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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000263_pilon:76827..79095+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_019817 ID=XLOC_019817|Name=XLOC_019817|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2269bp|location=Sequence derived from alignment at sc0000263_pilon:76827..79095+ (Clytia hemisphaerica_ch_hm2_pilon)
GAGATACTCCTGGtcgcacacacacacacacacacacttcTCTTGTTAGA
AATAATATTTTCAGACCAGGCAGTAAAGATgaaagtttttgtattttttg
tttgtatcacaacttttgtttttgGGGTCGAATCGAAAAGTGACGATAAA
CATCGTAAGTTTGAATTGAAACAATTTCATGGAATTAATGCTCTAATTTG
TCATGGGCTCGTATTtgcttgtattttttttttgacttttggaaattttc
agtaAAATATCTAGTCGGAATAAATGTAGTATAaataaaggcaaaatttt
tcttttagttaTTCTTGGTGGCATCAATGGAAGAACAACAGCAGCGCCAA
CCCCCGACGTGGAAAAGTTTATGGACGTTGTAGATGGGGGTAATAATGAT
AACATCCCTTTGGTGGAAATAAACCAAACTCCAGTGTGAtcgataaaaaG
TGATTTCaaacaaaaactgtgATTTCAAAGGAGTATTGAGTGAATGTGTA
TTCTTGAAATCAAAGATCTTTTCATACAAGGGAAATTTAGGATTTATTTC
GATTTGAATCTCCGTACAAGAATGTGGTGATTTGAATAGATAAGTTTCCT
CTTCATTTCATTGTGTCTTCTATTCTCGTCGCTGTAAACATacctgttct
tttttttttcagatactCTTGAGGGCGAAATCGAGATCCAGAGAGGTCTT
TTCGGTGGCTTACAAAATAGCATCAAGAGTGTCAAGGATGTGCAACATGG
TAAGATGTCATTTTAACATACCGTAAACAAACTCGTGCTATCTAGCACAC
ATTTTACTTTTAGACAGGTATTACGAATATTTTACATCCTAGAGAAAATC
TGGAGCCTATCTAATCCATTTTTTCCATCACAATATTCATATCTTCGCTC
TTTTCCATTTTAGACCCTCTATCTAAAGATGATCTAACAATGGAGGTACA
AATATTAATTGATGCAAGAGATGGAGTGCCAGCTACTGAAGATGATGTGG
CCGTCGCAGGTCTCAAAGAGTTAAAGACGTGCATCATTTTGCTTAAAGCT
AAAGCCATCAGTTTGGAGTCGGAGATTTCCCATAACACATGGAAAAGGCT
TTTGGGATTAATCAATGATTTAGAAGCGGAAATTCATGACGAGTTGGACT
ATCTTCTTGAATTTATCCATTCAATGGATTGTAAATTGAAAAGAACCTGC
TTTAATGATCTCCATGACACCTCAAAGACATTGCTCCACAAAGAAATTCA
GAAAGTCGGAATCATTGGTGACACATGCAGTAGTAAGCATAATCCTTTTG
ATCGTTAAAACCCTCATCGGGTTTCTAAGGAAGCTTTGATTCAGACTTTT
TCAAACAGAGAAAAACGGAAAACTTATCTCAAAAGTATCTTTCCACTATT
ATATTTCATTCTCTTGTAGAATTTACCAACGAATGCGCTGAAAAATTCAA
AGCAGCGAAAATGGGATTCACAGACTTCATGGAAAACAACATTGTagagt
tgaaaagtcaattaAAAGACATCGTTCAATTGGATTGCTTGACTCACGCC
AGTCAAAAGAAATTTCTGCAAAACAAGATCGAAAATCTTGAGCAACATGC
ATTACAGTGGATTCACCAGTTGACGGCAACCTTGAAACATTTGATCGCAT
TTGAAATAGATACTctttcatcagattttaaaaaaacttgtgATAAAGTG
AACACACAAAGACTCGCTTTCAAAGGTAACAATTGaaacacttttatcaa
ttcaTCTTCAGCGTTTTCAGCAAACGAACACGAGTTTATGATGTGCGGTA
TTAATACTCTAGCAcggtaagcttttgaaaaaaaaagaaaggacTTTGAA
AAGCAGTTCTTGTAGACAGAGTTGATCACGACTGTTATggcttcattttc
tttatagaTAACAAAGGAACAACGGGTGAATTAAACGACCTTGTCGGCAT
CAAAACAGCACTAGGAGGACTCTCCACGGACGCAATGATGATAACTAACA
GATTTTTGATCGCATACGACGTCCTCCTCCACTTAAAAGGATTGGTCGAT
GATAAAGAATTCAACACCTGTTATGATAAAGCATCAGAACTTTATTATCT
TGTGCAAGGTTTTAAACTTCAAATAGACGAATTGTTGGCTTCAGTCACAA
AAAGAGATGTACTGGTGATGTTTGAAACCAAGATAAATGATTTCATTGGG
GTTTCATCAGATGACACCGCTCCAGCCACTGGCTTTACCAAGGCTAAAGA
AGATTTCATGACTAATTTG Coding sequence (CDS) from alignment at sc0000263_pilon:76827..79095+ >XLOC_019817 ID=XLOC_019817|Name=XLOC_019817|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2718bp|location=Sequence derived from alignment at sc0000263_pilon:76827..79095+ (Clytia hemisphaerica_ch_hm2_pilon)
GAGATACTCCTGGtcgcacacacacacacacacacacttcTCTTGTTAGA
AATAATATTTTCAGACCAGGCAGTAAAGATgaaagtttttgtattttttg
tttgtatcacaacttttgtttttgGGGTCGAATCGAAAAGTGACGATAAA
CATCGAGATACTCCTGGtcgcacacacacacacacacacacttcTCTTGT
TAGAAATAATATTTTCAGACCAGGCAGTAAAGATgaaagtttttgtattt
tttgtttgtatcacaacttttgtttttgGGGTCGAATCGAAAAGTGACGA
TAAACATCttaTTCTTGGTGGCATCAATGGAAGAACAACAGCAGCGCCAA
CCCCCGACGTGGAAAAGTTTATGGACGTTGTAGATGGGGttaTTCTTGGT
GGCATCAATGGAAGAACAACAGCAGCGCCAACCCCCGACGTGGAAAAGTT
TATGGACGTTGTAGATGGGGatactCTTGAGGGCGAAATCGAGATCCAGA
GAGGTCTTTTCGGTGGCTTACAAAATAGCATCAAGAGTGTCAAGGATGTG
CAACATGatactCTTGAGGGCGAAATCGAGATCCAGAGAGGTCTTTTCGG
TGGCTTACAAAATAGCATCAAGAGTGTCAAGGATGTGCAACATGACCCTC
TATCTAAAGATGATCTAACAATGGAGGTACAAATATTAATTGATGCAAGA
GATGGAGTGCCAGCTACTGAAGATGATGTGGCCGTCGCAGGTCTCAAAGA
GTTAAAGACGTGCATCATTTTGCTTAAAGCTAAAGCCATCAGTTTGGAGT
CGGAGATTTCCCATAACACATGGAAAAGGCTTTTGGGATTAATCAATGAT
TTAGAAGCGGAAATTCATGACGAGTTGGACTATCTTCTTGAATTTATCCA
TTCAATGGATTGTAAATTGAAAAGAACCTGCTTTAATGATCTCCATGACA
CCTCAAAGACATTGCTCCACAAAGAAATTCAGAAAGTCGGAATCATTGGT
GACACATGCAGTAACCCTCTATCTAAAGATGATCTAACAATGGAGGTACA
AATATTAATTGATGCAAGAGATGGAGTGCCAGCTACTGAAGATGATGTGG
CCGTCGCAGGTCTCAAAGAGTTAAAGACGTGCATCATTTTGCTTAAAGCT
AAAGCCATCAGTTTGGAGTCGGAGATTTCCCATAACACATGGAAAAGGCT
TTTGGGATTAATCAATGATTTAGAAGCGGAAATTCATGACGAGTTGGACT
ATCTTCTTGAATTTATCCATTCAATGGATTGTAAATTGAAAAGAACCTGC
TTTAATGATCTCCATGACACCTCAAAGACATTGCTCCACAAAGAAATTCA
GAAAGTCGGAATCATTGGTGACACATGCAGTAAATTTACCAACGAATGCG
CTGAAAAATTCAAAGCAGCGAAAATGGGATTCACAGACTTCATGGAAAAC
AACATTGTagagttgaaaagtcaattaAAAGACATCGTTCAATTGGATTG
CTTGACTCACGCCAGTCAAAAGAAATTTCTGCAAAACAAGATCGAAAATC
TTGAGCAACATGCATTACAGTGGATTCACCAGTTGACGGCAACCTTGAAA
CATTTGATCGCATTTGAAATAGATACTctttcatcagattttaaaaaaac
ttgtgATAAAGTGAACACACAAAGACTCGCTTTCAAAGAATTTACCAACG
AATGCGCTGAAAAATTCAAAGCAGCGAAAATGGGATTCACAGACTTCATG
GAAAACAACATTGTagagttgaaaagtcaattaAAAGACATCGTTCAATT
GGATTGCTTGACTCACGCCAGTCAAAAGAAATTTCTGCAAAACAAGATCG
AAAATCTTGAGCAACATGCATTACAGTGGATTCACCAGTTGACGGCAACC
TTGAAACATTTGATCGCATTTGAAATAGATACTctttcatcagattttaa
aaaaacttgtgATAAAGTGAACACACAAAGACTCGCTTTCAAAGaTAACA
AAGGAACAACGGGTGAATTAAACGACCTTGTCGGCATCAAAACAGCACTA
GGAGGACTCTCCACGGACGCAATGATGATAACTAACAGATTTTTGATCGC
ATACGACGTCCTCCTCCACTTAAAAGGATTGGTCGATGATAAAGAATTCA
ACACCTGTTATGATAAAGCATCAGAACTTTATTATCTTGTGCAAGGTTTT
AAACTTCAAATAGACGAATTGTTGGCTTCAGTCACAAAAAGAGATGTACT
GGTGATGTTTGAAACCAAGATAAATGATTTCATTGGGGTTTCATCAGATG
ACACCGCTCCAGCCACTGGCTTTACCAAGGCTAAAGAAGATTTCATGACT
AATTTGaTAACAAAGGAACAACGGGTGAATTAAACGACCTTGTCGGCATC
AAAACAGCACTAGGAGGACTCTCCACGGACGCAATGATGATAACTAACAG
ATTTTTGATCGCATACGACGTCCTCCTCCACTTAAAAGGATTGGTCGATG
ATAAAGAATTCAACACCTGTTATGATAAAGCATCAGAACTTTATTATCTT
GTGCAAGGTTTTAAACTTCAAATAGACGAATTGTTGGCTTCAGTCACAAA
AAGAGATGTACTGGTGATGTTTGAAACCAAGATAAATGATTTCATTGGGG
TTTCATCAGATGACACCGCTCCAGCCACTGGCTTTACCAAGGCTAAAGAA
GATTTCATGACTAATTTG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000263_pilon | genome | sc0000263_pilon:76827..79095 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1000-1359:1910 |
| Aaloc | 694-996:1422 |
| Aaloc | 325-690:916 |
| Aaloc | 238-321:665 |
| Aaloc | 157-234:311 |
| Aaloc | 1-153:1 |
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