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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000219_pilon:12250..15134+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041366 ID=XLOC_041366|Name=XLOC_041366|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2885bp|location=Sequence derived from alignment at sc0000219_pilon:12250..15134+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGCCACTGAACAACAACAGCCTGGTCAAGAAATGTGAAGTGGAAAC
TCAAAGACTTTTCCAATTGTTTCTGACCGTTGGAGAAGATTCGCACAAGT
TTCAATCCTCAGAAACTGATGAAGGTAAGAAGCTTTTATCTGCCATTTAT
TGTTAAGGTAAGCTAAGATTTCGTTTTCTAAGATTTTTTCCttaaattga
atcatttttgcGTGGTTTTGATTTGGCGATCGGCAAAAATTTTGAGACGG
TTTGAGACACTATATTGgctgaaaaatttttattttgtatactATAGTCG
TATAGAAAGTGATTTTTCGCatagtgttttttttctcgaacaATTTAGAG
CATCGCcgatttgttttaattttacgCGGGGATTTGATTTAAGcgaattc
gccaaatttaatccccgctaaaattaatccactaaaggttttactatttt
tattcaTGGTAGAATTACTTGACTGGCAACGGCTTTAAGTCCCCACCTGA
AGATGTTGAAAAACTATTGATTTCCTAGGGTGAATTTTGTACCTTCAATG
CTGGCTCACCATGGGGGACGGTTACTTCCTCTCTCTAGGGGATTTCCTTC
CAGCAATAATTAAAACATGAACAAGATGTTTGATCAGTTTTTCTGCGtga
atataattttttcaatgGATATAATTGAGAGTGTATGGTTTTGCATTTTG
CACACTTATCCTGAGGGGAAAGTCTCATAACTGTTCCAAAgacaaacatt
tcaaacaaacgTAGTTTATTGTTGTTATAAACTTTTCAAAGTTCACAAAT
GTTTAGATTTTATTCGAATTGTAAGTTTTTCTTGTTGAAACGAGAactta
atgtttttgtttgatggTCTGTGTGACGTCACGGATTTTGTATAATTGTT
GTTCGAGGTGCGTCAGAAGGATTGTGTTAATGTGAAAAACGTGAAGAAAA
TTCGCACGTTTTTTCTTTGCAGGATAAGAGAATGAGAGTTGTCAATTTGC
TTTAATTTGTAAGTTATCTGGGAACTGTTACAGTACTTCTCTACCAAAAT
AATACATTTTTAGTCGATGTGATAAAGTCGAAGCAAACTGGAGAAATCAC
TTCAGGTTTTGTGTTACTTTTTAGAAGCTGCACCAGGTGAGTTTTGCTGG
CAAATGAGAGAGGACTTTGTTGGCAGCGGTTTTTCATCAATTGTATATTG
TCTCCTTTACTTTACTTTGATATTACAATATTACCATTCAGACCAATCAT
GATTTTTAAATCAGAGTCAGACACGAAAAACTCTTGCATGAActatgaaa
aaattctttttattttttgtgtcaCCAAGAATGACGGTGATCAACTTTGA
TAAGCATTTTAAAAGCGCCAATTATTGTCAATGAATggtaaacttttaat
tttttataagatgctaaaatgtttttaagtaGCTTTTTCTCCGTGATAAT
AATATCCTTTAATTTCCTTTTCGTTTCAGTTCAATATTTCGTTCGTGAGA
GGCCGTCGTCAGTTCGTTCATCCGGCTCCTTTGGCAGTGCTTCAAACATC
AGTTCACGAGGTCTTGATGATGCCTCGAAGTTTCAAAATGCGTTCGACCA
TCGGAAGCAAAGTGATGGGATTTCCATACCCAACAGGAGTGGTAGCTCAC
CCATGATAAACAGTATCGCTTATTCGCCAAACTTAGTATCCGATTCAGCG
CGAACACCGCCCAATTCTTTTAACGCTTCTTTCACTTCATGTACACCGCC
CTCTTCCTCACCTTCCTTGAAACATGCCATCGAAAGAAAACGACCAAGCT
CGTCTGACTTCTCACGGTACAAGCGAACTGTCGCGGAAGGTCCATCCGCC
GCTGCCGCCACCTTTATACCTTTTCCAAGTGAACAGCAACGGCCGCGCTC
GAATACAGGTCCAAGTGAAGAAGTGTTGGCACAAACGGCACGAACCATTG
CTGATATCGGTGATGATATTGAACAAGAATACGGAAACAAAATGACGGTT
AGTTTGACCACTTGTATGCACTCCGCCTTATTTTCTTCACGTGCTTTATA
CGCTATTAGCCAGTGGTTTGAATATGGATCAGTGTCGATGCCCTTTTTCC
TTCTTACTCCTTGTTTGAAAACCCCTTTTTTCACTTACAGAAATTAACAA
CGGATTTGGTTGGCTTTCTTTCGGAGAATACGTCGATGTCTTACGAAGTG
TTTGCAGCGCACGTCAACGAGTTGGTTGGAGAGGACCGCAATTGGACCAA
CCTCGTGTTCGTCATGCATCTTGGGAAGCGAGTGGTTCGCACAACTTCTT
ACGCAGGCGAATATTTCGGAAGATTCCTCGGAAGTGCTTTTGGTGAAGAA
ATCGCTCGTTCGGGAAGCACCGTAAGTAGTTGTTATCTTTCCATTACTCA
CCCTTAACTTCTTTTATAacgagaaaaaagaataaataaatttgaaataa
ggTATGGTATTTTGATTGTTTGCAGTCTAATCGTTAAGCatttaatagac
gatatcggcttaacgaaattctccccgaatgattacccatgatgcattgc
gcaaaaaattcagtaagttaatattgtccgtgaatttttttgcgcaatgc
atcatgggtaatcattcggggagaatttcgttaagccgatatcgtctatt
aaatGCTTAACGATTATTGAAATCAAACAGCATAAGCTGGCcgttttgct
gtgaaagaggaCTGATTTTCAAAGATCATAaataaaaatcagctttttta
GaATCCATTGGAGTATCAAACTGTAATGAATTGAATAATCTTTCATATGG
ATAATTTTTGTAATAGGATCGATATGTTCGCGAgcattcgaaaaagaaat
cctCTGCAGGGGAAGAAGAAGGGTCAGCTGTTTGA Coding sequence (CDS) from alignment at sc0000219_pilon:12250..15134+ >XLOC_041366 ID=XLOC_041366|Name=XLOC_041366|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1884bp|location=Sequence derived from alignment at sc0000219_pilon:12250..15134+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGCCACTGAACAACAACAGCCTGGTCAAGAAATGTGAAGTGGAAAC
TCAAAGACTTTTCCAATTGTTTCTGACCGTTGGAGAAGATTCGCACAAGT
TTCAATCCTCAGAAACTGATGAAGATGAGGCCACTGAACAACAACAGCCT
GGTCAAGAAATGTGAAGTGGAAACTCAAAGACTTTTCCAATTGTTTCTGA
CCGTTGGAGAAGATTCGCACAAGTTTCAATCCTCAGAAACTGATGAAGTT
CAATATTTCGTTCGTGAGAGGCCGTCGTCAGTTCGTTCATCCGGCTCCTT
TGGCAGTGCTTCAAACATCAGTTCACGAGGTCTTGATGATGCCTCGAAGT
TTCAAAATGCGTTCGACCATCGGAAGCAAAGTGATGGGATTTCCATACCC
AACAGGAGTGGTAGCTCACCCATGATAAACAGTATCGCTTATTCGCCAAA
CTTAGTATCCGATTCAGCGCGAACACCGCCCAATTCTTTTAACGCTTCTT
TCACTTCATGTACACCGCCCTCTTCCTCACCTTCCTTGAAACATGCCATC
GAAAGAAAACGACCAAGCTCGTCTGACTTCTCACGGTACAAGCGAACTGT
CGCGGAAGGTCCATCCGCCGCTGCCGCCACCTTTATACCTTTTCCAAGTG
AACAGCAACGGCCGCGCTCGAATACAGGTCCAAGTGAAGAAGTGTTGGCA
CAAACGGCACGAACCATTGCTGATATCGGTGATGATATTGAACAAGAATA
CGGAAACAAAATGACGTTCAATATTTCGTTCGTGAGAGGCCGTCGTCAGT
TCGTTCATCCGGCTCCTTTGGCAGTGCTTCAAACATCAGTTCACGAGGTC
TTGATGATGCCTCGAAGTTTCAAAATGCGTTCGACCATCGGAAGCAAAGT
GATGGGATTTCCATACCCAACAGGAGTGGTAGCTCACCCATGATAAACAG
TATCGCTTATTCGCCAAACTTAGTATCCGATTCAGCGCGAACACCGCCCA
ATTCTTTTAACGCTTCTTTCACTTCATGTACACCGCCCTCTTCCTCACCT
TCCTTGAAACATGCCATCGAAAGAAAACGACCAAGCTCGTCTGACTTCTC
ACGGTACAAGCGAACTGTCGCGGAAGGTCCATCCGCCGCTGCCGCCACCT
TTATACCTTTTCCAAGTGAACAGCAACGGCCGCGCTCGAATACAGGTCCA
AGTGAAGAAGTGTTGGCACAAACGGCACGAACCATTGCTGATATCGGTGA
TGATATTGAACAAGAATACGGAAACAAAATGACGAAATTAACAACGGATT
TGGTTGGCTTTCTTTCGGAGAATACGTCGATGTCTTACGAAGTGTTTGCA
GCGCACGTCAACGAGTTGGTTGGAGAGGACCGCAATTGGACCAACCTCGT
GTTCGTCATGCATCTTGGGAAGCGAGTGGTTCGCACAACTTCTTACGCAG
GCGAATATTTCGGAAGATTCCTCGGAAGTGCTTTTGGTGAAGAAATCGCT
CGTTCGGGAAGCACCAAATTAACAACGGATTTGGTTGGCTTTCTTTCGGA
GAATACGTCGATGTCTTACGAAGTGTTTGCAGCGCACGTCAACGAGTTGG
TTGGAGAGGACCGCAATTGGACCAACCTCGTGTTCGTCATGCATCTTGGG
AAGCGAGTGGTTCGCACAACTTCTTACGCAGGCGAATATTTCGGAAGATT
CCTCGGAAGTGCTTTTGGTGAAGAAATCGCTCGTTCGGGAAGCACCGATC
GATATGTTCGCGAgcattcgaaaaagaaatcctCTGCAGGGGAAGAAGAA
GGGTCAGCTGTTTGAGATCGATATGTTCGCGAgcattcgaaaaagaaatc
ctCTGCAGGGGAAGAAGAAGGGTCAGCTGTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000219_pilon | genome | sc0000219_pilon:12250..15134 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 874-942:2817 |
| Aaloc | 643-873:2141 |
| Aaloc | 127-642:1482 |
| Aaloc | 1-123:1 |
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