TCONS_00016026 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016026
Unique NameTCONS_00016026
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length337

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016026 ID=TCONS_00016026|Name=TCONS_00016026|organism=Clytia hemisphaerica|type=transcript|length=337bp
tatttttcattgaCAGACAAAAAGCCATTTGGAATAATTTTGTTACATTA
TCAACATCATGCAGAAGTgatattttgccaaaattaggaAAATCAGTTCT
TCTAGCCTTGCTTTCGCTTGGTTCATCTATATAAAAAAGTCTATAGATTA
TTAGCTTCCAGGCTTCCAAGAATCTGGTTCATACTTAGTCTCTTCAGTTT
GGGCGGCACTTCCACCGCCCGGTGACCATGAATCGGGTTACCGTGAGGAT
GACAGGTGGCTTCCCaaatttttcttcgaaaattaataatcGACGGAGAC
ATTTATTCGGGACTTTACAGTATTTCAAATATGTTTT
Run BLAST on NCBI

transcript from alignment at sc0000224:187108..187444

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016026 ID=TCONS_00016026|Name=TCONS_00016026|organism=Clytia hemisphaerica|type=transcript|length=337bp|location=Sequence derived from alignment at sc0000224:187108..187444 (Clytia hemisphaerica)
AAAACATATTTGAAATACTGTAAAGTCCCGAATAAATGTCTCCGTCgatt
attaattttcgaagaaaaatttGGGAAGCCACCTGTCATCCTCACGGTAA
CCCGATTCATGGTCACCGGGCGGTGGAAGTGCCGCCCAAACTGAAGAGAC
TAAGTATGAACCAGATTCTTGGAAGCCTGGAAGCTAATAATCTATAGACT
TTTTTATATAGATGAACCAAGCGAAAGCAAGGCTAGAAGAACTGATTTtc
ctaattttggcaaaatatcACTTCTGCATGATGTTGATAATGTAACAAAA
TTATTCCAAATGGCTTTTTGTCTGtcaatgaaaaata
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008953XLOC_008953Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016026-exon-sc0000224-1491911889:187108..187444TCONS_00016026-exon-sc0000224-1491911889:187108..187444Clytia hemisphaericaexon
TCONS_00016026-exon-sc0000224-1510915933:187108..187444TCONS_00016026-exon-sc0000224-1510915933:187108..187444Clytia hemisphaericaexon
TCONS_00016026-exon-sc0000224-1575043694:187108..187444TCONS_00016026-exon-sc0000224-1575043694:187108..187444Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000224supercontigsc0000224:187108..187444 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.35548	3.23866	3.77926	5.20936	0	0	0	0	1.2493	0.631059	2.71223	1.18655	0.809027	2.11466	2.53357	2.25988	4.74908	2.52783	2.54324	2.31337	3.41611	1.27263	2.66984	1.98062	0	0	4.31925	1.02643	2.40562	5.02689
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016026 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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