XLOC_037836 (mRNA) -

Overview


Name	XLOC_037836
Unique Name	XLOC_037836
Type	mRNA
Organism	Clytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence

The following sequences are available for this feature:

mRNA from alignment at sc0000067_pilon:1038298..1040895-
coding sequence from alignment at sc0000067_pilon:1038298..1040895-

mRNA from alignment at sc0000067_pilon:1038298..1040895-

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_037836 ID=XLOC_037836|Name=XLOC_037836|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2598bp|location=Sequence derived from alignment at sc0000067_pilon:1038298..1040895- (Clytia hemisphaerica_ch_hm2_pilon)
GAAAACCTATCAGAAGATGGAGAATGTCTTATTGTCGCTGGACTGAAGTG
GCTACCAAAGCATGACTTACTCTCGCTCAACGTCGGCGACCTCAATTTTG
CAAAACGACAAAGAGGAAAGAAACCTGAAGCTAAATCAAACGTTATTCCA
AATGTACTGACAAAACGCCATTGTGCATCAAAGGTTGGAGAAATCTATGA
TCTTCTTGGCAAGACCACACCAATAACAGCTACATTTAAAATCGACTTAC
ATGATCTAGTTTTGAGAAAGCTAGACTGGGATGACCCCATTCCATCTGAG
CTTCGTGATACTTGGCTCAACAATTTCCAATTAATGCAGGATCTTAAATC
GATTCATTTCAAACGATGTATCATACCTGAAGATGCATTATCGTTACAGA
TCGAAACAATAGATGCAGCTGATGCAAGTGAAGTCGTTGCTTGCTCTGCA
ATCTACGCTCGCATCAAGCGACGTGATGGATCCTACCATTGTCAACTTAT
CTTTTCGAGATCAAAACTCCTTCCAGACGGAATATCTCAGCCACGTGGTG
AGATGATTGCTGCTATCATGAATGTTCACACTTCAGAAGTTGTTAGCAGA
TCGTTCGGTGCACTTCACAAGTCGTCAATAAAGCTATCTGATAGTCAAGT
CGTCCTTCATTGGATTAATAATGAGGAGAAACCACTCAAAAAATGGGTGA
GGAGTCGAGTGATCGAAATCAGAAGACTGTCGTCACCAGATAACTGGTTT
TATGTCAGCTCACAAAACATGATAGCAGATGTTGGCACAAGGAAAGGTGT
GCAGATTGAAGAAATTTCTCAAAATTCCAATTGGATCAATGGCCTTCCAT
GGATGTCTAAAGATCGATCCGAATTTCCAATCACTCGTATTTCTGATATC
ACCTTGAGCCAAACAGAATTATCAAAGATCAATGAGGAAACCTTGCCTCA
TCAAACACACTTTTTATCAAATCCAGATCAACCGTTATCAATTGTTCCTG
ATGAAGTCAAGGAACGTCATCAATTTTCAAATTACCTGATCGATCCAAAT
CGTTATCGATTCAGCAAAGTCGTCAGAATATTAAGCTACATCTACAAATT
CATTAGATTGAAGTTTGATTATTCACCAATCGAAAGTCAAAAGGCAACTC
GATCACAAGACATCGATGCAGCAAAAGCTTACTATTTCAGGAAGTGTACA
GCAGAAGTCAAACATTTTCTTCCGGAGAGCAAATACAAGAAGATCTCCAA
GACGAATGACGATATCCTGTATTACACCGGACGAATCCTATCTTGTGACG
ACTTCACAATCACAGGAAAGTTTACCAGAGTCATGAAGGATTTGACATCC
ACAACATTTTGTGTACCGATCATTGACAAGCACTCTCCTGTGGCATATGC
TATCATCAATGAGGCTCACTGGTACAACGAGTCCTGTTCTCATCGTGGAA
TCGAAACCACTATCAGAAATATTTTGAAAGAAGCTTACATCTTTGAGCTA
CGATCAATTGTTAAGAGGGTCAAAAAGTCATGTCAACGGTGTCGTTACTT
GATGAAAAAGACGATCGAAGTTTCGATGGGTCCCTTACCTTCATTCAACT
TAACAATCGCTCCTGCTTTCTACGTCAGCCAGGTAGACTTATCTGGTCCT
TACAAGGCATATTCAAAGCACAACAAGCGAACAACCCTGAAGATATGGCT
CGTAGTCTTCTGTTGTTGTACCACTTCTTCCATTTCCATCAAAATAATGG
ATGATTATTCAACCCCTGGATTCATCCAAGCATTTATCAGATTTGCAAGC
GATTCCGGCTTTCCAAAAACCTTGTTGTGTGATGAAGGAAGTCAGCTAAT
CAAAGGCTGTTCCGAGATGAAACTGAACTTCAGAGACACGATGAATCAAC
TTCACAGAGATGTTGGTGTTGAGTACAACACTTGCCCTGTCGGTGGTCAC
AACTTTCATGGGAAGGTTGAAAGAAAGATCAAAGAAATCAATTTGTCGAT
CGAGAAAGCTACTTTAAACTGTCGTTTATCTTTGCTACAATGGGAAACGT
TGGGTTCAATGATTGCCAATTCCATTAACAACCTACCTATTGCAATCAGG
AATGAAGTTTCTGATTATGAAGCCATCGATCTTCTAACGCCAAACCGCCT
TCGTTTGGGAAGGAATAACGAAAGATGCCCTCACGGTGAGATGCTTACCA
CATTCAATCCATTAAAGGTTGTGGAAGAGAATATAGAAATTTTCAACGCC
TGGTTCGAAGTCTGGTTGTTACATATTCCCAATTTCATGTCTCAAAGCAA
ATGGTTTCGCGACGATAAGCCGTTATCGAAAGGAGATGTTGTCCTATTTA
CTAAGCAGGAATCCGTCCTTTGCAAAGATTATCAGTATGGAATCGTTGAC
GATGTTCAAATTGGAAAAGATGGGAAAGCAAGACGTGCTTCAGTCTGCTA
CAAGAATCACCAAGAAAAGAGATTTCGCTTTACAAATCGAGCCATCCGTT
CATTGGTACTCATCCAATCTATCGACGAACTCGATATCATGACGGAGCTT
GCTACGATGGCTTGTCTCGCTGATTCAAGGATCGGTGCTTCTCAGTGA

Coding sequence (CDS) from alignment at sc0000067_pilon:1038298..1040895-

>XLOC_037836 ID=XLOC_037836|Name=XLOC_037836|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5196bp|location=Sequence derived from alignment at sc0000067_pilon:1038298..1040895- (Clytia hemisphaerica_ch_hm2_pilon)
GAAAACCTATCAGAAGATGGAGAATGTCTTATTGTCGCTGGACTGAAGTG
GCTACCAAAGCATGACTTACTCTCGCTCAACGTCGGCGACCTCAATTTTG
CAAAACGACAAAGAGGAAAGAAACCTGAAGCTAAATCAAACGTTATTCCA
AATGTACTGACAAAACGCCATTGTGCATCAAAGGTTGGAGAAATCTATGA
TCTTCTTGGCAAGACCACACCAATAACAGCTACATTTAAAATCGACTTAC
ATGATCTAGTTTTGAGAAAGCTAGACTGGGATGACCCCATTCCATCTGAG
CTTCGTGATACTTGGCTCAACAATTTCCAATTAATGCAGGATCTTAAATC
GATTCATTTCAAACGATGTATCATACCTGAAGATGCATTATCGTTACAGA
TCGAAACAATAGATGCAGCTGATGCAAGTGAAGTCGTTGCTTGCTCTGCA
ATCTACGCTCGCATCAAGCGACGTGATGGATCCTACCATTGTCAACTTAT
CTTTTCGAGATCAAAACTCCTTCCAGACGGAATATCTCAGCCACGTGGTG
AGATGATTGCTGCTATCATGAATGTTCACACTTCAGAAGTTGTTAGCAGA
TCGTTCGGTGCACTTCACAAGTCGTCAATAAAGCTATCTGATAGTCAAGT
CGTCCTTCATTGGATTAATAATGAGGAGAAACCACTCAAAAAATGGGTGA
GGAGTCGAGTGATCGAAATCAGAAGACTGTCGTCACCAGATAACTGGTTT
TATGTCAGCTCACAAAACATGATAGCAGATGTTGGCACAAGGAAAGGTGT
GCAGATTGAAGAAATTTCTCAAAATTCCAATTGGATCAATGGCCTTCCAT
GGATGTCTAAAGATCGATCCGAATTTCCAATCACTCGTATTTCTGATATC
ACCTTGAGCCAAACAGAATTATCAAAGATCAATGAGGAAACCTTGCCTCA
TCAAACACACTTTTTATCAAATCCAGATCAACCGTTATCAATTGTTCCTG
ATGAAGTCAAGGAACGTCATCAATTTTCAAATTACCTGATCGATCCAAAT
CGTTATCGATTCAGCAAAGTCGTCAGAATATTAAGCTACATCTACAAATT
CATTAGATTGAAGTTTGATTATTCACCAATCGAAAGTCAAAAGGCAACTC
GATCACAAGACATCGATGCAGCAAAAGCTTACTATTTCAGGAAGTGTACA
GCAGAAGTCAAACATTTTCTTCCGGAGAGCAAATACAAGAAGATCTCCAA
GACGAATGACGATATCCTGTATTACACCGGACGAATCCTATCTTGTGACG
ACTTCACAATCACAGGAAAGTTTACCAGAGTCATGAAGGATTTGACATCC
ACAACATTTTGTGTACCGATCATTGACAAGCACTCTCCTGTGGCATATGC
TATCATCAATGAGGCTCACTGGTACAACGAGTCCTGTTCTCATCGTGGAA
TCGAAACCACTATCAGAAATATTTTGAAAGAAGCTTACATCTTTGAGCTA
CGATCAATTGTTAAGAGGGTCAAAAAGTCATGTCAACGGTGTCGTTACTT
GATGAAAAAGACGATCGAAGTTTCGATGGGTCCCTTACCTTCATTCAACT
TAACAATCGCTCCTGCTTTCTACGTCAGCCAGGTAGACTTATCTGGTCCT
TACAAGGCATATTCAAAGCACAACAAGCGAACAACCCTGAAGATATGGCT
CGTAGTCTTCTGTTGTTGTACCACTTCTTCCATTTCCATCAAAATAATGG
ATGATTATTCAACCCCTGGATTCATCCAAGCATTTATCAGATTTGCAAGC
GATTCCGGCTTTCCAAAAACCTTGTTGTGTGATGAAGGAAGTCAGCTAAT
CAAAGGCTGTTCCGAGATGAAACTGAACTTCAGAGACACGATGAATCAAC
TTCACAGAGATGTTGGTGTTGAGTACAACACTTGCCCTGTCGGTGGTCAC
AACTTTCATGGGAAGGTTGAAAGAAAGATCAAAGAAATCAATTTGTCGAT
CGAGAAAGCTACTTTAAACTGTCGTTTATCTTTGCTACAATGGGAAACGT
TGGGTTCAATGATTGCCAATTCCATTAACAACCTACCTATTGCAATCAGG
AATGAAGTTTCTGATTATGAAGCCATCGATCTTCTAACGCCAAACCGCCT
TCGTTTGGGAAGGAATAACGAAAGATGCCCTCACGGTGAGATGCTTACCA
CATTCAATCCATTAAAGGTTGTGGAAGAGAATATAGAAATTTTCAACGCC
TGGTTCGAAGTCTGGTTGTTACATATTCCCAATTTCATGTCTCAAAGCAA
ATGGTTTCGCGACGATAAGCCGTTATCGAAAGGAGATGTTGTCCTATTTA
CTAAGCAGGAATCCGTCCTTTGCAAAGATTATCAGTATGGAATCGTTGAC
GATGTTCAAATTGGAAAAGATGGGAAAGCAAGACGTGCTTCAGTCTGCTA
CAAGAATCACCAAGAAAAGAGATTTCGCTTTACAAATCGAGCCATCCGTT
CATTGGTACTCATCCAATCTATCGACGAACTCGATATCATGACGGAGCTT
GCTACGATGGCTTGTCTCGCTGATTCAAGGATCGGTGCTTCTCAGTGAGA
AAACCTATCAGAAGATGGAGAATGTCTTATTGTCGCTGGACTGAAGTGGC
TACCAAAGCATGACTTACTCTCGCTCAACGTCGGCGACCTCAATTTTGCA
AAACGACAAAGAGGAAAGAAACCTGAAGCTAAATCAAACGTTATTCCAAA
TGTACTGACAAAACGCCATTGTGCATCAAAGGTTGGAGAAATCTATGATC
TTCTTGGCAAGACCACACCAATAACAGCTACATTTAAAATCGACTTACAT
GATCTAGTTTTGAGAAAGCTAGACTGGGATGACCCCATTCCATCTGAGCT
TCGTGATACTTGGCTCAACAATTTCCAATTAATGCAGGATCTTAAATCGA
TTCATTTCAAACGATGTATCATACCTGAAGATGCATTATCGTTACAGATC
GAAACAATAGATGCAGCTGATGCAAGTGAAGTCGTTGCTTGCTCTGCAAT
CTACGCTCGCATCAAGCGACGTGATGGATCCTACCATTGTCAACTTATCT
TTTCGAGATCAAAACTCCTTCCAGACGGAATATCTCAGCCACGTGGTGAG
ATGATTGCTGCTATCATGAATGTTCACACTTCAGAAGTTGTTAGCAGATC
GTTCGGTGCACTTCACAAGTCGTCAATAAAGCTATCTGATAGTCAAGTCG
TCCTTCATTGGATTAATAATGAGGAGAAACCACTCAAAAAATGGGTGAGG
AGTCGAGTGATCGAAATCAGAAGACTGTCGTCACCAGATAACTGGTTTTA
TGTCAGCTCACAAAACATGATAGCAGATGTTGGCACAAGGAAAGGTGTGC
AGATTGAAGAAATTTCTCAAAATTCCAATTGGATCAATGGCCTTCCATGG
ATGTCTAAAGATCGATCCGAATTTCCAATCACTCGTATTTCTGATATCAC
CTTGAGCCAAACAGAATTATCAAAGATCAATGAGGAAACCTTGCCTCATC
AAACACACTTTTTATCAAATCCAGATCAACCGTTATCAATTGTTCCTGAT
GAAGTCAAGGAACGTCATCAATTTTCAAATTACCTGATCGATCCAAATCG
TTATCGATTCAGCAAAGTCGTCAGAATATTAAGCTACATCTACAAATTCA
TTAGATTGAAGTTTGATTATTCACCAATCGAAAGTCAAAAGGCAACTCGA
TCACAAGACATCGATGCAGCAAAAGCTTACTATTTCAGGAAGTGTACAGC
AGAAGTCAAACATTTTCTTCCGGAGAGCAAATACAAGAAGATCTCCAAGA
CGAATGACGATATCCTGTATTACACCGGACGAATCCTATCTTGTGACGAC
TTCACAATCACAGGAAAGTTTACCAGAGTCATGAAGGATTTGACATCCAC
AACATTTTGTGTACCGATCATTGACAAGCACTCTCCTGTGGCATATGCTA
TCATCAATGAGGCTCACTGGTACAACGAGTCCTGTTCTCATCGTGGAATC
GAAACCACTATCAGAAATATTTTGAAAGAAGCTTACATCTTTGAGCTACG
ATCAATTGTTAAGAGGGTCAAAAAGTCATGTCAACGGTGTCGTTACTTGA
TGAAAAAGACGATCGAAGTTTCGATGGGTCCCTTACCTTCATTCAACTTA
ACAATCGCTCCTGCTTTCTACGTCAGCCAGGTAGACTTATCTGGTCCTTA
CAAGGCATATTCAAAGCACAACAAGCGAACAACCCTGAAGATATGGCTCG
TAGTCTTCTGTTGTTGTACCACTTCTTCCATTTCCATCAAAATAATGGAT
GATTATTCAACCCCTGGATTCATCCAAGCATTTATCAGATTTGCAAGCGA
TTCCGGCTTTCCAAAAACCTTGTTGTGTGATGAAGGAAGTCAGCTAATCA
AAGGCTGTTCCGAGATGAAACTGAACTTCAGAGACACGATGAATCAACTT
CACAGAGATGTTGGTGTTGAGTACAACACTTGCCCTGTCGGTGGTCACAA
CTTTCATGGGAAGGTTGAAAGAAAGATCAAAGAAATCAATTTGTCGATCG
AGAAAGCTACTTTAAACTGTCGTTTATCTTTGCTACAATGGGAAACGTTG
GGTTCAATGATTGCCAATTCCATTAACAACCTACCTATTGCAATCAGGAA
TGAAGTTTCTGATTATGAAGCCATCGATCTTCTAACGCCAAACCGCCTTC
GTTTGGGAAGGAATAACGAAAGATGCCCTCACGGTGAGATGCTTACCACA
TTCAATCCATTAAAGGTTGTGGAAGAGAATATAGAAATTTTCAACGCCTG
GTTCGAAGTCTGGTTGTTACATATTCCCAATTTCATGTCTCAAAGCAAAT
GGTTTCGCGACGATAAGCCGTTATCGAAAGGAGATGTTGTCCTATTTACT
AAGCAGGAATCCGTCCTTTGCAAAGATTATCAGTATGGAATCGTTGACGA
TGTTCAAATTGGAAAAGATGGGAAAGCAAGACGTGCTTCAGTCTGCTACA
AGAATCACCAAGAAAAGAGATTTCGCTTTACAAATCGAGCCATCCGTTCA
TTGGTACTCATCCAATCTATCGACGAACTCGATATCATGACGGAGCTTGC
TACGATGGCTTGTCTCGCTGATTCAAGGATCGGTGCTTCTCAGTGA

Gene-mRNA-Prot

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
XLOC_037836	XLOC_037836-protein	Clytia hemisphaerica_ch_hm2_pilon	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000067_pilon	genome	sc0000067_pilon:1038298..1040895 -

Properties


Property Name	Value
Aaloc	1-2598:2599

You are here

XLOC_037836 (mRNA) -