XLOC_038267 (gene) - C. hemisphaerica

Overview
NameXLOC_038267
Unique NameXLOC_038267
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_350:24696..32976-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038267 ID=XLOC_038267|Name=XLOC_038267|organism=Clytia hemisphaerica|type=gene|length=8281bp|location=Sequence derived from alignment at scaffold_350:24696..32976- (Clytia hemisphaerica)
AATAGAAGGTTATTCATTACATAGAGGTCAATTGACGCACGAAGGAACAT GCTGAGGTGTTTATCCCTTATACAAGAAAAGGAGAACGGTCAAGAAGAAA TGAAAATTGCGAGTTTTTGATGAGCAGAAAGATGAAGAGATGTAGCAAGA AATTATTGGGTGTACTTGGTGTTGCATTGTTTTATTATTTTGTCGGTGTC GTCAAAGCAGATGGTAAGTACCTTCTTGGCCCTTTTTATGCCGGCACTAA TTTAACGCCGGCCCTTATTACGCAACAGCCTAATTTTAGGCTTACGCCAA TTAGGGCCGTTGATAACGCCAAAATTTGTAAAAATGGCTACTTATGCTTC AAATTAGTAAATAATGACTAAAATTCACATTAAAATGTCATTTTCAGTAG TAAACTGTTGAAAATTCAATCGAAAATCACTGATTTTTGAATATATTAAA TATTTCACTGAAGTTTTAAATATGGAGTAAAACAATGGATAATTTTCGTC TTCGAATCAAACCTAAAATTCTTTAAATGAGAACTAATGATAAAAATTTA ACGCCGCTTTTAAGTTAAAATTGCAAAATCTTGGCCCTTTCTACGCCGGT CCTTTTAACGCCGGCCCTTATTACGCCACAAGCCCAAAAATAATGCTAAT GAGGGCCGGTGTAAAAAGAGCTGATAAGGTAGTAGTAAAAATTACAAAGA ACTTTGTTCAAGCTTTTAGCGATTTCTAGCACACAGATTTTAAACTGGCA TGATTCGAAAATGCAGCATTTATGATTAAGAGAATTAAATTTTTGCTGAT TTTACAATACCTGAAGATAACTCTGAAGGGAGCTTGATGGATGCATAAGT AAAAGGGATAAGTTTCAGTTCCTACATAAAGGAAAAAATCATTGAAAACT TACGATATTGACTCCATTGAGGTCCACGAAGTTTAGTTCTTCCGAATCAC ATTTCGTCTTTGGTCGCTGCGAGCTTTTATCCACGGATGTTTGAAAGCTT TAATATAAAAATGTTGAAAGTTTATATCATGTATCAAATTCAAATATTAT TTGCATTTAGCTGAAATACATCGCAAAGCAATGCGAAACGTCCGTCAAAT AGAGGTTGAGAATGGGATGCACTTATATTGCGAAGACAACAAACTATTAA CCATCCTTCAGATCAACATCGCAATAGCACCTGATGACGTCATTACGTTA CAAAATTCTACGTGTCCTATTGGTCGAAATGAAACACACGTGACTGCACA GACCTCATTTTTAGACTGTGGAACAACTTTTGAGGAAACAGAGGAAGAGT TTATTTTCACGAACGTTTTGACTGTCACGCCGAAAGCACCTGAAAATGCG ATCATTTTGAGGAGACATCAAGTTCCAAGAGAATATGAATTGAGATGTTC ATTCGTGAAATCACCAAGAACAACTTTAGATACTGGCATAATCCATATCT TTGGTAAGAGTATTCTAAATTTATTTTGTAGCTTTCAAAAAGACCCAGAG GGGGGGGGGACTTAGGCAAGTGGAGGGTACGGGCATGTGCCGCCCTTAAG GGTGCCTGTAAGGGTTGGAAAAACTAGAAAATTAAATTTCAGTCCCACTA AGGGTCGGAAAAATAGGAAAATTCCAACTTTTTACTCCTTAAAAGATCAA AATTTGGTCAAATTAGTCCCAATAAGGGTCGTAAAAATCGCAAAATTTTC CAATTGTTCCGCTTTTTTAGTCCCGCTAAGGGTACGAGGGTCGAAAGTCC GTCGGCACGTACCCTTCAGCTCGCAACCCTAGTACCCCCCCCCCTATCCC CGAGCAAGAAGAACATCTTAAATGTGCTGATAGATACACTTTAAGGACGG AGCCCTATGATTAAAGTACAGTGAAAGATCTTTCTTTTCAAACTTTCAAA AAGATGCTATTGAGTTGAATTCGAAACTCACCAATTAAGAATTTGGTTTC TCGAGGAAAGGAGATTCATCCATGGTAAAATCAAACAGTCGTTTTTATAT CTGAATAACTGAAAAAGAAAAATGAAAATAAGGTTCCACTCTTTATTACA ACAGAGGACGTCTGCGCAAGTCAAGCCAACCCATGCAACAAGACGACTTC TTATTGCGCTGCTTCACAAATCAATTTCGAATGTCAATGCAGAGATGGAT TCACAAAACAATCAGGGGGTCAACAATGTCTAGACTACTGTGAGGCTGGA CAAAATTACTGCGATGAAGCAACAACAGAATGTGTACCGACCCCCGGGAT AGGACCGAATTATAGATGTGATTGTTTGGATAGCCAAAAGGTGAAACAAG CGTACTATCGATGCGCTGGTCCAGAAGCTTCAAGGGACGAACAAAAGTCG ACTGAAGGTAAATAAAATAAAACAAGTGATACTTTTATGGATCTACCTGG TTATGCATTTAACAAATATAATTGATATCTACGTGAGCATGACCGTTAAA CAATCATTCAGAACAGAAATAGTGACGATCTATTAAAATTAGTCGTTTGT TTCTTATAAAAAAAACGTCTAGAAACCAAAAGTTCATGCTCTTGAAATAA TCTTTCATATTCAAGACTTTGTGAGCAAAAAAAAACATCTTTCTCATTAA AAAATTGAGTAATTTGACTAAGAACATTGGTGTATGCTTATTAATAGTGA TTCTTATAAATAAAGATGCGTTTTTTTAGCTGAAAAATTCTTTTTTTACA AAAATCTGCTCGAGCCATCTTTTATTTACTTTCATGTAAAAAATCAGAAA AAAACAATGATCCAATGTTTCAAAAAACCCTTTTTTTAGCCGTTTTTTGG CCCAAATTTGCCCAAAAACATTTTTTTTCGAAAATCGAGCTCCGTCACAT TTAAGGGTTTAAAGTTATGCATCTTTGTGCAAAAAATCATAAAGAATGAA AGAGCTAATCTCAAGAAAAGCTAATACCTAAGTAATTGATAATNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTA TAAAAAAATACCGAATTCGGCCAGTTTTTCTATAAAAACACGCCAAGCAA CCAAAATTTCATGTCTAAACACACATACTCTCTAAAAGTAAGCCCTCATG ATAAAAAAAAACATCTATCTCGTAAAAAAATTGAGTAATTCGACTAAGAA CATTGATGTATGCTTATTAATAGTGATTCTTATAGATAAACATGCGTTTT TTGAGCCAACAAATTTTTTTTGCAAAAATCTGCTTAGCCATCTTTTACCT ATCATGGTACCCTACTTTCATACAAAAAATCAGAAAAAATTAATGACCCA ATTTTTCACAGTGTCTAAAAAACCCGTTTTTTAGCCGTTTTCTGGCCCAA ATTAGCCCAAAGATTTTTTTTTTCGAAAATCGGGCTCCGTCACATTTTGG CCAACACCATTTTGCACCTTTGTACCAAAAATCAAAAGATTCCTATGATT CAATCCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNACGAACGGACGAACAAACACAGGTTAATTTATA GGACCTCCACCGGGGTAGGTCCAACAATAAGTCCCGTGATAAACACTTAT TTTATAAGAGTAATTATATAAGAAAACAAGGCTGAAAATTGGCCAAAACC TAAGAACAAATTAAGAACAATCCTAAGCCTAAGATTTCAGAAAAATTACT TAGAAAGTACTGATTTTAACAGATTTTAAACCCATTTTAAGTTTTTAAGT AATACAACTAAGCGTATTAAGAACATCGTAAGAACTGTTCCATTAAATTT CCATACATACCTTTTTAAGGCAAAAAAATATTTCTTTAAATGTGGTAATA CCCCCTGGAAAATGGCAAAATTTGCAAAAGAAGCCTTGGAAAGATTATTT TCATTCCCTAAAAGTAAGGGTGGATGAACAAAAATTAGTCTATCACCCCC TGGAAATTTTTAGAATAACCTTTGACCTACTGGAAAATGAAAAAAACCCC CTGTAAATTCTTCTCCGATTACCCCCTGGAAATGTTCGTCCACCCCCCTG TATGGGTATAAAATGGAATGGCACATTTATGCCAGGATGTTAAGAACAGT ACAGTCTGAACCAAAATTTATTGGTTTTTATAAAAAAAAGGTGTACCTCA TATCTCTTAAAAAACTGGAAAATTCAATACCATACAATCATGGTTCAAAG TCTCATGAAGGGTATTTTTATTAATAAGAGTTAATAAGTGATAAAGTACC TCGATCGATCAACTGTAACATCAACATTTCACATTACGTCATTACACTGC CAAGGTCGATACATTTTTATTTTATTTTTCTGAAATATAAAGACAATAGA AAAATAATTTAGATTATGAATTTCAAACTATAGACGGTTTATCTTGTTAA AAATATGTAGCGGTAGCGCTATCAGTACAGAGTTGTCTGAGGCTACATGT GTATCTACCTCCAGTACTGAGAAAAAGACCATTGAGCTTTAACTTGATTT TTTAAATTGATTAATTTCAGGAACGAAAGTTTGGATTTTTATCGTAGTGG GATTAATTTTGTTGTTGATCGTGGCCATCAGTGTGCTTGTATACTTCAAA TATCGTAGACGAAATTACGACGTCCCTCATGATGTATGAGAATAAAACAC TCAGTATTTCCCTTTATATCAGGGAAAATGAAGTTTAAAAAATCAAACAT TGAATTTCAAGGTACATCGATAATTTTTTATATAGATAATAAAAAATGAG CCATAGAAGGGGATTTTAGTGATATTCTAAACTATCAACCATTCTCTACC ATGCTTTTACTAAGAAAGTCTTATAGATAATGATTGGATTTGCACAGAAT CCAAGAAAAAAACCCATTTCTTCTAATTCATTAATCCCTTTTGTTCTAAG TGACGTGTACGTGTGTGGCATCGTANATTTCTTCTAATTCATTAATTTCT TCTAATTCATTAATCCCTTTTGTTCTAAGTGACGTGTACGTGTGTGGCAT CGTAGAAAATAGTCGGCAAAAAGTGACGAAGTCTTCCCCCGACAAAAGTC TCCCCGGACGAAAAGATTTACCCGACTGAGTTTTCCTCCTTCTACGGGAC CTACTGTAGCTCAAATTATTTAAGTTCAGATATTTAATACTGTAAATAGT TTTGTACATAAAATGATGTAGAAATAACCAAGTATTTTAGGTTTGTAAGA GTATTATATAAAATATTTTCTTCAATTTGATCACTTTAAAAATGATCCTC ATGTAATATATACCTTCCTTCCTCACGTAAAAATGACTAATTCGAAAAAA AAACTCCCTAAAGAACAATTATACATGCTATAATCACATTATCATAATTT ATCATATTTTAGAAAAATAAAAAACGCATAATACTATCTCTCGAACGAAC TGTGAAAACATCTTAGTTATCAAACGTATCCCTGGTTTCCCCCTCCTCAA TCAGTGGGGGGTGGTACTAAAATCTCGTAAGTACTAAAACATCACGAAAA TTTGTGAAAAAGATTAATAAAATCATGAAAATTACTAATTTTAGTACCAA TTTACTAAAAAAAATTCAAATTTTATTCTGGATACCACCTTTTTGGTATT TTAGTACCCATTGTTCAAATTGTACTAAAAGGATTTTTAAGTTTTTTGGG TATACCACCACGTCACTAAACATCCTGATGTCCTAGATTTTAGTATCAAC TCCCCTACTTCCATTCCAATTTTATAGCAAAAACCCACAGTTAAAGGTTT TTTCAATTTTGAACTTATTCAACTTGTCATTTAAAGATGCCCCACAATGC AGCACACAATCAGTTCCAAGGATTTACCCTCTGCAAATAGATAGCTTTAA AGTTGAGGACGCCAAACTGCTTTGAATTGAATTTCAATACACAACCTGGA TTTTTGACAATTTTTGAGGTAGAACCCGTTGGAGTCTTATCCAATTTTCA AAATGTCTGCCCATTTCAAGAGATTCCACTTAAACCCTTGGGTTATCCAG GTTTAATTAAAGGTATCCCCAGGGCCATAAATATGACCTCCTCGACAGGG TGGGTAAATTTTCTGGAATACCCAGTTGAATGGCCTTAGTTGAATGGCCT TAGTTTGCTTCCTTTATTCGAAATAATTTTATTTAAACCAACACTTTGTA AAAAAAATATCGCATGCAAATATTAATAAGGGTAAAAATTGTAAAATCAT TATTTTGTTTAGTAAAGTAAGACCTTAAAATTCAGCTCCAGTCAATTATA TAAATAAATTCTTGTGATAATTAATTAATAAATGCGATAACACTCACCTG AGCTCCAAGGATAATAACAACAGCAATAATTTCATCAAAAAATATATGCA CCAATATATATGTTGGTTATTTTAAATTTCACTTGTATAAAAACCTCGTA TAAAAAGAGACACTCTTCTAACTATAAGGACCTCGGCGTGGCACCGTTCC CCGGCCCTTCCGACACTCATTGTATATCATTTTCAAAACAATAACATGAA AACTAACGATGAGCACCACAACGGAGATCCAGAATTTAGGCGAAAGCTGA TGATGGTGAGCAGTCGCTTTGATCTCCTTCGCAGAATGTATTGCTTTTCG CATAAAGTCTGAATGGTGGATCTTCTCCAAAAGAGTCCGGTTGCTGGAGA TGTAAAAAAGAGGAGTCACCGGATCTGTTGGGTGAATCACGAATTTTAGT CTGGAGCTGCCCAACTCTACAACGTGCTCACACGCACTACCACAACCGAA AATCTTCGGCGAATGTTTACCATTATTCATAACATAAATTTGATACGGTT CTGTTTTGATATTGGTCACTAAAACTTTCAGATCAAATTGATCTTGTGAA TGGAAATAGTCTAAGGATACATGTCGTAATGAAATATTGGTACGCAAGTT CAAAGGGTTGAGAGCCATTTGTAGTTGCTTGTTGTGATAATGTAGGCCTA CGATAGTCAATACCATTAATTGAGGTAATGAAAAAGCAGTGAGAGAAGAT ATAGGGCAATTATTTCGTGTGAAGAAATCCTCCCATAGTTGCATCAATGA ACTTAAAGAGCTCAAACTAGTCGGTACCACCCAATGTTTTGGATAGTGTA AAGTTGGTGGCCCTGTGTAACAATTGACGGATTTGGTTGATTTTTNGAAT AAATGCGATAACACTCACCTGAGCTCCAAGGATAATAACAACAGCAATAA TTAATCATCAAAAAATATATGCACCAATATATATATGTTGGTTATTTTAA ATTTCACTTGTATAAAAACCTTGTATAAAAAGAGACACTCTTCTAACTAT AAGGACCTCGGCGTGGCACCGTTCCCCGGCCCTTCCGACACTCATTGTAT ATCATTTTCAAAACAATAACATGAAAACTAACGATGAGCACCACAACGGA GATCCAGAATTTAGGCGAAAGCTGATGATGGTGAGCAGTCGCTTTGATCT CCTTCGCAGAATGTATTGCTTTTCGCATAAAGTCTGAATGGTGGATCTTC TCCAAAAGAGTCCGGTTGCTGGAGATGTAAAAAAGAGGAGTCACCGGATC TGTTGGGTGAATCACGAATTTTAGTCTGGAGCTGCCCAACTCTACAACGT GCTCACACGCACTACCACAACCGAAAATCTTCGGCGAATGTTTACCATTA TTCATAACATAAATTTGATACGGTTCTGTTTTGATATTGGTCACTAAAAC TTTCAGATCGAATTGATCTTGTGAATGGAAATAGTCTAAGGATACATGTC GTAATGAAATATTGGTACGCAAGTTCAAAGGGTTGAGAGCCATTTGTAGC TGCTTGTTGTGATAATGTAGGCCTACGATAGTCAATACCATTAATTGAGG TAATGAAAAAGCAGTGAGAGAAGATATAGGGCAATTATTCCGTGTAAAGA AATCCTCCCATAGTTGCATCAATGAACTTAAAGAGCTCAAACTAGTCGGT ACCACCCAATGTTTTGGATAGTGTAAAGTTGGTGGCCCTGTGTAACAATT GACGGATTTGGTTGATTTTTTGGTTGAGTTACCACTGTGTGTGGTGTATA AGTAGTATTGAGTCAAGTTGACGTGTAATGGTGATGGCGAATTTGGGTCA GAATCTGATGAAATTGAAATACCAGTCTATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060959TCONS_00060959Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060959-proteinTCONS_00060959-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_350supercontigscaffold_350:24696..32976 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.13 0.13 0.06 0.07 0.09 0.13 0.47 0.3 0.18 0.32 0.69 0.53 0.38 0.22 4.14 5.46 0.42 0.93 9.63 9.7 1.36 1.47 3.02 2.58 0.56 0.74 0 0.03