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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000176_pilon:658104..661776- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044235 ID=XLOC_044235|Name=XLOC_044235|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3673bp|location=Sequence derived from alignment at sc0000176_pilon:658104..661776- (Clytia hemisphaerica_ch_hm2_pilon)
GAAAAATATTCTTCGAGGATAAGAAGCAAAATGAAACAGCCGAATTATCC
GGTCGGGTATACTACGAAAAAGGTCTGCTATTTTTCGGCTGTATAAAGGT
CGTAATCATTCTTGAAATTTTCGGAGAGAGGGGTTTTTTACTTTTCATGA
TTTTCTTCTTTATTTTCTTTTTCTAGAGACCGTACGGCCTGATGGAGAAA
GAATTAGAAGGTAGGTTTTTGTTTCCAAGTTTTTGTTTTTTGTTTGAGAG
GATTTTCATATACGGCTACAATGCTGTTTGATACTGATTTCTTAATTCGT
CGTTTCTCAAAATTCAATTTCGGGTGAAAACCGTAATTTCAGCTCTTCCA
CTTTATGTCATCGGGTTTTTTAATTTGGGAGGGGTTTATCGGCTTTCAGG
CTATATTCTAAATCTTATTGTATCATTTTAAAACTTTTAGATCATGAGAT
CCTTAAGTCTTAAGTCTAATGTTAAAACTCAGAGTTAGAACTCTACTTTC
CCACCATCAGTTAAAGCACTTAAAAATCACTTGCTTTTTTGAAATTCTGC
CAAATATTATGATCTGCATTGTAGATAGAATATTTTACATATATATTTTA
CGTGGATAGTTCAATAATCAAGGACCTTTTAGCCAGTCTATAACATCATC
CACTGCTAGCCGGTTCGGAATATTTATTAACTGAACGGAGCATTGGCTAG
AGCGGGAAACCGAGAACCCTTTAATTTGTGGTGCTGAAATCGTAGACAAC
ATGGCAATCTCTTCTTGATTCAAATCCTAGTCATTACCTTTAAAATTAAA
CTTGCTAGCCTCCAGGGAAAGGTGTGACCTAGCTTTGAAACCTTTTTAAA
GTGCGCTAAAAGGATCATTGCATACACTAGATTGATGATTCCAAAAGAAC
GGTAGCAAAGATTTTCTTTATTATCAAAATTCAATACGATAGTAGACAAA
TTCATTTATTTTCTCTATTTTTAGAGTACCGCAAATATTTTTGGCAGCAG
GACGTTGACGGAGACGGTCAACTATCAAAGAATGAATTCAATAACATGTT
ACGTACAATGGGTTTGAATCTTACTCGTCAAGAAGTTGAAAATTTATTCG
CCAAAACTGACGTTGATAGTATGTATCCCAGCTGGAACACAACGTTGTTT
CAATGTTTATCTAACGTTAACGTCAACGTTAGATTAACGTTGAAACAACG
TTGTGTGCCAGCTATGTATTGATTCCTTTTTAGGGGGCTTTTTTACACCC
CCCTTCTCACAGACCCGGTGGGATTCTATCAGCTAGTGGGGTTAAAAATA
ACGGTCAAAAACTCGATAAGGATTGATATTCCCATGTTTTTTATGGCTGG
GGATTTAAATTCCATTGTTTTCTAGCCAGAAAATTCTGTGGGAATGGAAA
AAATAGCACAATATTTTACAATTATCGTATCTCCGTTCGCAGTTTGTAAT
AATGAACACTTAATGATTTTACTAGCGAGCACCTCACTAAAAACCGGGAT
TTTTCATCATCAAAGTTCCACTTTGCCGATTTTCGAAAAATAAAAGCCTT
TCAAGTGCTTTGACGCAAATTCGATTATTTTGATACTGCAGGAGCTTCGA
AAGTTATAAGTGACGTCAAAAAATCGAATGTTTAGAGCCCGAAAACCTTA
GCGAGCACCTCACTAAAAACCGGGATTTTTCATCTCGTTTCTTAGTGAGT
TCCACTTTGAAGATTTTCGAAAAATAGAAGCCTTTCAAGTGTTTTGACGC
AAATTCGATTATTTTGCTACTGCAAGGGCTTCAAAAGTTTAAAGTGACGT
CAAAAAATCGAATGTTTAGAGCCCGAAAACCCGGGCTCAAAACATTCGAA
AAAGTCGCAAAGTGGAATAGACGTTAATTGCGTAAAAAAACGCGGGTGAC
GTCTAGTATAGGCTAGAAAACCTGGGCTCAAAACATTCGAAAAAGTCACA
AAGTGGAATAGACGTTAGTTGCGTACAAAAACGCGGGTGACGTCTAGTAT
AGGCTATGATTGTATATGGTATAAAAAAAACGGGGAGGATTGGCATGTGT
CAGTCTCGTCGCAATCGTGACGGGATCTTCTAAATAGACACAAGACAAGG
ACAGGTCGATGACACTACTGCCTTGCCAAAGATGTTGTCCTCTTCTACTG
CCTTGCAATCATATTCTCTCTATAGAAGATATACAACTGTTGCTCTCTAA
AATAGACTGACGCACCAGTCAGGCTAACATATCATGCGGGAATAGTGAGC
GTAGTAGGAAATTCTGTCGATGAGAGGTGCGCTTCGCACGAAAGTGGACA
TCGGGCTTATCTGATATTCCGATGGCGCATTGGCGGCCGCCCACGCTAAA
GCTCTAAAGGAGCGGGCCAAAATTTTCCCGACCTTCAGAGCTTTAGCGTG
TCGGAAGAAAATTTCTCCATCGAGTACCAGATAAACATCGGGCTTAAGTT
AGATCGCTTCCAAATAGTTTTTGGGAAGATTTCGTGGGAATTTCCCTACT
TTCTCAATTCATACCCACCTATTTTAACCCGTTCTCATGCGCAGTTCCTA
TTTTACCAAAAACCCCACACAGCCCTCTAACATGGTTTAATTAATAGACT
ATTTCGCTAGTCTCTAAAGATGTCAACTTCCAAAAGTGTTAAAGGGACTG
AAAAAAATAGTGTTTAATGTACGCCACTTGTTCTCTCTTATCTACCTGCA
GAAAATTACAGGATCAGCTTCCATGAGTTCGCCGAAGCCTTCATTGCAAA
GAAACGGGAACATGTGAGTGGCGATCGGCTACGACGCGTCTTTCAAGAGG
CCGATCGTGACCGTGATGGTTACCTGACAACAGATGAGTGTTTGGCCGCT
TTAAAACAACTCGGTCACGTAATGGATGATAAAGGCATACGACGTGTGAT
GGGTTTGATGGATAAGAATAATGACGGAATGATAACGTTTCAAGGTACCT
TAGCATTTGTTTTCTTTTCATGTTACACATTTCTTTTAATAAAAACATCC
AAATGTTCTTAACTTTTTGATTTTTAAACCAAATATTATTCTGATTTTCA
GCATTTTGTGAAGATTTATATTTGATTTCTACAGTCTGTTTCATTAAGTT
TAAAGCCTGCAGGGTTAGAGTAGAATCTCTAACCTTTCCCAGGCAAAAAA
AAAAGTGAAGCCACTTATTTCCCATTCAGAATGTGCCTGGAACGCGTCGC
AATCATGACGACAGATTGTATCTAGTGGTTCCTTTGTTTTTGAGGACTAC
ATTTTTTGAAATCTAGATCTTAATTTCAATCCAGCGTTTGTGTAAAAACC
ACGCGTGGGCGTTCTGGATTGGAAATAAACGACTTCATTTCCTATCCAGG
AGTCTTGAGCCTAGCCCCTCGGGCTTAGAATAAGTCAATGGTTTGTACCT
CTAAAGAATCCTGCATTATAACACGCATGCGTAATTTGTCGTTCTTTAAA
CATATGTAGTTAAACTGCGTGATAATCAAAGAGGAGTAAATTCGTACTTA
GGGGTGGACAAACTAACCGGGTCGGGGTTGGGTTATGGACGGCGAAATAT
GTCATATTTTGTGAAATATGTTGTTCTTTTTGTCTATTTTTAGCCAATGT
AGGATTCTTTAAATTAAGCCTCTCATAAATCTTGTTTTCTTTTGTTTCAG
AATTCTGCAAGTTCATGGCTTAG Coding sequence (CDS) from alignment at sc0000176_pilon:658104..661776- >XLOC_044235 ID=XLOC_044235|Name=XLOC_044235|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1032bp|location=Sequence derived from alignment at sc0000176_pilon:658104..661776- (Clytia hemisphaerica_ch_hm2_pilon)
GAAAAATATTCTTCGAGGATAAGAAGCAAAATGAAACAGCCGAATTATCC
GGTCGGGTATACTACGAAAAAGGAAAAATATTCTTCGAGGATAAGAAGCA
AAATGAAACAGCCGAATTATCCGGTCGGGTATACTACGAAAAAGAGACCG
TACGGCCTGATGGAGAAAGAATTAGAAGAGACCGTACGGCCTGATGGAGA
AAGAATTAGAAGAGTACCGCAAATATTTTTGGCAGCAGGACGTTGACGGA
GACGGTCAACTATCAAAGAATGAATTCAATAACATGTTACGTACAATGGG
TTTGAATCTTACTCGTCAAGAAGTTGAAAATTTATTCGCCAAAACTGACG
TTGATAAGTACCGCAAATATTTTTGGCAGCAGGACGTTGACGGAGACGGT
CAACTATCAAAGAATGAATTCAATAACATGTTACGTACAATGGGTTTGAA
TCTTACTCGTCAAGAAGTTGAAAATTTATTCGCCAAAACTGACGTTGATA
AAAATTACAGGATCAGCTTCCATGAGTTCGCCGAAGCCTTCATTGCAAAG
AAACGGGAACATGTGAGTGGCGATCGGCTACGACGCGTCTTTCAAGAGGC
CGATCGTGACCGTGATGGTTACCTGACAACAGATGAGTGTTTGGCCGCTT
TAAAACAACTCGGTCACGTAATGGATGATAAAGGCATACGACGTGTGATG
GGTTTGATGGATAAGAATAATGACGGAATGATAACGTTTCAAGAAAATTA
CAGGATCAGCTTCCATGAGTTCGCCGAAGCCTTCATTGCAAAGAAACGGG
AACATGTGAGTGGCGATCGGCTACGACGCGTCTTTCAAGAGGCCGATCGT
GACCGTGATGGTTACCTGACAACAGATGAGTGTTTGGCCGCTTTAAAACA
ACTCGGTCACGTAATGGATGATAAAGGCATACGACGTGTGATGGGTTTGA
TGGATAAGAATAATGACGGAATGATAACGTTTCAAGAATTCTGCAAGTTC
ATGGCTTAGAATTCTGCAAGTTCATGGCTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000176_pilon | genome | sc0000176_pilon:658104..661776 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 496-516:22 |
| Aaloc | 253-492:971 |
| Aaloc | 109-249:2698 |
| Aaloc | 73-105:3498 |
| Aaloc | 1-72:3674 |
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