XLOC_043899 (gene) - C. hemisphaerica

Overview
NameXLOC_043899
Unique NameXLOC_043899
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_56:444511..450357-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043899 ID=XLOC_043899|Name=XLOC_043899|organism=Clytia hemisphaerica|type=gene|length=5847bp|location=Sequence derived from alignment at scaffold_56:444511..450357- (Clytia hemisphaerica)
CATGGCTGGAAGAGATTTTGGCACTGAACTGGCAAATGCCTATGTCAATG AGGTTATTTCTGATGATTAATACCTCGTGCTGGCTGATGCTACAGAGGTA AATTTTGTCAATTAATTTATTAATTAATTTGTCAATTGAAAGTCGACACT AAGTTTTCCCGATAAGTCGAATTTGCTTTCCCGGGCCGTCGTGATGTCAC CAACCTTTGCATTCGCCGTAGCGCTAGAAATCGAATTTACATTATCTCGC TATTGAAAGGTTTTGTGACTGAAATTGTCATACCTGCGCTGAGGAAACTA AAGCGCCAGGCTTCAGAGGGCTGAAATATCATTAACCGTCTTGTTTATTG GGCGACGTCATTTGTGGCCCGCTCGGAAGGTGCTAAAAACTTGTTAAAGT CATTGCATTGAAGCGGAAAGACTTGGCTGACGCTAGAAAAAACTGATATG GATAATAATGGTAATAGCGTAAAGTTTTCCGCTTTGCGTCGGGCCCAAGG GAAACTATTGGGCTAATAATCAAACTGAGCGGGCAGAAAATAACAACAAC GACCTCAAACTGAACGTTATATCCTCAAAAGGCCATAACCTTTTGGTTCT ATAAATTAACCTGCGTTCGTTCGTTCATTCGTTCGTTTTTTTTGTCGATC AGCCAGGTATGCCCGTAAAAGTATCACTTTGTTTTAATGGATTTTTGAAA TCTACATGAAATACTGCGCTGATTGGGCAAGTATTTAATTGATAGGCAAT CACAGGTTTCGTTTGAGTGTCCGGTTTGAGCTCTCTTAATGTCAGAGAAC CTTATGTATACCAGAACAATTATCTTATTATCATATAACACCCATATTGC TAACACGGATAATGAACGGCTTTAGTCTAAGGGTGTACGAGTCATTGACT TCCGATCCCGAAGGACTAGACTCGAGACTCTTATTTTCCATCCAGAACGC CTGCACGTGGTTTTTACACTAACTCTTTTACTCAAAAGCAAAGAAACCAC TAAATACAATTCGTCGTCATGATTACGGAGCCTTCTGGATGGCTTGCCTA GGAAAGGTTAGAGATCTTACTCCAGCCCTTCGGACTTCAAACTCAATGGT ATGGGTTTGACGGTGTTTATTATTTTTTCTTGCCAATGTTTCGTTATTTG AAGGAAAAAGTGACGGCACTTCAGTGTTGATTGGCGATATACACGTATAC CCCAATGTACAAAACCCCGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGGTCCAAAGTTCG AAAATTGGGCGGGCCCCCCCCCTTAGCCCGCCACCCTAAGCCCCCCCCCC CCCCGGGTACAAAACCTATAATACCGAGTTTATGTATGTGTGTTTTCTGC AACGGAGGTGGTAAGGTTCTAATTTGTTTAAATCCTGACTGACTGATGAG GACGACGGTATATCAGCACTTTTACCGTCCTCGATTTTGTGGGTCAAAAC TGCGGTCTATTCCAAATCCTTCAGTCGCTTTACCGTCCTCAAAAGTGCAA ATATACATAAACTCGCTAATGTGCAGATAGCTGACATTATCTATCCCGAT TCTCACAATTTCATTGGCCAAAAGACGTCACGTGTAGGTTGGATACTTTA ATCGTAGAAATTTTAGCGAGACTCATTTTAGCGTTTTAGCGAGTTTTCCC TATTTTCGCTAAAATAAATCTCGCTAAAACACGCCGAATCGCCAGATCGC TAAAATTTATCCACGCGAAATTTCTGGTTATATTGCCTTGATACATTTTT ATCAATAGGAAGAGTTTCAGTGCAAAGAAATGCTAGAAAACGAATTCAAT CAATAATGTAATGCGAGTATTCGCTAAAATTTATCCACGCGAAATTTTTT GAAATCGTGATTCGCTAAAATAAATCCAAAAAAAATCAAGATTTTTCTGG CTCGCTAATATACGATATCTCTCCTCCTTGCGTTCGATTTCGAATCAAAG AAGTCGCTGCAATTCATCGAACGAACTTTTGAATGTTTTGTTTGAGCCTC AGTAGTTCTTGGTTTTGACAAATAAGTGTGGCGTTGAAAGGACCTCAAGA AAGAAAAGATTCTTTTATATTTAAATGTTAGTTCTTCGCTCCTCATAACT CTACATGCTCGCTGGTCGCTGGTCCATAAGTTTTGATTTAGTATTGAAAT GAAAATGGTATTGGAGGACCCGGGCATTGATCCCGGTACCTCTCGCATGC TAAGCGAGCGCTCTACCATTTGAGCTAGTCCCCCTCTAATAATAATTACA ATTTCAACTATTTAAACTTAATTTCTGTTTATTATTTCAACAAATTAGTG TTTTAATCTGTTTGTTTGAGTTCGGCTGTCACAAATTTGTTTGATGAAAT AATGAGCCTACACGTTTTTTTTTTTATTAGAACGTCGAAAATTTTTGAAG CCTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGTCCACAAA GCCTTAAAATGTTCTTAACATGTTCTTAATATTTCGGGCATCGAAGCCTT ATGTTCTTATATACTTTGTTCTTATAAAAAAAAAAACGTGTACTCCACTT AAATAAGGTTACCCTGGCAACCCTTACAATCGTGTATTTGCTGCTGTACT ACAATACTGGTAGTGTTTTGTGGCGTTCTATTTTATGAATCTGTAGACAC ACGTTGTCTGTCCGTCTGTCTTCAGGGTCCTTTGAACATTCATTATTATG GGCCATTTTAGGGACAGTTTTTTATTTTCATTAGAGAAACAAGGGCCCGG GGGGGTACTAGGGCAAGATGGGTTACGGGGATGCTCCGCTGGTCAGGGTA CCTTTTCTAACCTCCACGAGTCCCAGGTAGGGTCGCAAAAACANNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNCTTCAGGGTCACTTTTTTCGCAAATTTCGAGTC CCACGTAGGGTCCATTTTTCGAACCTCAGCGGAGCACCCCCGTCGGTCGA CAAGGGTAGTACCCCCCCCGGGAACAAGGGACTGTATCTCTCTATAGAAA CTCTTTTGTAAACTGCGTCTTAAGTTTTTTGTGTTTTTTTATTCTATTGT TAACCCGACAGAAACTTCTGTTCTTCTTTTGTTCATTCCCAAAATGTGTA AACAGAAAAAACTCTTCTTTCAATCTTTTAATCATCTTTTATTTACTCAC TTTCATTTTCGAACAAAAGGGAAAGACATTTTACACATAGATTTCTTGAA TGACATTTTTGAAGGAAGGATTTACTATATTTTACCGGGCATTTTCCTCT CTACTGCGAAGCAAACTTTTGCCTATATTCAGTAACCATGTCTTTGAAAA GCGAACGGCCGCACATATGGTCATTTTTAAATCCGAGTGCTTCCCCAGGC GTCAAAGGGACTCAAAGATATTCTATCTAGAAAGATTTAACAAAGGGGAT CGGCATGTGGTACCCAGGGAAACAATACACATTCGTTTAATGTTTTTGAT ATGTTCCCTATTTTTCAGCTCTTTGTTGATGACGAAAATGGCTACTAACA ACTCAACAACCCGAGTAAAGAAATTCTTTGAACTAACTTTCCTGGCTTTG TTGGTTATAGTTTTCTGTGTGTTGAGGCTTTACAATAGTGGTTACAGTGT ATGGACATTCCACACCATCAACAGAACAAAGGAAACAAACCCACGTGATC TCAAATTAACCAATCAGACATCAAAGTTTACAACAACTTCGAAACCAGAT TTAAAAATACCATGGAGATATCATAGCGATGACGATGGTTTTGTGTTTCC ACGTGACGAAAATTATTTGACGTCATCAAATCCACATTTGACGTCATTCT CTGGTTATTTGACGTATGAACCCATTCAACGATCTTTAACTCGCCAATTA CTCCAGTTCGAAAATGCAGTAATATTCGCGTATTTCTTAAAACGTATTCT CATAGTTCCACCAATTATCTTGATCAAAGAGAACAAAACAATCGAAATTC CTGTATCCACTATCATAGATTTCGATTTATTATCCACGATGGTGCGTTTA GTAGAAATGCCTACAAATTATAAAGAATTGTTGAACATTAGAACAACTTA TGAGGTGTGCCAGGATCCTCGACTTGGATTTTGGCTTGATTATATACCAT CACCAGAGAATATTAATTCGTGGCGTACATTGAAGCAGCAATTATTTTCC CCGTTGAAATTACGTTTCGATTATCACAATCAAACAAACTATTGGTGTCC TGGGACAGAGAAATATTTTGACCGTTGGGGGCCACCGTTACAAATTAAAG CTTTATATCGTGGTGTCCTGACTGAGCTATATGAGCGATCTGAAGATTTG ATTATGTTTCAGAGTTCTACACTGGACACTAGCGATACACGGTTCTTCGA TCGCAAACGAGTCCGTACAGCGCAGGAAATTCTACTGTTTTATATAAGGT TTTCGAGCAGAATAACACGATATACAAAACATTTAGCAGACGTTTTAGGC TATGGTTATATTGCTATACTGGCAAACGGAATCAGCAACCGAAACACCAA TTTAAACCAATATTTAGTTGATAGTTTACGTAAATTCAATACAACTTCAA TGACTGTGTTTATTGTTTCCGGTAGAGTGAAAAAGACTGCTTTTCAGGGT CTACGAGATGCAGGCTACAATCTTGTCTTCGCTGACCAATTTACGGAACG TATTAAGAAATGGTCCTTGAGGAAAGAGATATCTCACGTTTTTTCGTTAC TGTTATGTGCATATGCAGCTCATTTTATAGGTTTCCCTGGAACTCCTGAT TTGTATTTTGTCGAACATTTGAGACTGCAAGATGTCAAAATTGTAGATGG CTTGGTTGCTGAGAAAATTAACGTTAAATGGGCTAAACATACTACCAAAA GAAAAGCGGATGATCGTAAAATCTTCCAAAAAAGACCTTCTTTGAAACCG TTGGTTAAGCAAAGTAACACAAAAAAGGAAAAACAGAAAATTTCTGCTTC AGATCTCGCTTCAGATGCTATGAAGTCTACAATAACCTCCTCGAAAATAC AACAATCAAAGATTGGTACTCACCATAAAATAAAACAGAATAATCGACAT TCATCATTCTTTAAAGATGGAAAACTTTACAATATTGCGTGCACTTTTTG TAATTATGTCACTTATGTGACTGGACAAAATGGTTGTCCAACAATGAAAG TTCAATGTTCTTCCAATAAATTATAAAATAACTTGAATTAAGGTGTACAG TGATTTATGACTTTTTGACTATTATTCAACTTTCTGGCGTATTTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070523TCONS_00070523Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070523-proteinTCONS_00070523-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_56supercontigscaffold_56:444511..450357 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.64 0.48 0.19 0.05 1.35 1.52 3.06 2.66 0.9 0.67 1.77 1.37 1.34 1.21 1.47 2.93 1.53 1.87 0.07 0.09 1.05 0.87 1.51 1.06 1.33 1.9 0.38 0.19 0.47 0.19