|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:1388372..1395064+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037813 ID=XLOC_037813|Name=XLOC_037813|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6693bp|location=Sequence derived from alignment at sc0000007_pilon:1388372..1395064+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGACTATCCGCAAGAAGCTTGGTGGTATGAAAAAGCAATTAGAAAA
GGCGTTGGCTGAAGCCAAAGCTGCCGAAGACGAACTTGCTGAGACTAATG
CGAAAGCTGATGCGGTGAGTTCcccggatttttttcattttcttttatac
CTTTACTCTGAAAACTCGTCCATCGAACCAAATCTTCTCACATCTGGTTA
AATGAGCTTTCTTTTCGAAGAAATTTAAAAGATAAGATAGTCACaagaaa
atgtacgtacgcagagaacattttttcatagcccttttttgctttttttt
tctgtcgacttttacgctttttgtacgcatcaaggaaaagcaAAGTTTCT
TAATAAGCATTAAGTTTCAtatatgaaataaaggtccgaaccaaacgatt
tgaattcgaactTTTCTTCATCCgaaggaggggggggggggtgaatgaaa
aagtacgtacttactgGGTGTATAAATATTTGCAGGGGagagggggtact
cgatttccgacattttcgtgcgtacgtactatgtggacggccccgtTCTT
TGTACACGACTTTCGAAAGAGAGAACTTTAATTCTGAGGTAAATTACTTC
AAAACTTGCTAAATTACACATTCTCTGCAATAAAAAATGATTGCCTTTTT
TCTATTATGGACAGGTTGACGAGCAAGTGTCGAAGGTTCTAGAAGAGCTT
GGCTTAATAGAAGATAAATTAGATGAAACAGAATCCAAAATGTCTAGCAC
CGAAAAATCGTTGAACGAAACAGAAAAGAAACAGGACGAAGTAGAAAGGT
TGTTTTTTAATTGGATACTAATAATGTCCATGTTATTCGAATTATACTGA
TTAATATGTATACGCGTATTGTGTATTTATACTAGCCAAAAATATCAGGT
TCTCAAGTTCTGACGAGTTTCACGGTAACTGGTAGCGATTAATGCTTTAT
ATTCTCATCACGGCATAACGTTAGAAGTGGGGAAAAGAAGACAATCCAAC
GATTTTCATCACACAATATCTTTCATACTGCttgttttcccgtcaaaata
gTAAAATGTTATCGTTTGAAAAGTACTAAGCTTTCCGTTGCAAAGAATTC
TTGATTAATGTCGTATTTAAGCTAAATAACATAATTTTCTTTCACGTATG
CGTCAATGCAATCTCGAAAGACTTTTGATTCATAataatactttaggcgt
acaaactttcgcgagcagaaactttcgcgattttcgcgaattttggccct
tttcgcgaaagtaaatgtatttaaaaattctaggaagggccattcgcgaa
agtttatgctcgcaaaaaattcttgaaaaaatagataatttgtaaatctt
caaactttgaataaaatgtaacttttatggcactttttagcctgctataa
gactaataagtcaaaggacaaatgtttcaagccaatccaagaagtatttg
tccctctaagccattttttcatgtgaaaattctcaattctacgtcttgat
tcgcgaaagtttatgctcgcgaaatatatttttccgttaaattcgcgaaa
gtaaatgtcgtgaatttcgcgatttttcgtcctcgcgaaagtttctgctc
gcgaaagtttgtacgcctaaagtaactGTCAAGCAAGCAAGACAACCCAA
CTCTTTAGTAATCAATacttttgaaatgattttatgCTTGCTTTCAGGTC
AAAGAATATGTTAGAGAACCGAAATAGTCAGGAAAGCCAAAAAGCAGATA
AACTTCAAAGTGACCTTGACGAATTAAACAGCAAAAATGCTGAGTTGGTT
GAAAAGCTGGACGCGGTTTGTTGTTTCTATGCTTTTAGATAGAGTCTGGA
ACtacctttccaatggtaccaaaaccttTGTCTCTTTCTCAAGTTACAAG
CTTTcatgccaatttgaagttttggatttcagaagaaaaaaagttcgaaa
ttttcacaactttcaaaacatgttTTGCGATGGGAAGGCTGAATTAGTCA
TTGCCTAACCCAGATATTTCGATAGATAGATCCAGTATGTAAGAGCGAAT
GGATAAGTCCCAAATGGTTAAAAATCTCGTGTCACTGTTTTGTATTAATC
ATGGAATGTTTTATTGATTTGCAGATCACAAAGGAGAGTGACGATTTGGA
AAATACTCTGGACGAAGAGGAAGAAAGAGCTGCAAATGCTGATGCGTAAG
AATGACGTCATCCttctttggggggggggggtttgtacttttacggtgtg
acgggattggcccttttttagtacggtgattacgggatttgacgaaaaaa
gagactggaaaacggtattttaaaatcagacggtgacggtatttaggtac
atttttgccctgtacaagccggtgtgacggtgttattatttttccaattt
tcgggattctgggattcagcaaaaattttgacgggaaaacggtattagcc
tccgtctcggaagaggactgggcccgaatttgcggacgttttcacagttt
cactttcgttttcggctatgcgacagcgttttcaagcagaaagcagagga
aatctgtgaaattatggcagggaatgctaacctatttttccagtgtttct
caagattagagcaagattattgttctagaaagttcataaaggcctaatag
tttcagattagtatgatttcatcagaaaaaacatttacaccaaagctcct
tattgatatgtgaaggctaccaaaaatagcaatgtcctccatcagaacaa
ctttaacataagggacaaggacagaaaatttgcacaaaatacttagagaa
aatggtactatggaagcccattctataatCCTAAATCATAGTTGAAAggt
cagcagttgagagggttgattaaaatagaactcaaagcacacaataaagt
atacatatatatttgtccagaaagaactgttatgttgtttgctttgtttt
ggtgtttaaaaatatgtacttatcagtcctaaaaaaatacaaatttgaat
ataatgagggcaatgagtctggttaaatgttactatatttacaagaaagg
attactgaaaaaatactactgtatgtactactgatgaactaaactcaaaa
actaaaactttaccataaatttacattacgacaatttaaaaatctatctt
taatagcaacaaagaaaaaaacatggctcaaagttttaaacttagagcta
gtcagagcttcaattcacagattcagtaggtataaagctttcaaaatttg
aaaacagacactgcattggtgttactacaagacatactatccacacggtt
ttttcgattcatgaaaaaaataaagtatttatcaaaaaaggttctctttt
tttttggtaatcaattccaacaaacaacaatcaatataacagttttttga
aaaccatcccacagcgtaaacattatcaaccaactaaacccataccgcca
aaattgtaaaaataagtcaatataatttctatcaacaatttctcgtaaaa
tgtttttttccaacattctgataccaatcatggctggaggcatcatgtgt
agagtgactgtgtggcatttcattgcttttaatgatcacaataccaaaca
tcaaccaaacaaaactgacgccaagccaaatctggcgattaaaaatttcc
atgaaaattataattgaaacttatctcgtaaaatgcttttttcaacattc
tggaggtgttcaaagatAGAGCTATCATATGTacagccaagcaatacatg
aaaagtcatttgctatcccatttgccatgagatatatgagtcaacaaatc
aaacaaaaaccaacaaatcatgtctcttcactttcatgtcacatcgtgtt
tatatggggtatcagaaagccaatccacaagaagagccatcttcctttat
tatggagtgttccaaaactattggtaggttgtttggaagtaaagaaaccc
acacagtttgctttattttgaagatttaacttgaaaacaaactgcatctt
tccagtagaaactcatgtttcagcctgctacataacattggtcagtcggg
tcggctactaacatgtaatagttttataatagctgagcttgagaatccgt
aggcagaacttgtaacatgtattatgtgtataattatgtcagtcgacttg
aatcatgatacattacttacatttcactggatgcattttcgctgtgaaat
tatccgcaaaattttctgaccgcgttctgagacggaggctaattacGAAC
CcctacaccccccccccttattccCCATTTTCTACCTTTAAACGTACTTA
TCCGGAGAAAATGGAATTTACTCGTTTTCGTCTTTCGTCTACAAAAACTT
TGCGTATTGGTGTTAAAGGATAGAAGTTTATTAAAGCCataatattgata
tttttgttctgTTAAAAGGCGTGTCAAAGAATTGGAAACGGAGGTCTTGC
AAGTTGGTAATTTATTGCGAACAATGGAGATCAGTGAGGACAAAGCTAAC
CAACGGGAGGATGCGGTCACCACCAAGATTGCTGAAACAACTTCCCAGTT
GGAAGAAGCCACTGCAAAAGCAGAGAAATACGAAACACAGGCTGCTGAAC
TTGATCGGCAACAGGATGAATTGGAAGGTGAGAGGGAAAAGTTTTCTCGC
CTTGTTGTGGAACAAAACAGATTGAAAACTCTTTCGTATCAAGCGAAGAT
TCTTTAACCATATTCATAATAGGCTTCAGGCTTGGGTGGCCTTTCCTGTC
CTTTTCCTTTTCCTCACCTTTTTATCTAATTGGCACACGAGATCCTTGTC
ATGTAATGTAACATTTAACAACGTCCCTCATCATAATTAAAATGAACACT
TGTTTTTCCAAAaagctacacgctttttttatAagaatatcttctataag
aatatcagggtgaaaattggccaaatcatAAGAacaccctaagaataccc
tctagggcagtggcgttgtggcagggggggccatggccccccaacggagc
ttttttgaaggggcgccgaacagcaaggggcgccaaaagagattttttta
aacgcctcaatcttaaaaatcatactgcACCTTTAACTGcgccccaggac
caattttactgagataattttaaaatgcttgcaattttttcgctcgcttc
gctcgcaataaagttgATTGGTAACTTCTTTCCAATCTAGCTAACTTACA
AGTTTTTTGCGTACAATATAGCactattaaatgaaaatctaactgcacCC
AAAGACCAaattgctgacaacaatattgaaattataaaacataatttttt
tcgctcgcttcgctcgcattacacattgtttttttttaagtttcttttca
ctttagcaagtgtcaaatttttctatttttatttagtgatttggAGTaac
ttggcagtcgattttcaaaaattttctagtcggccccaaccatggtggcg
cctgtttatcccttttccattcatcaaagatatatctactcttatccACT
AAAACATtcccttcctcattatgcctagggaaatgaattagtaaaagttt
agaaactagTGGTATGGgcgccactttggaaaattgggggcgccatttaa
aaaaaattgactttggcccctccagaaaaattttcccacaacgccactgc
tagGGTGAAtctcacagaatttgataagaatacagtcactTTGTATTTGG
ATAACAGAAATAAATAAGAGATAAgttgaagctttgaggaagaaattaac
ttttaacccaaatgttaaactcaaaagtccaaaactcccAAAGTCTAAAA
ATGTAAGAATACTTACGTTATGAATATTTTACCtgcaattttggcacttt
cttaagaatacttgaccctcatccaaagtacactattcttataaaaaagc
gtgtattgtaAACTAACCCAGGATTTAGAAAAAGGTTTCCGAAGTTTAGA
ATAAAAAGGTCATTTTATGCTTCTATTCGCTTTACTTGTGCACTCTGCTT
TGCTTATCATGTGGAAAGCATTCTCAGGAAATTacttatttgttttgaaa
attattcatttttatGGCACCTTAATCTCAGGGATTTAATAAGGGATATC
ATGATGCTGAAGGTGTGAagatttttaggtgtcaaaaattaatttatttt
gaagctaaataaaagttaggcaACTTGTTGTCAACATTgcaatttagaaa
aaagttaaatatcaaAGGCCTATCATGCATGATGTTAGTTAGATCATATA
ACCTTAATAATGGCAATGATCTCAGGGTCTGATTTCGACTACTCTCTGGT
ACCTAATAAACGCGgagtttggaataagcgggatTGGTGGGaaaaaaaGT
CCTGGgtggaaagtttttgaaaaggagCCTAATACAGCAGAGCAAAGGAT
GGaacttgcaaaaaaaaattttctcaaaaaatttggttggttggaataaa
aatgtcctggttggaaaattttcgaaaaattaattagcggcggGAGGGTG
GCATATTTAGGTACCCGAGAGAATTGTCTAGTATTATAGCATTGCTAGAT
TCCGGAAAATAGGTATGAGCGAATTGCGCATTATAagttacttttttatt
tcagattcACTGAGCAATGAGAAGGATAATTATAATAAAGTGAAACGCGA
ATACGAATCGACTTTGGCAGAAATCCAAGAAATGAGCGTATAA Coding sequence (CDS) from alignment at sc0000007_pilon:1388372..1395064+ >XLOC_037813 ID=XLOC_037813|Name=XLOC_037813|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1470bp|location=Sequence derived from alignment at sc0000007_pilon:1388372..1395064+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGACTATCCGCAAGAAGCTTGGTGGTATGAAAAAGCAATTAGAAAA
GGCGTTGGCTGAAGCCAAAGCTGCCGAAGACGAACTTGCTGAGACTAATG
CGAAAGCTGATGCGATGGAGACTATCCGCAAGAAGCTTGGTGGTATGAAA
AAGCAATTAGAAAAGGCGTTGGCTGAAGCCAAAGCTGCCGAAGACGAACT
TGCTGAGACTAATGCGAAAGCTGATGCGGTTGACGAGCAAGTGTCGAAGG
TTCTAGAAGAGCTTGGCTTAATAGAAGATAAATTAGATGAAACAGAATCC
AAAATGTCTAGCACCGAAAAATCGTTGAACGAAACAGAAAAGAAACAGGA
CGAAGTAGAAAGGTTGACGAGCAAGTGTCGAAGGTTCTAGAAGAGCTTGG
CTTAATAGAAGATAAATTAGATGAAACAGAATCCAAAATGTCTAGCACCG
AAAAATCGTTGAACGAAACAGAAAAGAAACAGGACGAAGTAGAAAGGTCA
AAGAATATGTTAGAGAACCGAAATAGTCAGGAAAGCCAAAAAGCAGATAA
ACTTCAAAGTGACCTTGACGAATTAAACAGCAAAAATGCTGAGTTGGTTG
AAAAGCTGGACGCGGTCAAAGAATATGTTAGAGAACCGAAATAGTCAGGA
AAGCCAAAAAGCAGATAAACTTCAAAGTGACCTTGACGAATTAAACAGCA
AAAATGCTGAGTTGGTTGAAAAGCTGGACGCGATCACAAAGGAGAGTGAC
GATTTGGAAAATACTCTGGACGAAGAGGAAGAAAGAGCTGCAAATGCTGA
TGCATCACAAAGGAGAGTGACGATTTGGAAAATACTCTGGACGAAGAGGA
AGAAAGAGCTGCAAATGCTGATGCGCGTGTCAAAGAATTGGAAACGGAGG
TCTTGCAAGTTGGTAATTTATTGCGAACAATGGAGATCAGTGAGGACAAA
GCTAACCAACGGGAGGATGCGGTCACCACCAAGATTGCTGAAACAACTTC
CCAGTTGGAAGAAGCCACTGCAAAAGCAGAGAAATACGAAACACAGGCTG
CTGAACTTGATCGGCAACAGGATGAATTGGAAGGCGTGTCAAAGAATTGG
AAACGGAGGTCTTGCAAGTTGGTAATTTATTGCGAACAATGGAGATCAGT
GAGGACAAAGCTAACCAACGGGAGGATGCGGTCACCACCAAGATTGCTGA
AACAACTTCCCAGTTGGAAGAAGCCACTGCAAAAGCAGAGAAATACGAAA
CACAGGCTGCTGAACTTGATCGGCAACAGGATGAATTGGAAGattcACTG
AGCAATGAGAAGGATAATTATAATAAAGTGAAACGCGAATACGAATCGAC
TTTGGCAGAAATCCAAGAAATGAGCGTATAAattcACTGAGCAATGAGAA
GGATAATTATAATAAAGTGAAACGCGAATACGAATCGACTTTGGCAGAAA
TCCAAGAAATGAGCGTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:1388372..1395064 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 649-735:6607 |
| Aaloc | 439-645:4420 |
| Aaloc | 367-435:2125 |
| Aaloc | 250-366:1699 |
| Aaloc | 115-246:665 |
| Aaloc | 1-114:1 |
|
