCAGTGAGTTTGTGTA
AAATCGATGATGGGGGTGTCTTTTTGTGTATTTTGTAGAAAATACATTGT
ATATGAGCTTAATATGCCTCCTTTTTTCACAGGGGTTGAATATTGTTGAA
GACACGTTCGCAGATTCACCAGCCACCAGTTTTGGTTGGGAGGTATGTCC
GCCATTTTTGTTTGTTCCTTTTTGTTAGTTATAGTGAAATTCAAAGAAGA
CTTTTTTTTTCCAAAGATATTTGAAGATGAATATTTGTTTTGAATTAGAT
GGTTATTTCTTAGTTAGCTATTTCTATTTGGCGTAATAAGGGTGCCAAAT
TCGGTTTGATGGGGCGATGGGGGTACAAAAACTCGGTTTGATGGCGCGAT
GAGGGTGCAATATAATAACATATTATCCTAACCATAGGATGGTGTTTATA
AGGTTATAAAGTGTAATAAAAAATTTCACTTTTTCACTATTCATTCGAGA
TATTCATTTGAGAGAGTTGTTTTTTTCTTGTGAATATTTATTATTAAGTT
TTAGAAGATAGAGTAGCACGAACAGTCTTTTGATGTGTAGTGTAGTATCA
AGTGTTTTCATAGAAAAATAGACAATGCGAGATATTCGTTAACTTGTTTC
AAGCTCTAAATGCGAGATATTCGTTAACTTGTTTCAAGCTCTACGGAATG
GGAACAAGCTGGAGTTTTTACAAGCTCTTATTTGATTTGGTTGGCCGTTA
AGATGTTAAGAATTTTGGTTGGCCGTTAAGAATCTTATTGCTTTTTCTAA
AGAACGCGTCATCTCTATCACTTTAAATGACCAATTAGTGAAGTATCTTG
TAAAAACTCCAGCTCATCCCACGGAATGCCGACGGACAAAATGACGCGAA
CGACGCGAAGCGTAGATCTCATCAGCACATCAACCCAGTCTATTTTCCAT
ATTTTTGAAAGCAATTTTCCATTTTCCGCCGGTTATCCCGGGGAAAAGCA
ACGCCAAGCCGCGAGTGGAAACTCAAACGGGATATGTAGCGAAACTTGTT
GTTTCTAATGAAGTGATCAGTATAATCCATGTAGTTAGTGATAATTGCTC
CGTAACCAACCATTAACCAGTCTGTCGATAAAAACTTAATTAAATTACCA
TGAGGATAACATGCGTCATTCTCAGACACAGTATATGAGAAATAAAAACT
GATCTTAGTGAAGTTTAGCCACACGTTTTTTTTTGTGAGAACAAACTATA
TAAGAACACAAGGTTTCGATGGCCGTATTGTTAAGAGCATTTTAAGGCTT
TTTAGACCCTAAAACACCCAATTTCTTAGGAAAATGGACAAAAATACTTA
AAAGATGGTGAAAATAAGAACATGTTAAGAACAATGTTAGACTTAAAACT
CAAAAAGTTAAGAACATCCGAAGTCTTCAAAATTTTTGGATGTTCTTATA
AAAAAAGTGTACTTAGTTTACATCAAAGTCTGAAATGAATTCAATTCTTG
TTTTCATTGTTTTTCGCTCTTGTAGTTTTATTTGTATATGTTAGTAGCGG
GCTTGATTCCTGTAATGGGGGTTTTGTGTTCGAATCCCGTACAAATTAGC
CTGGGGGCCACTTAAAGCTTTTCTGGACAACGTTGATAAGAAATCGGTCG
TAATATGACTTTAATTTTTGGCTTTGCATGAACTCGCAGTAATTCAATAC
CACTAGATCCAGTTTTTTGAAAACGAAAGTGAAACAATGCCAAGATGTTG
GAATCTTCTAGTCTACTTCACTTTACTCAGCCCCATAAAAATTATCAGAA
AGCAAAATTCAGTTAGAAGTAAACACTTATCAACATTCAAATCAACAATT
ATTGCCCTTACCTAGGTTACGGCCCGCCCGGATCACATAATTATTTCAGA
CTCTATCGTTAGTATCGTATACTACGTACGTAGGGAGTGAATTCGAAGCT
TAAAATAAAATTGTTTAAAAAAGAATGTCAACTAATTGTAACCTCATTGT
AGATTTCCATAACTTCAAATGCTGAAATCATCATTTTCTCACCTTGTTAC
CATAGAAAATAAACACAGAAGATGCAGAGAGCATGAAGAAACTACGTGTG
GACAGCATCCAATCATCTTCCAGTAAACTTTCATTGAGGAGTTTGGATGA
CGAACCAGAAACATCAGCTGAATCACAACTCCTCACCAAAGATCAACTCA
AATATGTAAGAATTTTTACCTTATAAGGGAAAAATGTCGGGGGGGGGGCA
CGAAAGTTTGAAAGGATAAGGAATTTTCCCCGACTAATTAAAAAACTTAA
ACGTTATTTTCCCGATAATGTATGACGTTCTTATGTTACAAGCCTAGCAT
TGACGTCAATTTCTAGGGGGCTAAAAATATTTAATAAAAGAAGGCATCCC
ATTTTGCAGTCAAAATGATCAAAGTCCGAAAATTTAGAACGCCATGAGAC
TATTTAACTGTTTTTTTTTTCTTTGACAAAATTCCAACATGTTTGGTACT
CTTTTTTGTCTAATTGAGCCCCTATAAAAAATCAACCCAATATAATATTT
CGAAATTCATAGGCGTAGAATGATAAGTTCCTTGGATAAATGTGGGATTA
GGTTGCAGAGTAGGTTATCATTTTGCCTGTACCAGGACCGCGGCTTTTTC
CTCAACACCGTCCCGTCTGTAACTTTTTACAATTATTTTCCCAGAGATTC
GTGGGGGAATAAAAATTCTTGGCTTCAAGCAAAAGAAACGTGAAGGAATA
ACTTTGGGATTAATATCTTTTATTTCTATATTTCATCAAGGATTCTAACG
ACGTTATAAATCCAAATCGCGTGTTCGGATAGAGATGAGAGAAGCTAGTT
ATCATTCTCGTTGTATAAAATCTTTCTTCTCTTCTTCCACAGCTTGTCCG
AAGTTTACCCTCAATCACTGTGGGTCACATGATGGAACTCGTTTATAGTA
CGTCTGTCCATGGCATTTCACTGAAAACGTTGTACCGTAATTTCGAAGAT
TTCGACACGACAGCACTCATTGTTGTGCGTGATGAAAATCACAGGGTATG
TTCGTTTTATATAACTTTGTAGAGAGGGATTGGGTTCTAGTTTACTAAGA
TCGTAGAACGATCGCTTTTAATTTGAACACGCACGGGTAACACAAATTTG
TTCGAGTTATGAGTATTTCAAGATGTGTGGCATTGTTATTTGACCAATAG
ACCATGAAAATTGTTCGAGTTAAGGAGAGCTATATTCGAGCTATAGAGGT
TCGAGTTAAGGAGAGCTATATTCGAGCTGTATAGGTTCGAGTTAAAGCAA
AACCACTGTACGTATTGGTGCATCGGTGTCATAACTCTTGACATTTTTGA
CCCTAATAAAGTTACCCTTGATAATTACATTTCATCGGGTCATCGATCGG
ATCCTTTTGAATTTGAATACGGTTGAACTTCAGCAGTATTACTAACCTGA
CCTTAGAACTGGAATGAAAATTTTACTTTAGATAGCTTTGACCACTTTAC
GTATTCTTACTTTTTCCCAATTTCAGGCGTTTGGCGCTTTTCTTTCACAC
CCTCCAGCCATCAGTGAGAGTTTCTATGGCACCGGAGAATGTTTGCTTTT
CTCTTTCATCACCGAGAAGAAAGTCAAGGTAGGCTATATGTTTTGTTTTC
TCATGAAACTGTAAGAGTATTTTCAAAGTTTTGAGGTTACTAGAATCCTC
TTTCTGAGCTAAATGAATGGTCGATATTTTTGCGTGGAAAGCCCAATAAT
TTTAAGAGTTTGAGCAGATTCTTTGATAGTTTCCCAGTCCGAGGCAAGCT
TAAGGTTCCCTTAAAGATTTCGTAAATTGCGTCACGAGCAACGCTTGCCT
CGTTTTCAAATATTGCTATGGTAACCGACTCCCAGAGGAGTTCATAAGAT
GGACTACTATTTCTAACAGTAACACTTGACGACATGACATAATCAACTTG
GCAATGGTTTCAAAACGAGGCATTTGTTGTCCTCAAAATAATTTATGAAA
ATGCCTAGCTGTTAACAAAACAGAACAGACTCAAGTTTCTAAAATTCTTT
GTTGTTTTTAACTTAAATCTGAGTTCTCGTGAAAAGAATTAATTTCAAAC
TTCATTCTCATTTTTTTCTTCGCTTNACTTAAATCTGAGTTATCATGAAA
ATAATTAATTTCAAACTTCATTCTCATTTTTTTCTCGCCTTTTCAGACGT
ACAAATGGTCAGGCGAAAACAGTTTCTTCATCAAAGGCTCCAAGACAAGT
TTGACTGTTGGTGGTGGACTGTGAGTTATTCTCATTTCTAAATATTATAT
ATTCTTTCCAATTGTGTAGCTCGTTAGGTTAAGAACTTAGATATATATCA
CTAATTCCCACAACGCTTAGAGTTTATTGTCTTGTATACTGCAGTGGAAA
AAAAGCGTTTTTTTTACAGTCGTATATCATTTTTTTCGGACATACTGTAT
GCACCACTGGTCTCTAACTACTTGACTTGATTGAGCTTCCCCTACAAAAG
GAAGTGTGTCCAGTTAAAGAGCTGACTAGAAAGTAGACATTGAATGTTTT
GAAATACGAACGCTCGAAAAACAACATGGCGGACTAGTCGGCCATGAAAC
TGGACATTCTTCCACGGGAAAGCCTATCTACAATCAGTTTTTGGCTAATT
TACCATTTTTCGAAAATTGAAGTTCGAGCGAGAATGTCAATTTTTAGGCC
TTCAACTTGATTTCATCGATTATTTCGATATGGGAGGGATTTATTGGTTT
CAAGGCTATTTAAGTCTAGCGTTAAAACTCAGTGTTAAAACTCTACCCTT
CGAACCTACTTTAGAGCACTTACAAATCGATTGTGGTTTCAAAACACCCC
GGTGAATTTCCCTTTTGCGCCAAGTATTTTGTCACTGATTGTAGTATGTA
AAGTATTATATCTGTGATACGTACTCACTCACTAAACTTATCTTCACATT
CTAACTTTCAGAGGTGTATTGGGCTTATGGTTGGATGAAGATCTCTACCA
TGGTCGCACGCACGCTTGCAGTACCTTTAATAACGAACTGTTGTCTGAAA
ACGAAGATTTCATTTGCACCGGTCTGGAGGCGTGGGCGTTTGTATGAAAA
GGCTTTAAGGCGTTTATCAAGATTTTTGATTGGTGCATGGAAGGAATGGT
GCCCCAAGCTTTTACCTCTGCAGAAGTAAACAATCTGTGCTAGAGAGAGA
GAAAAGGAGCCGGTGCTTCATCGACCATTGGCATCAGTTCGAACCTAACC
GATCTTCTTGGACTCTGAGTTGTTCAACAAAATATCAGTATACAATAGTG
AGATCAGTTGAGAGCATGGATACTTAGATTTCAAGGTTTGTTGACCTGTC
AACAGTGACTCGAAAACATCAAAGAACTGTTTTAATCTTACGTAGATCGT
TGCTTCAATCAATTTTGGAGTATCGAATGGAGTTTATTATACAATAATGT
AAACCTACACTTTAATCTATCATTGAGTATGGCGATTTTAAATTCACCTC
TGAAATATCGACCTTTTTGTACGTTTGTTGGCAACAACCAAACTGTCATG
GGAGAATTCTTATCCTACTGTTATCAATAAGAAACTCTACCTTCGTCGTG
TAGAAACAATGAATTATTTTTTGAATTTTTATATACATAATGAAGTTAAT
ATCATCATTTAGAATTTAATATATCGTAAAATAACATAACAGACAAATGG
GAATTGATCCCTCAATTTTTTTGTATTGTAATTTAAGAGTAGTGAATTAC
CAACTGAAAACGCCAGATAATACGCAAGGAACGAGGTTGGTATTCACAGA
TATCGTCCCACAATCAACTGGATGCTAGTAAAGACCTTCAGCATTATTCA
GAAGATAGTGGGCGAACCTTTACAGTGATAACAGCAATTGATACTTTGTA
GTTGCAATTGATACTTTGTAGTTGTGTTTTTCTCAAATTTCAGACAACAC
TTCTCAATATTCTCATAACAGACATATAGTTATCGAGGAGATCGTATCGT
TTTTACCGTCATATACAGAGCAGAGTAATTTCGACTTATCTTGGTCGTCG
TTCTAATAGACCTTTTCATAAATTACGTCACGAACATTACTCTTAGGTTC
CAAATAAACGGGGGTGTTCGAATAAACGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009175XLOC_009175Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016429-exon-sc0000237-1575043694:87683..87762TCONS_00016429-exon-sc0000237-1575043694:87683..87762Clytia hemisphaericaexon
TCONS_00016429-exon-sc0000237-1575043694:82953..83052TCONS_00016429-exon-sc0000237-1575043694:82953..83052Clytia hemisphaericaexon
TCONS_00016429-exon-sc0000237-1575043694:82171..82230TCONS_00016429-exon-sc0000237-1575043694:82171..82230Clytia hemisphaericaexon
TCONS_00016429-exon-sc0000237-1575043694:80158..80307TCONS_00016429-exon-sc0000237-1575043694:80158..80307Clytia hemisphaericaexon
TCONS_00016429-exon-sc0000237-1575043694:79318..79470TCONS_00016429-exon-sc0000237-1575043694:79318..79470Clytia hemisphaericaexon
TCONS_00016429-exon-sc0000237-1575043694:78735..78836TCONS_00016429-exon-sc0000237-1575043694:78735..78836Clytia hemisphaericaexon
TCONS_00016429-exon-sc0000237-1575043694:78093..78166TCONS_00016429-exon-sc0000237-1575043694:78093..78166Clytia hemisphaericaexon
TCONS_00016429-exon-sc0000237-1575043694:76233..77401TCONS_00016429-exon-sc0000237-1575043694:76233..77401Clytia hemisphaericaexon
TCONS_00016429-exon-sc0000237-1510915933:87683..87762TCONS_00016429-exon-sc0000237-1510915933:87683..87762Clytia hemisphaericaexon
TCONS_00016429-exon-sc0000237-1510915933:82953..83052TCONS_00016429-exon-sc0000237-1510915933:82953..83052Clytia hemisphaericaexon
TCONS_00016429-exon-sc0000237-1510915933:82171..82230TCONS_00016429-exon-sc0000237-1510915933:82171..82230Clytia hemisphaericaexon
TCONS_00016429-exon-sc0000237-1510915933:80158..80307TCONS_00016429-exon-sc0000237-1510915933:80158..80307Clytia hemisphaericaexon
TCONS_00016429-exon-sc0000237-1510915933:79318..79470TCONS_00016429-exon-sc0000237-1510915933:79318..79470Clytia hemisphaericaexon
TCONS_00016429-exon-sc0000237-1510915933:78735..78836TCONS_00016429-exon-sc0000237-1510915933:78735..78836Clytia hemisphaericaexon
TCONS_00016429-exon-sc0000237-1510915933:78093..78166TCONS_00016429-exon-sc0000237-1510915933:78093..78166Clytia hemisphaericaexon
TCONS_00016429-exon-sc0000237-1510915933:76233..77401TCONS_00016429-exon-sc0000237-1510915933:76233..77401Clytia hemisphaericaexon
TCONS_00016429-exon-sc0000237-1491911889:87683..87762TCONS_00016429-exon-sc0000237-1491911889:87683..87762Clytia hemisphaericaexon
TCONS_00016429-exon-sc0000237-1491911889:82953..83052TCONS_00016429-exon-sc0000237-1491911889:82953..83052Clytia hemisphaericaexon
TCONS_00016429-exon-sc0000237-1491911889:82171..82230TCONS_00016429-exon-sc0000237-1491911889:82171..82230Clytia hemisphaericaexon
TCONS_00016429-exon-sc0000237-1491911889:80158..80307TCONS_00016429-exon-sc0000237-1491911889:80158..80307Clytia hemisphaericaexon
TCONS_00016429-exon-sc0000237-1491911889:79318..79470TCONS_00016429-exon-sc0000237-1491911889:79318..79470Clytia hemisphaericaexon
TCONS_00016429-exon-sc0000237-1491911889:78735..78836TCONS_00016429-exon-sc0000237-1491911889:78735..78836Clytia hemisphaericaexon
TCONS_00016429-exon-sc0000237-1491911889:78093..78166TCONS_00016429-exon-sc0000237-1491911889:78093..78166Clytia hemisphaericaexon
TCONS_00016429-exon-sc0000237-1491911889:76233..77401TCONS_00016429-exon-sc0000237-1491911889:76233..77401Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000237supercontigsc0000237:76233..87762 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.111927	0.0851269	0	0	0	0	0	0	0	0	0.183155	0.751814	0.158813	0.641857	0.364049	0.904819	2.6851	0.78671	2.15903	1.89713	0.58208	1.57088	0.170691	0.629837	0	0	0	0
Blast
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BLAST of TCONS_00016429 vs. Swiss-Prot (Human)
Match: OXR1 (Oxidation resistance protein 1 OS=Homo sapiens GN=OXR1 PE=1 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 2.286e-42
Identity = 110/285 (38.60%), Postives = 153/285 (53.68%), Query Frame = 1 
Query:   73 NKRVDQFYGFVVHWLPELYSGISTPSSDGGNNDLDEGLNIVE-----DTFADS--PATSFGWE------------KINTEDAESM-KKLRVXXXXXXXXXXXXXXXXX------EPETSAESQLLTKDQLKYLVRSLPSITVGHMMELVYSTSVHGISLKTLYRNFEDFDTTALIVVRDENHRAFGAFLSHPPAISESFYGTGECLLFSFITEKKVKTYKWSGENSFFIXXXXXXXXXXXXXXXXXXWLDEDLYHGRTHACSTFNNELLSENEDFICTGLEAWAF 849
             +R D  Y F + W PE+Y+       D G    + G  +V+     +T  DS   A +  WE             +NTE+  ++ ++L++ + +  +SK       D       P  S  S+LL  DQ++ L + LP  T+G+   LVY T  HG SLKTLYR     DT  L+V++D + + FGA  S P  +S+ FYGTGE  +F+F  E +V  +KW+G+N FFIKG   SL  GGG G   LWLD DLYHGR+H+C TF N  LS+ EDF    +E WAF
Sbjct:  597 QERTDHLYAFFIQWSPEIYA------EDTGEYTREPGFIVVKKIEESETIEDSSNQAAAREWEVVSVAEYHRRIDALNTEELRTLCRRLQITTREDINSKQVATVKADLESESFRPNLSDPSELLLPDQIEKLTKHLPPRTIGYPWTLVYGTGKHGTSLKTLYRTMTGLDTPVLMVIKDSDGQVFGALASEPLKVSDGFYGTGETFVFTFCPEFEV--FKWTGDNMFFIKGDMDSLAFGGGGGEFALWLDGDLYHGRSHSCKTFGNRTLSKKEDFFIQDIEIWAF 873
The following BLAST results are available for this feature:
BLAST of TCONS_00016429 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OXR12.286e-4238.60Oxidation resistance protein 1 OS=Homo sapiens GN=... [more]
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