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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:1022363..1026269+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_027415 ID=XLOC_027415|Name=XLOC_027415|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3907bp|location=Sequence derived from alignment at sc0000043_pilon:1022363..1026269+ (Clytia hemisphaerica_ch_hm2_pilon)
CTGGCTGATGGCGAAAGTTGGGTCACAATGATTCCAAGAGCAGaacaaac
caaatcaaatgaaCCTTTAATTGTGAATCGTGAGAAGAGACGCAATGATA
TaaatttattaagaaaaaataGCAGACAAACGAGTATACAATCAAAGAGG
TTTGTACTattttttgtcttgttttttgGTGGAGAGATGATGATGCATGC
GGATGGACGGGTGGTCGAAAAAATTCCTGGGTTTTTTAAAATCACACCAG
TAATTCCAGTGCTtcaaataaggaaatttcagtacGTGGTCGGTAATTTT
TTGAGCACAACGAAAATAATTTGAGCAAGCAAGCAACGCCAAaggtagcg
actccagaagtcatgcaactttggttgacgtcaaaccaaatgtttcattt
ttccgtgaactttgaacccttggaacttttattctatgtatgctaaagcg
ttccggtttttactaaatgaaagcccgtgatcttggctttccagcggtat
ataacactgtggacacgggctagacggcaaattggtaaaatgccaaacgt
tttgcaacattttgaaaattgtttgccgacgggagaaaaaaaatttacaa
ctatcgaagaacaaatgtgtctggatgaaacagaggaaaatgtatttgga
ggctgaaactttgtatgtttatcagaaaaagggtgaggaattcaaaaatc
acaatcgctaattctagttctttcattttcatgtagtttttttaactttt
ttgcttctttagcatgggaatgtcctgccgaaatggattttcttttcatt
tggggttctCCTTTCctaaaaacttattctttactcataagtttttgttc
ctccatttccagaggccccttgaaaatgggtcctaccaccttttttgact
catttcaaccttttccaagctattttcttcaaaaacaaaaataaaacaat
gcaatgtcttcttttttcaaaaaaagatatatctttcgttattttgataa
atatactaaatattttacaaatatttttatataataatattttaacacca
tcaaagaattctccctccaaatttgaggtctctagctacactagaaaaag
agatatgcaaaatttaagaagcatgactggaaaatttcttttttttcttt
tttgacacatttttggaatttttccaagctattttcctaacctttttttt
gacatttttagtcaaatttttgacactaaaatttgaatatctttacaacc
actaatcctctggaggcctatgacccctcattttctttctttttcaaagc
tctacaagataggatagattttgaaaaaaaatttaaacttgaaaaatctt
ctggagttgctaccaAAGGCAAGGGGTCTGCTGAGCAAGGGGTCTGGCAG
AACCCCATTAGAAAAGTCTGAAATGACCtttagattggctaaacaccAGT
ATTaatcagtgcgtcacaaacagccatatataaacaaaactcaacattct
cacaaaagttgtcttttcgatttcccaaacattcgtctaaagcgttcact
tccacaataatttaatctaattgaattgcaatttcgttcagtccacagtc
ggcttcaaaatatacacgtgtttttatttacacgACCCTcaacatggccc
gagaattctttTATTGGAATGCGCATAAAGCCCGAGGATGGCCCGAGGAT
GGCCCAAGTTTTcgggccgcgggcgggcctcaggcgggccacacgcgggc
ctcaggcgggccacacgcgggctaacttttgaaatcatgatttaaacctg
cgtgtaatttcaggactgcattttttcaatattttctctagaaaaacttg
atttcactgaaatatttgctattaaactggtcctggttttaaactttgaa
gCGTGGTCCACAAGGAGTTTGTTAAGTTTATTTAGCAAGATGAACTGGAT
GAAACGCaacgaaataaattaaaattaacattttcacacattttcaacgt
cattttcacgttttaatttcatttatgACTGGACAAGCTGGATTAATCAA
TGGAATCTTCTGAGACAGGCACAAAGGTATAGGTTGAACAGTTTACGTCT
TAAGTCGTAGCCCGAACGTGGTCCGAATGATTCGGGTCAAGTTcaggcca
aaagaattgatagggtctctcggcccgaacatggcccgaagagttGAGGG
Tcgtttatttacgtgaccgaagtgcctactaaaacaatccgggggtaagt
ggcaaagcaacacagcagattattcgtaaagtaaagaaatatcttttggc
attgacaatcaaatatgatatattatattatatttattcCTTTAAGGTGG
CAATcacaaaaatatcttcattttgcgtcctcgttgggtttcagtaatca
aacttaatcgatgCTATTTAAATAGCATGTTCATTCCTTCAAAATTAAAG
ACTTTTCCTTTAATAATACAGGAGTTGATAGTTTCTgttaaaataaaaag
gaaattttcctttaaaaatacggataaattgaattatttaaaaggaattt
tgtggctgaaattctctgaaaaaataagaaatatccAGGCTTTGAACTAA
GTAAAGCTTCTTATAAGAAAGAACACGTGTATATCATAATGAAAACCCAT
tgtcctttgaaaatacaggaACTGAATTTTCCCtaaatacaaaagaatat
tttcctttgaaaatacggatGAATATAGGTTTATTGTTCCTAGTttattg
aatagaaatattttgggaaattgcCTCTGAACAGAACACATAGTAAATCA
CTAAGGGTCAGTGActcttactcttgtctcccgaatagatgggggggggt
ccgaataagcaggggggtaggaaaattttctaaattctaataagcggggg
ggggggggtaatttgaagacagaatttttttcaaatgatatcgatttcaa
caacaaaaatgaaactttaacaaatgaacacgtgaaataagaaccaatac
taacaaaaaggaaaattaacaagtttaaggcccatctacactgtaataaa
atattgaattattttaatttaattagcggggggtcttaataagagcgggg
ggtatggattttttttcttttaacaatTAGCAGGGGGAcatctattcggg
agacaacaGTACTATACAATATGGGAAATTTACCTCTCAACATGACAAAT
AGTATAGATgaacattttttattaaatttctaaATTGTCCCTATTTGTAT
TCTTTATTTACAGTGTTTCATTTTGTCCCAAATCCACTAATATTTCATTC
TAAACTATAGCCAACTATCATTTTGCATGTTCCAAAGAATTACTTTAAAA
GTGCTCAAAACAATAAATAAACTGCACTTCCTTCTAGATTTCGACTGGAA
AAACCACTCCAAGCGGAGCATTATGAtcaggaaaaagtcaaaatgatgAC
CAAAAATATCCTCAGGAAGGGTAAAGATACTCAAAATCATTTGAAATACT
TAAGAAATGCTTTCGCTGAATCGTGTCAGAACATTGATGCTTTTTTGGAG
GTTGACAATGCCCTTTACACACTTGTTGGGTATTTAACTGGCAACAATAC
AACATTACAATTAGAAGCTGTTTGGTGTTTAACAAATATCACTGctaatg
aaaatcaaaatattgaaacctTCGTGAAAGCTACTTCAGCATACTTGATT
ACTTTCTTGAAAAGTGGGAGTGTTCTCTTACAAGATCAAAGTGCATGGGC
ATTGGGTAATATGGCAGCTGATAGCCATAACATTAGGGAAATATTGAAAG
CTCAAGGGATTGTGAAGCCACTCACTGAACTGGTTGAggtaattgttttt
attcttttgatatGGTATGATATGACCAGAATTCACTCCTTGCTTTATCA
TTATTAA Coding sequence (CDS) from alignment at sc0000043_pilon:1022363..1026269+ >XLOC_027415 ID=XLOC_027415|Name=XLOC_027415|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1338bp|location=Sequence derived from alignment at sc0000043_pilon:1022363..1026269+ (Clytia hemisphaerica_ch_hm2_pilon)
CTGGCTGATGGCGAAAGTTGGGTCACAATGATTCCAAGAGCAGaacaaac
caaatcaaatgaaCCTTTAATTGTGAATCGTGAGAAGAGACGCAATGATA
TaaatttattaagaaaaaataGCAGACAAACGAGTATACAATCAAAGAGC
TGGCTGATGGCGAAAGTTGGGTCACAATGATTCCAAGAGCAGaacaaacc
aaatcaaatgaaCCTTTAATTGTGAATCGTGAGAAGAGACGCAATGATAT
aaatttattaagaaaaaataGCAGACAAACGAGTATACAATCAAAGAGAT
TTCGACTGGAAAAACCACTCCAAGCGGAGCATTATGAtcaggaaaaagtc
aaaatgatgACCAAAAATATCCTCAGGAAGGGTAAAGATACTCAAAATCA
TTTGAAATACTTAAGAAATGCTTTCGCTGAATCGTGTCAGAACATTGATG
CTTTTTTGGAGGTTGACAATGCCCTTTACACACTTGTTGGGTATTTAACT
GGCAACAATACAACATTACAATTAGAAGCTGTTTGGTGTTTAACAAATAT
CACTGctaatgaaaatcaaaatattgaaacctTCGTGAAAGCTACTTCAG
CATACTTGATTACTTTCTTGAAAAGTGGGAGTGTTCTCTTACAAGATCAA
AGTGCATGGGCATTGGGTAATATGGCAGCTGATAGCCATAACATTAGGGA
AATATTGAAAGCTCAAGGGATTGTGAAGCCACTCACTGAACTGGTTGAgg
taattgtttttattcttttgatatGGTATGATATGACCAGAATTCACTCC
TTGCTTTATCATTATTAAATTTCGACTGGAAAAACCACTCCAAGCGGAGC
ATTATGAtcaggaaaaagtcaaaatgatgACCAAAAATATCCTCAGGAAG
GGTAAAGATACTCAAAATCATTTGAAATACTTAAGAAATGCTTTCGCTGA
ATCGTGTCAGAACATTGATGCTTTTTTGGAGGTTGACAATGCCCTTTACA
CACTTGTTGGGTATTTAACTGGCAACAATACAACATTACAATTAGAAGCT
GTTTGGTGTTTAACAAATATCACTGctaatgaaaatcaaaatattgaaac
ctTCGTGAAAGCTACTTCAGCATACTTGATTACTTTCTTGAAAAGTGGGA
GTGTTCTCTTACAAGATCAAAGTGCATGGGCATTGGGTAATATGGCAGCT
GATAGCCATAACATTAGGGAAATATTGAAAGCTCAAGGGATTGTGAAGCC
ACTCACTGAACTGGTTGAggtaattgtttttattcttttgatatGGTATG
ATATGACCAGAATTCACTCCTTGCTTTATCATTATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:1022363..1026269 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 151-669:3389 |
| Aaloc | 1-147:1 |
|
