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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000177_pilon:73470..75443+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038209 ID=XLOC_038209|Name=XLOC_038209|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1974bp|location=Sequence derived from alignment at sc0000177_pilon:73470..75443+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTAAATTTGTTATGACAAAGAACAGTATCGAACTTTTTCATCGAGC
AAttttatcgaatgatttatcgagAACGAAATTGATCCTCGAGGAAGCGA
TGAAAGATCCTCGATTCGATATCGATGAAATAAATGAAGAAGGTTTAACG
GCTTTACAGTTCAGTTGTTTCGCCGGACATCTTGAAATTGTCAAAGTTTT
GATATCGTATAAGGCAGACGTAAAGAAGCGAGATAGAGACGGGAATTCGT
TACTCCACGCGGCCGCATTAGCCGGCAAAGTAGACATTGTGAAATATCTA
TTACGTTGTGGCATAAAGCCGACAATACGAAACGATGATAACCAGATGCC
AATCGACTTTTCAGAAGAAATTGCAATTATCGTGATTCTTTTACGCGCTA
TGTTAGACCAGGGATATTTAGAAGAAATGCAAGAATACATGATCGACCAT
CCTAAACTAAAacgaaacatttttgaagagtTAAAACGAGTGAAATGTCG
AGAGACTgagcaaaatcaaattttacaaGAGCTTCCCTATTCCTCACATA
CGAGCCCTCGTAGACAAATCAACAAGAGCCGCAAACCTTCGGATGAGCTA
CAAGGTCGTTCTATtagtactttttcaaaattatcagaCTCAATGCAATA
TTTGGACCAAATTGATCGAAATGAAACCAATAATAATTATAACCAACATT
ACCATAAAAATAATGGGTATTCTTATGATAATGCACCTACATTGAAACGA
AACAATAGCACCAGTAGTTCTTCTAGTCATGGATCGCGGTCATCCAGATC
ATCAAAAGGAAGTGGGGCTGGTATATTACGTCATGAGTCAAACGATTACG
AATCGAGGCataaacaaacacaaaaatatctcgAAAATCGATTCCCGCAA
TCGATGAAATCGGTTAGTTTTGAGTCCGATCATCAAGGAGGAAACAATCG
AAGCTATTCAGACGGTTACCATAGCGATTCGTTTGATGACAAAATACCAA
AAGGTCGTCTGTCTCGATCATCCAGTATTTCATCTCACTCTTCAAACCAT
ACAGGTGTTTTTAGTGACACGTGCTCAAACTTCGATTTTCCCACCCAGCC
TCCACCCCACGAACCACCCAAAACGCCAACACCGCAACAAGAAGAAGCCA
TTTATGCTAACTTCCAGCCAGTTAGATCAAACAGTTTACCAACTATAGCT
GAAGGAGAAAATATATATGAAAATCTACCTTTGAGAGGAATTAAACCGAG
TCCAAAACAACAAACGCCCAAATTTGTCGCTCCGCCCTTACCACCACGAC
AACCCACCACCCCACCGAAACCAAAGCCACAACAATCAAATCGCCATAGT
AACTTGTATGAATACGAGTCTACATCGTACTCAACTAATACCTATCAAAG
AGATACATCGTATCCAGTAAATACCAACCAAAGGGATACATCGTACTCGG
CCAATGAACGTCAACTTGGCTCCGAAACGGACAGTGGTATTGACATTAAC
GAGACTGCTGGTCGTGTTTTCGCACTATCTTTAGACGACCAACAACAGCC
AATTTATCCTGAAACACCAAACATAGTCGAGCCTCCTACACAGACATCCT
ATTCTAAGCCTATTGGAATTTATTACTCTCAACAAATGAATGTAACTGCT
CGGCAATCGGGCAAAAGAGACAATAACGTGCTTATTGCAGCTAATACGCA
TGCGCATTTAAACCCAAAATATAGGAGTTGGAATGGTAGAACATTATTAG
AATCTCAACAACAAGCACAAGATAACCTAGCACCTTACTCTAATCATGGC
TCCCGCTCGAGCGGCCACCCTCAAAGGACATCACGTGACGATTATGACGT
ATATAAAAGTCAACAAGCGCATGCGCAAGAACAAAATGGATATCAAGCAC
AGCGCAGACATACAAATAGCGGATTGGAACTAAGACAATTTAATTTTGAT
CATCAACCTGAGATTAtgttataa Coding sequence (CDS) from alignment at sc0000177_pilon:73470..75443+ >XLOC_038209 ID=XLOC_038209|Name=XLOC_038209|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3948bp|location=Sequence derived from alignment at sc0000177_pilon:73470..75443+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTAAATTTGTTATGACAAAGAACAGTATCGAACTTTTTCATCGAGC
AAttttatcgaatgatttatcgagAACGAAATTGATCCTCGAGGAAGCGA
TGAAAGATCCTCGATTCGATATCGATGAAATAAATGAAGAAGGTTTAACG
GCTTTACAGTTCAGTTGTTTCGCCGGACATCTTGAAATTGTCAAAGTTTT
GATATCGTATAAGGCAGACGTAAAGAAGCGAGATAGAGACGGGAATTCGT
TACTCCACGCGGCCGCATTAGCCGGCAAAGTAGACATTGTGAAATATCTA
TTACGTTGTGGCATAAAGCCGACAATACGAAACGATGATAACCAGATGCC
AATCGACTTTTCAGAAGAAATTGCAATTATCGTGATTCTTTTACGCGCTA
TGTTAGACCAGGGATATTTAGAAGAAATGCAAGAATACATGATCGACCAT
CCTAAACTAAAacgaaacatttttgaagagtTAAAACGAGTGAAATGTCG
AGAGACTgagcaaaatcaaattttacaaGAGCTTCCCTATTCCTCACATA
CGAGCCCTCGTAGACAAATCAACAAGAGCCGCAAACCTTCGGATGAGCTA
CAAGGTCGTTCTATtagtactttttcaaaattatcagaCTCAATGCAATA
TTTGGACCAAATTGATCGAAATGAAACCAATAATAATTATAACCAACATT
ACCATAAAAATAATGGGTATTCTTATGATAATGCACCTACATTGAAACGA
AACAATAGCACCAGTAGTTCTTCTAGTCATGGATCGCGGTCATCCAGATC
ATCAAAAGGAAGTGGGGCTGGTATATTACGTCATGAGTCAAACGATTACG
AATCGAGGCataaacaaacacaaaaatatctcgAAAATCGATTCCCGCAA
TCGATGAAATCGGTTAGTTTTGAGTCCGATCATCAAGGAGGAAACAATCG
AAGCTATTCAGACGGTTACCATAGCGATTCGTTTGATGACAAAATACCAA
AAGGTCGTCTGTCTCGATCATCCAGTATTTCATCTCACTCTTCAAACCAT
ACAGGTGTTTTTAGTGACACGTGCTCAAACTTCGATTTTCCCACCCAGCC
TCCACCCCACGAACCACCCAAAACGCCAACACCGCAACAAGAAGAAGCCA
TTTATGCTAACTTCCAGCCAGTTAGATCAAACAGTTTACCAACTATAGCT
GAAGGAGAAAATATATATGAAAATCTACCTTTGAGAGGAATTAAACCGAG
TCCAAAACAACAAACGCCCAAATTTGTCGCTCCGCCCTTACCACCACGAC
AACCCACCACCCCACCGAAACCAAAGCCACAACAATCAAATCGCCATAGT
AACTTGTATGAATACGAGTCTACATCGTACTCAACTAATACCTATCAAAG
AGATACATCGTATCCAGTAAATACCAACCAAAGGGATACATCGTACTCGG
CCAATGAACGTCAACTTGGCTCCGAAACGGACAGTGGTATTGACATTAAC
GAGACTGCTGGTCGTGTTTTCGCACTATCTTTAGACGACCAACAACAGCC
AATTTATCCTGAAACACCAAACATAGTCGAGCCTCCTACACAGACATCCT
ATTCTAAGCCTATTGGAATTTATTACTCTCAACAAATGAATGTAACTGCT
CGGCAATCGGGCAAAAGAGACAATAACGTGCTTATTGCAGCTAATACGCA
TGCGCATTTAAACCCAAAATATAGGAGTTGGAATGGTAGAACATTATTAG
AATCTCAACAACAAGCACAAGATAACCTAGCACCTTACTCTAATCATGGC
TCCCGCTCGAGCGGCCACCCTCAAAGGACATCACGTGACGATTATGACGT
ATATAAAAGTCAACAAGCGCATGCGCAAGAACAAAATGGATATCAAGCAC
AGCGCAGACATACAAATAGCGGATTGGAACTAAGACAATTTAATTTTGAT
CATCAACCTGAGATTAtgttataaATGTTTAAATTTGTTATGACAAAGAA
CAGTATCGAACTTTTTCATCGAGCAAttttatcgaatgatttatcgagAA
CGAAATTGATCCTCGAGGAAGCGATGAAAGATCCTCGATTCGATATCGAT
GAAATAAATGAAGAAGGTTTAACGGCTTTACAGTTCAGTTGTTTCGCCGG
ACATCTTGAAATTGTCAAAGTTTTGATATCGTATAAGGCAGACGTAAAGA
AGCGAGATAGAGACGGGAATTCGTTACTCCACGCGGCCGCATTAGCCGGC
AAAGTAGACATTGTGAAATATCTATTACGTTGTGGCATAAAGCCGACAAT
ACGAAACGATGATAACCAGATGCCAATCGACTTTTCAGAAGAAATTGCAA
TTATCGTGATTCTTTTACGCGCTATGTTAGACCAGGGATATTTAGAAGAA
ATGCAAGAATACATGATCGACCATCCTAAACTAAAacgaaacatttttga
agagtTAAAACGAGTGAAATGTCGAGAGACTgagcaaaatcaaattttac
aaGAGCTTCCCTATTCCTCACATACGAGCCCTCGTAGACAAATCAACAAG
AGCCGCAAACCTTCGGATGAGCTACAAGGTCGTTCTATtagtactttttc
aaaattatcagaCTCAATGCAATATTTGGACCAAATTGATCGAAATGAAA
CCAATAATAATTATAACCAACATTACCATAAAAATAATGGGTATTCTTAT
GATAATGCACCTACATTGAAACGAAACAATAGCACCAGTAGTTCTTCTAG
TCATGGATCGCGGTCATCCAGATCATCAAAAGGAAGTGGGGCTGGTATAT
TACGTCATGAGTCAAACGATTACGAATCGAGGCataaacaaacacaaaaa
tatctcgAAAATCGATTCCCGCAATCGATGAAATCGGTTAGTTTTGAGTC
CGATCATCAAGGAGGAAACAATCGAAGCTATTCAGACGGTTACCATAGCG
ATTCGTTTGATGACAAAATACCAAAAGGTCGTCTGTCTCGATCATCCAGT
ATTTCATCTCACTCTTCAAACCATACAGGTGTTTTTAGTGACACGTGCTC
AAACTTCGATTTTCCCACCCAGCCTCCACCCCACGAACCACCCAAAACGC
CAACACCGCAACAAGAAGAAGCCATTTATGCTAACTTCCAGCCAGTTAGA
TCAAACAGTTTACCAACTATAGCTGAAGGAGAAAATATATATGAAAATCT
ACCTTTGAGAGGAATTAAACCGAGTCCAAAACAACAAACGCCCAAATTTG
TCGCTCCGCCCTTACCACCACGACAACCCACCACCCCACCGAAACCAAAG
CCACAACAATCAAATCGCCATAGTAACTTGTATGAATACGAGTCTACATC
GTACTCAACTAATACCTATCAAAGAGATACATCGTATCCAGTAAATACCA
ACCAAAGGGATACATCGTACTCGGCCAATGAACGTCAACTTGGCTCCGAA
ACGGACAGTGGTATTGACATTAACGAGACTGCTGGTCGTGTTTTCGCACT
ATCTTTAGACGACCAACAACAGCCAATTTATCCTGAAACACCAAACATAG
TCGAGCCTCCTACACAGACATCCTATTCTAAGCCTATTGGAATTTATTAC
TCTCAACAAATGAATGTAACTGCTCGGCAATCGGGCAAAAGAGACAATAA
CGTGCTTATTGCAGCTAATACGCATGCGCATTTAAACCCAAAATATAGGA
GTTGGAATGGTAGAACATTATTAGAATCTCAACAACAAGCACAAGATAAC
CTAGCACCTTACTCTAATCATGGCTCCCGCTCGAGCGGCCACCCTCAAAG
GACATCACGTGACGATTATGACGTATATAAAAGTCAACAAGCGCATGCGC
AAGAACAAAATGGATATCAAGCACAGCGCAGACATACAAATAGCGGATTG
GAACTAAGACAATTTAATTTTGATCATCAACCTGAGATTAtgttataa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000177_pilon | genome | sc0000177_pilon:73470..75443 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1974:1 |
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