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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000029_pilon:1793961..1799488+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035307 ID=XLOC_035307|Name=XLOC_035307|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5528bp|location=Sequence derived from alignment at sc0000029_pilon:1793961..1799488+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTACTGGTAATATCATTCATTGCTTGTACAATCAGTACCATTCAATC
GTATCCAACCAAGCAAAGTCATGTTCCATATTTTCACAAAGGGCGTCCAA
AAGGTGGGTTTCTTGGTGACCCTTACATTGATCCAAGACAAAACTTCAAA
GCTGCTGAACCACAATGGTACACACAACAATTAAACCATTTCGATGATCA
AGACACTCGAACATGGCAGCAAAAGTATTATGTCAATGCCACTCAATTTG
GTGAAAATGGACCAGTTTTTCTAATGATTGGAGGTGAAGGACCACTCAGT
GCTCGTTGGGTTGGTGTTGGCTCAATGGTGGAAATGGCCAAAGAACACAA
GGCACTTGTATTGGCTTTAGAACATCGATATTATGGTGACAGTCATCCAA
CAAGGTGTGTTGTAGATTTGTGTTCAATTTATATCTTTGACCTTAGTTAT
CCTGATAAAAGGATTTCGCAAATattgcaaaatcaaaatatggTTATTGC
AATTTTTGGGCCTATCTTCAACTCTTTTTGTTATACCTTTTGCTGATTTT
GCTTTAAAGAAAATCCAAGTTATAAGTTATTAGTGTATAGGTGCTAGTCT
AAGTTTATAACCTAAAGAATGTACTGTATTTATTTAATCATTCTTTAAAA
CAAAtatattgtttgttttgaaataatttatatGGGGCATTTTGTGCCTT
TAATTATAAGTagaattatcatttttgttttagtGACACTAGTGTTGAAA
ATCTGAAATATTTGAGCAGCGAGCAAGCTTTGGCTGACTTGGCGACTTTC
AGAGCATCTATGGTGGAACAGTTTGCATTGAGTGATAAAAACAAATGGAT
TTCTTTTGGTGGTTCATATCCTGGTGCTTTGTCAGCATGGTTCAGATATA
AATATCCACATCTGGTTCACGGTGAGTTTTATTTCGTTGATTTTTAGTAG
GGTTTGTAAAAGCATAATGAAGGACCAACCAATTATGCATCTTCTTTTAT
AAGTGCTCCAAACCCATAGTATATGCCTACTAAGCGTTACATCATCATCT
TTTAAGTATTCATTTGGGTAGTCAAAGTGTTTCCAACAACCATTGAGGAA
ATCATCTGATTTGAATTGCAGAGATCAAGCTTAccaagaaaaatatatac
attaaaGATATTATATGCGATAACTATAGAAAGCAATCCTATCTAGGGCT
GAAAgtctaacaaaaaattcaaaatacccAACCTGAGGAATGTGTAGGGA
TTTAATCAGAATATTTGTGATTAATTGTTAGCTATGATCAAAACTTTCaa
caatcctttgttttatttcattCTTTTCTTGTTAATAAAGGTGCCGTTGC
AAGTAGTGCACCCATCAATGCTCAAACAGATTTCCCTGAATATTTGGAAG
TGTCTACAGATTCTTTGGGCACACAAGAATGTAAAGACAGTGTACAAGCG
GCAACTACCAGTGtggaaaaatatgttcaaaCAGAAGCTGGGCGGAAAAT
GCTGACTGATCTCTTCCAGTACGTAAGACAAAGGCTGCATTCTAGTAACC
AATTTCCATaagcggttttagaccatgtcgaacttatcagaggaagagat
ttgtaattgtaatttcattgttttttaacgagcgttgcactcattcgcat
gtttccgacgtacttgctctattgtcttaaatccgccagtatTTCCATTA
CTTTATCAATTACGATCAGTATATCTAACATTTCGAGTTTCGTTCCAGCA
TCATGCTTTTTCTATGgtaatttgagaattttatatttttagagaaaaag
ttACGTTACGTAACGCTCTTTTTGACTGGATACCACATCGATTAATTGCA
CCCACGAGAGGTTCAATCAGGCATAGAATAgttatagatagatagagtcg
atattttacgtggataacCCAGTagtctaggacttttagacggtcattcg
attgttttcacggggtccacggccagccggctccgttatctatgaactga
acggaacattggaatgGGTGGGGATTCGAACTCGAACTGCGAATCCTTGG
TTTGAGATGCTAACGcttttgaccacttggccatcgctccatAAAGCTCC
ATAGTTCTCTGATCGTGGCACAAAATTCAAGAAGTGTACCTTTTAGTAGT
TGATCTCTATATTATAATGATAGTCTTTTCTTATGTTTACAGTCTTTGTG
AGCCTCTGAGTGACGATCCAAATGACATTTCTCAATTCACTTCATCAATG
GCCGGTAATTTCTTTGGTGTCATCCAATACAATAAAGACAATCGTGCTTT
CGAGGTGGGTACAAAAATTAGTGTATGATGATTGCTAATGATACAGTCCC
CAAGATAAGGGAACCAATGTCTTAGTTTGAATTGAAGGCAGATTCGAACA
ACATGTTCGAACTATATGGAGTAGAACGTATATTCAGTGGACACGAAGTT
TTACGTAGAGGTATTTGGGATAtgcgccattgcaatgtcttctgacatta
catcacttTTATAACACCAGATTGATTGCaacatattcatgatatgcacc
actgcaatgtcttctgtaTTACATCAAGGACCCAATAGCTGagtggttgt
aagtgacgtaaaattagTCAATaagtcactttcaaccaatcagctgtgga
agacattgcaattgcAAATATCACGAAATGAGTGACCAGAAAAGATGCAG
AATTTCGTGAATtcgttgcagtggtgcatatcgtGGCCTTAGtgtaattt
cattgtttgaGAAATATATAATATACATCGATCAGAATGCACTAATTAAT
TCACTAATTTTTACATCAATATCTTTTGAATTGAATCTTCGCCATAGGGA
GCCACAGGTACCAACATCACAGTGGACACATTATGTAACATCATGTCCTT
ACCAATATTTGGTGATGAGATGCATCGCTATGCCAAGATCAACGAAATCA
TGATGGAAACATACAAACAAACTTGCATCTCACccaattataaaaaattc
attGAAGAAATGAAGGTCATCGATTGGAAATCTGTGGAAGGAGGTGACAC
TATTTGTGAGATTTTAATAAAAGGGGGAGACCTAATTTCCGGGGAGGATG
GAAAACCCTTCTGAAATGGATGGAAAAccacttctgaaaacccaaaaata
ggTAAATATTAGGccaaaatcaggctatttagaggaaaataaggggcctt
ctctttaagacagctgaaaatattaaaaaaatttataaacggggggaggt
cctaataaggtccggggggttggaaaattttcgaaaaatttacaAggggg
ggggTGTTTGGGTGTTTATTTGGAATCTAAGAGTACATTAAACATTGAAT
TGATATAACTGAAAATCCGGTTCAAAACAACACGAGATGATGAAGCTTAA
TTgatgttttaaactttttgttcacaGGTCGTCAATGGACATATCAAACT
TGCACCGAGTTTGGTTATTACCAATCATCGGACAGCAAATCACAAGTCTA
TGGCACAACATTCCCTTTGAGGTAAGATTGATAAGGCTCCTTGGCCAGTT
TGCAGCATTCTTGGCTTTTCAGATTAGCTTTAAATGATTTGAGAgggact
aaattttttttttaattctgaaaaagaCACATGAGCGCTGACACTCCTTT
CTATGACTCTCTCTTTAGCTATTCATATTATTCTGAACTTTTACACCCct
tgccaaaataaattcccttaGTATGTTTAATTTCAGCCCTGGGAAAGATT
TAGTGAGGTAAAGTCAATTGTTAAAGCTTCTCAATCTCGAAGCCGTACCC
AGAGCAATTTCCaccatttattttatttttctggtGAACGTAAGTGCAAT
CGTAAGCAATATCAAAATCATAAGAAAATAACTGGGTATGAATTCCGTAG
ACTAATTTTTCTCTCGTGTTCACTTTATCTAGTTTTTGGACGAAACAATG
TGTGGATATTTTTGGCGCCAATTTCAACGAGACGAGTATCAACCGAGCTG
TTGATTGGACCAATGATAATTACGGTGGCTACAATATGAACCAACCAAgg
gtatttcttttaaaatctttaacgatttggaaaattgatttgaaagCTAT
AGAAATGGGACAAGTTGGAGTTTTTGCAAGCTCTTATTttatttggttgg
tcgttaacctgtaataatgaattaaaaaacaattttgcgtCAAATCCAGA
TTATATCATGGATATTGATAAATGTTTTCCCGTTACAGCCATTTTTAAGC
CATAGAAAATCATATACAACACTAAAAATCCATTTAGTTCTCCGAACtat
ttttcattgcattgtGTTGACTGATATTCTCTAGAACGAaattttggaac
taattttaaTCTCACTAAGAATTATAAACATGCTCAAATTATTGAGTATC
ACCGATACCtctcttttttttcagattgtCTTTCCGAACGGTTCAATAGA
TCCTTGGCATGCGTTGAGTTTCACCGATGATCATAAAGACATGATCGCTG
TTTTCATTAAAGGTATGAAGTTAAAATCATTAGTTAAATAGTTTGAtgaa
aaagatttgttttcGATGACataaatacactcttctcgagatgcataaat
ttattgttgtcctcattttcaaacagatttcattgctatgaaattataca
tttaaaccaatttaaattcccagaaggcaaacattaactgtgaaacaaaa
agtacttgaaattcaaaatgtctcatgagatGTAAACAAACACAATTATC
actgtgaatatgtaattttatagcaatgaaatatgtttgaaaacgagtac
aacaataaatttatgcatctcgagaagagtgtatttatGAATAAGAATAT
CTGCAGTGAGACGGATTAAGAATGCCTCCTCAGCAACCTTGCGCTGGaaa
actttctaaatttcttggcaaaattcgaacctacatgttttttttataag
cataacgcttataagcatataaaggctcagatttgtagaattcctaagca
taacatgagcatatatgtcagcctaaaatatttttcaagtggtaattttt
atctgtttaaaaaggtttggtagaggtcaagtaaaaaataagacattcca
cggctagctaacattccactgctcccaaaatctgaacaaacttttacaaa
atttctgaaatttcataaaaaacttggctcggggtgaaccataagcatga
ttcttaagcatataataagcataaactatgcctggatgctttgagaactt
aagcatacacgagcctggccaaggggcatacacttgcttataaaaaaaaa
catgtaccagAAATATTTGTTCTTAGATTTAGTTGTAAAAGTGCGATCTC
CACCACACGAGTTGTTTTGGTTCATACaggttttaaaacaaattttcttt
ttcttgtttctaTAGGAACGGCTCACTGTGCTAACATGTATCCTAGCTCG
GAGGACGACTCACAAGAATTACAAGATGCTCGCCAAAAGATTCATGACTT
GGTTGGCAAATGGTTGCAAGAAGAATGA Coding sequence (CDS) from alignment at sc0000029_pilon:1793961..1799488+ >XLOC_035307 ID=XLOC_035307|Name=XLOC_035307|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2982bp|location=Sequence derived from alignment at sc0000029_pilon:1793961..1799488+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTACTGGTAATATCATTCATTGCTTGTACAATCAGTACCATTCAATC
GTATCCAACCAAGCAAAGTCATGTTCCATATTTTCACAAAGGGCGTCCAA
AAGGTGGGTTTCTTGGTGACCCTTACATTGATCCAAGACAAAACTTCAAA
GCTGCTGAACCACAATGGTACACACAACAATTAAACCATTTCGATGATCA
AGACACTCGAACATGGCAGCAAAAGTATTATGTCAATGCCACTCAATTTG
GTGAAAATGGACCAGTTTTTCTAATGATTGGAGGTGAAGGACCACTCAGT
GCTCGTTGGGTTGGTGTTGGCTCAATGGTGGAAATGGCCAAAGAACACAA
GGCACTTGTATTGGCTTTAGAACATCGATATTATGGTGACAGTCATCCAA
CAAGATGTTACTGGTAATATCATTCATTGCTTGTACAATCAGTACCATTC
AATCGTATCCAACCAAGCAAAGTCATGTTCCATATTTTCACAAAGGGCGT
CCAAAAGGTGGGTTTCTTGGTGACCCTTACATTGATCCAAGACAAAACTT
CAAAGCTGCTGAACCACAATGGTACACACAACAATTAAACCATTTCGATG
ATCAAGACACTCGAACATGGCAGCAAAAGTATTATGTCAATGCCACTCAA
TTTGGTGAAAATGGACCAGTTTTTCTAATGATTGGAGGTGAAGGACCACT
CAGTGCTCGTTGGGTTGGTGTTGGCTCAATGGTGGAAATGGCCAAAGAAC
ACAAGGCACTTGTATTGGCTTTAGAACATCGATATTATGGTGACAGTCAT
CCAACAAGtGACACTAGTGTTGAAAATCTGAAATATTTGAGCAGCGAGCA
AGCTTTGGCTGACTTGGCGACTTTCAGAGCATCTATGGTGGAACAGTTTG
CATTGAGTGATAAAAACAAATGGATTTCTTTTGGTGGTTCATATCCTGGT
GCTTTGTCAGCATGGTTCAGATATAAATATCCACATCTGGTTCACGtGAC
ACTAGTGTTGAAAATCTGAAATATTTGAGCAGCGAGCAAGCTTTGGCTGA
CTTGGCGACTTTCAGAGCATCTATGGTGGAACAGTTTGCATTGAGTGATA
AAAACAAATGGATTTCTTTTGGTGGTTCATATCCTGGTGCTTTGTCAGCA
TGGTTCAGATATAAATATCCACATCTGGTTCACGGTGCCGTTGCAAGTAG
TGCACCCATCAATGCTCAAACAGATTTCCCTGAATATTTGGAAGTGTCTA
CAGATTCTTTGGGCACACAAGAATGTAAAGACAGTGTACAAGCGGCAACT
ACCAGTGtggaaaaatatgttcaaaCAGAAGCTGGGCGGAAAATGCTGAC
TGATCTCTTCCAGTGCCGTTGCAAGTAGTGCACCCATCAATGCTCAAACA
GATTTCCCTGAATATTTGGAAGTGTCTACAGATTCTTTGGGCACACAAGA
ATGTAAAGACAGTGTACAAGCGGCAACTACCAGTGtggaaaaatatgttc
aaaCAGAAGCTGGGCGGAAAATGCTGACTGATCTCTTCCATCTTTGTGAG
CCTCTGAGTGACGATCCAAATGACATTTCTCAATTCACTTCATCAATGGC
CGGTAATTTCTTTGGTGTCATCCAATACAATAAAGACAATCGTGCTTTCG
AGTCTTTGTGAGCCTCTGAGTGACGATCCAAATGACATTTCTCAATTCAC
TTCATCAATGGCCGGTAATTTCTTTGGTGTCATCCAATACAATAAAGACA
ATCGTGCTTTCGAGGGAGCCACAGGTACCAACATCACAGTGGACACATTA
TGTAACATCATGTCCTTACCAATATTTGGTGATGAGATGCATCGCTATGC
CAAGATCAACGAAATCATGATGGAAACATACAAACAAACTTGCATCTCAC
ccaattataaaaaattcattGAAGAAATGAAGGTCATCGATTGGAAATCT
GTGGAAGGAGGGAGCCACAGGTACCAACATCACAGTGGACACATTATGTA
ACATCATGTCCTTACCAATATTTGGTGATGAGATGCATCGCTATGCCAAG
ATCAACGAAATCATGATGGAAACATACAAACAAACTTGCATCTCACccaa
ttataaaaaattcattGAAGAAATGAAGGTCATCGATTGGAAATCTGTGG
AAGGAGGTCGTCAATGGACATATCAAACTTGCACCGAGTTTGGTTATTAC
CAATCATCGGACAGCAAATCACAAGTCTATGGCACAACATTCCCTTTGAG
GTCGTCAATGGACATATCAAACTTGCACCGAGTTTGGTTATTACCAATCA
TCGGACAGCAAATCACAAGTCTATGGCACAACATTCCCTTTGAGTTTTTG
GACGAAACAATGTGTGGATATTTTTGGCGCCAATTTCAACGAGACGAGTA
TCAACCGAGCTGTTGATTGGACCAATGATAATTACGGTGGCTACAATATG
AACCAACCAAggTTTTTGGACGAAACAATGTGTGGATATTTTTGGCGCCA
ATTTCAACGAGACGAGTATCAACCGAGCTGTTGATTGGACCAATGATAAT
TACGGTGGCTACAATATGAACCAACCAAggattgtCTTTCCGAACGGTTC
AATAGATCCTTGGCATGCGTTGAGTTTCACCGATGATCATAAAGACATGA
TCGCTGTTTTCATTAAAGattgtCTTTCCGAACGGTTCAATAGATCCTTG
GCATGCGTTGAGTTTCACCGATGATCATAAAGACATGATCGCTGTTTTCA
TTAAAGGAACGGCTCACTGTGCTAACATGTATCCTAGCTCGGAGGACGAC
TCACAAGAATTACAAGATGCTCGCCAAAAGATTCATGACTTGGTTGGCAA
ATGGTTGCAAGAAGAATGAGAACGGCTCACTGTGCTAACATGTATCCTAG
CTCGGAGGACGACTCACAAGAATTACAAGATGCTCGCCAAAAGATTCATG
ACTTGGTTGGCAAATGGTTGCAAGAAGAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000029_pilon | genome | sc0000029_pilon:1793961..1799488 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1381-1491:5418 |
| Aaloc | 1291-1377:4425 |
| Aaloc | 1174-1290:3934 |
| Aaloc | 1081-1170:3430 |
| Aaloc | 883-1077:2848 |
| Aaloc | 772-882:2194 |
| Aaloc | 595-768:1343 |
| Aaloc | 406-591:735 |
| Aaloc | 1-402:1 |
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