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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:1731724..1740008+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045187 ID=XLOC_045187|Name=XLOC_045187|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8285bp|location=Sequence derived from alignment at sc0000043_pilon:1731724..1740008+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCACCACCAGATATTAAGAAGTTATTGAGGATCAAAATCAAGCCACG
TAAAGATCCATACACGGATCAATTCAGTCGTATCTTCATGGTCAAGATGA
TGATGTTAACTGCCACCATCACTGGGTTGAGCTGGGCCAAAGATAAGGTA
ATAATAAACACTTCCTTCTTACAGACCCACTGGGGTCCAcctggaaaaat
tggtcaaaatatcgtccccagtggaaaattatactctaatttttgtccca
actaaaaataatcagaaattatcgaaatcctcactgcaaactatttttcc
atccccactgaattttctggctcaaaaacaatgaaattcaaatccccagt
gATAACGaacatggaaatatcaatccccatcgagttttggtctgttattt
tacccccactagctgaaaaaatcctaccgggtctgtgagaaggggtgtta
aTAAATAGATTAATAAAGGCCAATAAAGGTATACCAGCAAATTTTATTAG
TACTTGCTCCAAGTCAAACTTGAGATAACAAGGACTTTAATGTATGAAAT
TCCTGTTGATTGGGTTAAATTGTTTGAAAGTTGGAAGtttcagtcaaaat
tttctcggtttcattttttgtgctcggtcttttacagtttttacaatttt
ttagaGCAAGAAAAAACTATTGCTTTTAGGTCTCAATTGTTTTTAAATAG
GTTCATTtgtgattaaaaaaaagtgattaCTGTTCAATTAAAAGAAAACG
TTTTATCTGTGTCAGCACGATTTGTGAAATTCGTACACTCTAACACGATA
ATGGCATAACTACGATGAAACACGAATTTTGCACATAAAAATGTATAGTA
AAATGCCTCAGTCATCATAAAGACTTATTTTTTCTCGACAAGAAATACTT
TTAAGGCATTTGAAGGTCGTACAGTCGCTTGCTTCTCTTGAGAAGGACTT
CTGGTTGTGCTTGTGTATAAAAAATGAGTCTTGACATTAGAAAATAGCGC
TACGGAAAACACAAAACTGTCAACTGTTGATACACGTTTCCGTTCTCCTT
GACCACAAAACTTGCTatgttatgtttttgttttggttacCTCGAAAAAG
GTGTCTTATGACTCTGTATTAAACTATAAGTGTTTGAATTTCTTCCATTT
AATTCATCGTctttataccttatcggccctgtTTACGCCAGCCCTAATTT
AACACCGGCctcttttacgccggcccttattccgccacagcctaattttg
ggcttatgccaattagggccgtaaataacgccaaaagttttggccctttt
tacgccagcccttttaacaccggcccttattacgtcacgagcctaaaaat
aacgccaataagggccggcgtaaaaagggcctaGAGGGGCTCTTCCCTCT
TTCCTACAATTGTAGGGTGTTTTTCTCattggggacgaaattttggccaa
atcgtCCTTAAAACAATTGATATATGTGTTCCTATTAAAATGCTTACTTT
GTCACTTTGTTTGTTATTGCCGAcctaaaaaaatatcagcgttttgattg
gtcgagagcatcgagatatttgcgatatttcatatttctttagtctggaa
atatgaacgcgttgacttttgggggactgggtaagcggcgggaggaaaat
caaaacaaaacagccgaaaagaactgacttttggagaaactgacttggga
atcaaagggaaaaatgcatcaaaaatatgttcagattaacttttactttg
gagttcttccataaaagacactaaaatcaaatctgatgaactaagaaatt
ataaaactacttgacaccacccaaatattttcaacttttggcaaatttgt
ccgtgtgataaccaaacagttttttatccatgcatacaaaatacatgttt
tttttttataagcaagtgtctgcccctatatcaggctcgcattatgctta
gcattctattgttctcaaacaatagagccattgtttaggtgccaaaaact
gagcctgcgtatgcttataaacgttatgcttataaaagaaaaaacatgta
acttgagattcttgaatgttggccaaaaagatttctcataacataacaag
ggaagtgtaatgtcttgtattaaaccaaatgacgagtgatttttatgaaa
gttctctcctaattctcgttctcgacaacaacgtacgtccttgacttttc
aactcaacaatcattacatcttccttctaaaattcgaaacatttagagct
tgactataatcaagaaagtatccaaattgttttgctgttgaaaaatgttg
ttctttaaccattattacaagcatacatttccatcgtgggactcctttcc
tctgctattctttcccTTGGCCATatgtcatcgaaacaaaaaaatagaaa
aagactgaatgttatcaatctgattaatccaatgatggagggtttcttct
ccatcgaaacaatactgtacatcatctgcattttgaattatcaatctaga
aactttcaaatacatctctgaaaaatctgcaacttttcaaaacaaaactt
ctggatcggaaatgatcgaaaagttttgtttttgtgtgaatattttcagc
gggaagttatcgaatgtttttgttcgaatctaacgttcgaattagatttt
cgaataaaagcattcgaaactacacagaagcagaagaaggcggaagtaag
ttttgaaacaaaaagaggacaatttttttgagtcgacaataaattagtta
tcacatgacttctcgtgcaatactcgatattttactcgttccgagatttt
accgatatttttcctcgcctaaaggctcggaaaaatattacggaaaaatc
tcggaactcgtaaaatatttctcgtattgcactcgaaatcatgcgataac
tagtacttattaagcagatattcaatgggtaaaagttggttattgagatt
tattaacccgaggtgatgtaatattcaacgaggcggagccgagttgaata
ttcatcaccgagggttaataaatccaataaccaacgaaaacctattgaat
atatgttttattatatacgagtctgctaaattgcgtgggttgcgtgggtg
cgtgggtcaatatttttgcgtgggttaatatttttgcgtgggtcattttt
ttgcgtgggtgcgtgggtcaaaatattttttgcgtgggtcaaattttttg
cgtgggtcattttttttgcgtgggtcattatttttttgcgtgggtcaatt
ttttttgtgtgggtcaaactttttgcgtgggtcaaaatttttgcgtgggt
cattattttttgcgtgggtcattttttttgcgtgggtcattatttttttg
cgtgggtcaatttttttgagtgggtttctatttttttggtgattttttag
ctaactcgatttttttacaaaattgaaactttcgagttagctaagacgtt
ttttttgtcaaattaaaattttcaagttatcttttacaaaaatgtgttgt
gtatatatctacgaaaactaaacaaaagcacacagtttttatgtagtaac
accttgtggtttattttacatagctgcacttatttactataacattatac
agaatcaacacacacccgtctaatttttgtagacacacttcaggatcaca
cttttgaattttagcatgctatatttcaggattccagtgtcatgaaaata
aacactacaactttaattttttcctcccttttctattgctttgaaaaaaa
gtacagcgtctttatttcgtccaattttttaaattggcctttaatgtact
taaatcaaagaaattacaagtggGGTGGACGAAATAATTGACAACGATTA
AATTGTTTAGTAATCGGTCGCCTAATGAATAtaacttttgtagaaaaatg
TTCAGATTTTGTCTTCATTTGCTTTGTTCTTTAACACTCAAAGGAAACCC
AAAAGACTAAAGCGTGCTATAAGAAGCTTTAAAGCTTCTAAAAAGATTCT
ATaaaaaaaagcttcctcttataaaaagacagctacagctatgcaaaata
aacaaaataaaccaaaacgtgttatgtaaaacacatccaacattttggat
gtgaccagtgcgaatttcaagggaaTGCATTTTTTCGAATTACATAGAGA
ATTTTGACCCACGCAAAAATTTTGACCCACGCAAAATatatgacccacgc
acaaaatatgacccacgcaaaaaataatgacccacgcgaaaattttgacc
cacgcaaaaaatttaacccacgcaaaaaatatgacccacgcaaaaaaatt
gacccacgcaaaatttttgacccacgcaaaaaatattttgacccacgcac
ccacgcaaaaaaattacccacgcaaaaatatcgacccacgcacccacgca
cccacgcaacccacgcaatttagcagactcattatatacctagaggcaaa
aacaaaacattaataatTGTGTCAATAGTCGAACGtttcacataaaacac
tcccataatcgaacgttcgaatgtttttcttttttaaagattttcttaat
tactttgagaCATAAAATTGTTCATGAAATTCACAatagatttttttaat
gaatatcTTTGATTTAACAACAAGAACGACAAAAAGAATCaaactttgaa
tgaaaaatgtgaaaaaaaaattctaccgtggtataatagccatggtatat
caggaattattcgatggctgtttttgcctacaggtatataataaatcaat
ttatttatttattttatcaagTTCAGTTAAAATTTATAGGAAACTACCCC
ttgatattttaacaaaatcgTCTTTACTATCTGAAAGGTCGTGAGTCATA
AAAATACCCATTTTTATCTGTGTTATCTGTTATACCACTTTTCTTTTAGT
TTACTTGTATCGTTCCAAAGAACCACGAGACAACGGCAGCTTTCGTTCAA
AAAGCTTGTTGGATTAACGGTGTTTACATCTACAAGAATTTGAACCCTGT
CTTCAACAGCTTTTACTACGGCATCCCTAAAGATATTTCGCATAATGGTA
AGAACAGCTAAGGAACTTGTAATGTATAAAACTCATGAGTTGATAGATTT
TTGAGCATATGTCTACTACATATTAAATCGCAGAACCAAGCACTCTTGAG
TTGATAAAGCtcaggcccggtggaagcggGAGACttcacttttgagcaaa
tgagatttttctctcgaattcctagcgaattttattttgagccttcagcc
tccccactttaacggttgttccgccgggcgtGAAGTTCAGTGCATTATTT
TATTATGGAAGGCTGTCATAAGGCTTAATTAGctctctctctctTTTATG
TAAAGCAttcgaaattttgaataatttctcGAAATTTTCGTACTTTTTTA
TCCATACATTTCATGGCAAAGATGTTTGTAACGCGTGCTCTGCTGTTGTA
ACGAATTTTAAAGCCcacttaaaagttttatttttacataattgttcccg
ttttatatcagacacatagACTCAGACTCagttttttctttcctctttct
gtccaatcttgctccacatccgtgtcaatccaacgtgaaaaagcttgtga
attaaacttgatgagtaagcaaacgatatcactcctTTAAGatcatttaa
attttctttccttttaggTGAAAACAATTATGGAGCCCTTTGTAACAGTG
ACAAAGACCAAAATTGTGATCCACTCGAGAAAACTTTTTATCTCCAATAT
CAATGGTTCCCACTTGGTGTTGCAGCCTTAGCTTTTCTATATTATCTCCC
TTATTTACTGTACTGTGTTGTCAACGCTGATTTGATTCTCCTGAAGAACA
GcatcaaaaagaagaaacgaGAAGAGGTGGATTACCAAgaattgattgat
aaacttttcACACCTTCCAATTCGCCACATGGAGCTGCAAGAACTTTGTT
AAACCTCTTGGTCAAGATTTTATACATCATTGTCAACGTTTTAGGGATAG
TAACTATTGATTCAGCAATCAATGGTGAATATGTATCATTTGGAACTTCG
TGGACAAAGTGGCTTCGTAAGTTTGTCTgatatctttttgttttcaaatc
tcAATTTATTACAAATTCATTGCAATGATTTGAAAAAGCATTTTTACACA
TTGTATTTACAACAAACTCAAGTCAAAGTTTTGAATGAAGCCGGACTTTG
CAATCACAGTATGTATTCGTACTCTTGGATACTCGTGGCAGCTAAAATCC
GTTTACTCATAGTACAAAACCGAAATAGCGGGATAAAATTCTATCGAAAA
ATCCGCTGGCAAAATCGAACTAAGTCTTATACCCTGAGTGTTATTAGAAA
TATGTACTTTTGCAAACTGTTTTCTCTTTAGGTCTTACACCTGACCAGCG
ACACGATTACACCGTACCACGAAATCCTAAAGCCGGACACTCCCTTTTAC
CAGCATTCGGTCTTTGCGAGGTTGTGACAGCAGCCAATGATCTGAAGAAC
ACAATTTACAATAAACATACTTTCGTATGTGAACTCAGCCAACATGTGTT
GTACCAATATATCTTGATCATCTTATGGTAAGAACGACCTCTTtatctca
aattttttttaaaacacaaGCTGAAATATCTTATATACTTCATTCTAAAA
CATGTGGGTACTTCTGCTAATTTTATACGGAAATGTTCAAGAATcagtat
agaccttttcatagattacgtcacaaacatcacctgcctcgttttaaaat
tattaccatggtgattaacccccagcagattttattaaactACTCTCTAT
TCATAAAGGGACATAATAAGGGACATAataaccatggtaattgtttgaat
acgaggcaagtgatattcatgacataatttatgaaaaggcctatttgCTG
TATTTATTTTCTCGTAGACAAAGAATTTTGACGCCGTTTCTTCCTGATAT
ATTCGACTGAACACCCTTTGTGGGGTTCATCAATAAGGTTAATAACGACT
CTTTTCGACCCTTTTCAATTGTACTCTCTCCACAGGTACATCATTGTTGC
TGGTATCATCATTTCAATAATTGGTTTCCTCATGCACATCTTCAGTGATT
TTACTGCTGCTTTCTGCATTGGTTTCCAAGGTCAGTCATTTTTATGGTTC
CTTTCGTCTGTGCTAATGGTAACGAATAATTAAACGAGTTATTCTTCTTA
AATGTTAACTATGGTTTTGTAAAAGGTTTCCGTTAACTTCAGTTACAAAC
AATCTTGGGAGTTGCGCGATGGCGACCAAAGGGCCTCAAAATGATGCCTC
TCAGATCAATAATTTTTACCACTCTATTTTTTAAGCTCCACATAACTAGA
GTGTTTTTAAGCCACAAGGAGGAAGATTTGTCCACGGACTTTCACGAATA
TTTAAGGGGAAAGACTTTTTCATCTGCATTTTCAATATAAATATcttcac
aaaaatatttcatggACGTACTATACAAATTCTTTTAACATATAGGTCGT
GATATCAGCACACTGTATCGTGCTTTGAACACACGTGAACGCCAACTGTT
GGACTTCGTACGCAAGAAGAACATGCCAGTCTTCGGAGAGTTGTTGGATA
AACTCTACATTGCCAAAAACATCAAAGTGAGTAGTTAGCTCTTTATTACC
GATTCTCGGGAATGATAAATCTTATCAAAATGACATCCCCTTCTCACAGA
CCTGGTGGGATTTTTTCAGCCAATGGGGATAAAAATAACAGAAGAAAGCT
CGATGGGGATTGATATTCCTAAATTTTTTATGGCCGGGGATTTAaattct
tttgttttcaagtcagaaaattcagtggggatgggaaaagtattaaatta
ttttgcagtgaggattggtttatttgtttGAGGATTTGGTCCCAGTGGGA
AGAGGTCccagtgggtttgtgagaaggggggggggggtaaattttaTCGG
GAAAAGTGAAACAAAACACTTATATGGCTATAAACTTATGGCAGAATAAG
CCTGATTTTTACAAACTTTTACAAACTCTAAGCTTTTGCCGAATCTGGAT
TTTTCTGGTCTTTTCTGGTACCATGAGTGAAGATTTACGTTCCCTTTTTC
GGGAATCCCTAAAACACCCGGAATCTACATTTTAGGAAATCTTGCCCAAT
CAGTTCGTCTAAAATCGATAATTCtgtaaatttatatttttcttttcttt
atagcCTGATCCATTGAGTGAAGACCCTGATCAACGAGCAGCGATGAGCC
GAAAAGAACAGATGATGGCTGACCAAGATTATTGA Coding sequence (CDS) from alignment at sc0000043_pilon:1731724..1740008+ >XLOC_045187 ID=XLOC_045187|Name=XLOC_045187|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2394bp|location=Sequence derived from alignment at sc0000043_pilon:1731724..1740008+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCACCACCAGATATTAAGAAGTTATTGAGGATCAAAATCAAGCCACG
TAAAGATCCATACACGGATCAATTCAGTCGTATCTTCATGGTCAAGATGA
TGATGTTAACTGCCACCATCACTGGGTTGAGCTGGGCCAAAGATAAGATG
GCACCACCAGATATTAAGAAGTTATTGAGGATCAAAATCAAGCCACGTAA
AGATCCATACACGGATCAATTCAGTCGTATCTTCATGGTCAAGATGATGA
TGTTAACTGCCACCATCACTGGGTTGAGCTGGGCCAAAGATAAGTTTACT
TGTATCGTTCCAAAGAACCACGAGACAACGGCAGCTTTCGTTCAAAAAGC
TTGTTGGATTAACGGTGTTTACATCTACAAGAATTTGAACCCTGTCTTCA
ACAGCTTTTACTACGGCATCCCTAAAGATATTTCGCATAATGTTTACTTG
TATCGTTCCAAAGAACCACGAGACAACGGCAGCTTTCGTTCAAAAAGCTT
GTTGGATTAACGGTGTTTACATCTACAAGAATTTGAACCCTGTCTTCAAC
AGCTTTTACTACGGCATCCCTAAAGATATTTCGCATAATGgTGAAAACAA
TTATGGAGCCCTTTGTAACAGTGACAAAGACCAAAATTGTGATCCACTCG
AGAAAACTTTTTATCTCCAATATCAATGGTTCCCACTTGGTGTTGCAGCC
TTAGCTTTTCTATATTATCTCCCTTATTTACTGTACTGTGTTGTCAACGC
TGATTTGATTCTCCTGAAGAACAGcatcaaaaagaagaaacgaGAAGAGG
TGGATTACCAAgaattgattgataaacttttcACACCTTCCAATTCGCCA
CATGGAGCTGCAAGAACTTTGTTAAACCTCTTGGTCAAGATTTTATACAT
CATTGTCAACGTTTTAGGGATAGTAACTATTGATTCAGCAATCAATGGTG
AATATGTATCATTTGGAACTTCGTGGACAAAGTGGCTTCgTGAAAACAAT
TATGGAGCCCTTTGTAACAGTGACAAAGACCAAAATTGTGATCCACTCGA
GAAAACTTTTTATCTCCAATATCAATGGTTCCCACTTGGTGTTGCAGCCT
TAGCTTTTCTATATTATCTCCCTTATTTACTGTACTGTGTTGTCAACGCT
GATTTGATTCTCCTGAAGAACAGcatcaaaaagaagaaacgaGAAGAGGT
GGATTACCAAgaattgattgataaacttttcACACCTTCCAATTCGCCAC
ATGGAGCTGCAAGAACTTTGTTAAACCTCTTGGTCAAGATTTTATACATC
ATTGTCAACGTTTTAGGGATAGTAACTATTGATTCAGCAATCAATGGTGA
ATATGTATCATTTGGAACTTCGTGGACAAAGTGGCTTCGTCTTACACCTG
ACCAGCGACACGATTACACCGTACCACGAAATCCTAAAGCCGGACACTCC
CTTTTACCAGCATTCGGTCTTTGCGAGGTTGTGACAGCAGCCAATGATCT
GAAGAACACAATTTACAATAAACATACTTTCGTATGTGAACTCAGCCAAC
ATGTGTTGTACCAATATATCTTGATCATCTTATGGTCTTACACCTGACCA
GCGACACGATTACACCGTACCACGAAATCCTAAAGCCGGACACTCCCTTT
TACCAGCATTCGGTCTTTGCGAGGTTGTGACAGCAGCCAATGATCTGAAG
AACACAATTTACAATAAACATACTTTCGTATGTGAACTCAGCCAACATGT
GTTGTACCAATATATCTTGATCATCTTATGGTACATCATTGTTGCTGGTA
TCATCATTTCAATAATTGGTTTCCTCATGCACATCTTCAGTGATTTTACT
GCTGCTTTCTGCATTGGTTTCCAAGGTACATCATTGTTGCTGGTATCATC
ATTTCAATAATTGGTTTCCTCATGCACATCTTCAGTGATTTTACTGCTGC
TTTCTGCATTGGTTTCCAAGGTCGTGATATCAGCACACTGTATCGTGCTT
TGAACACACGTGAACGCCAACTGTTGGACTTCGTACGCAAGAAGAACATG
CCAGTCTTCGGAGAGTTGTTGGATAAACTCTACATTGCCAAAAACATCAA
AGTCGTGATATCAGCACACTGTATCGTGCTTTGAACACACGTGAACGCCA
ACTGTTGGACTTCGTACGCAAGAAGAACATGCCAGTCTTCGGAGAGTTGT
TGGATAAACTCTACATTGCCAAAAACATCAAAcCTGATCCATTGAGTGAA
GACCCTGATCAACGAGCAGCGATGAGCCGAAAAGAACAGATGATGGCTGA
CCAAGATTATTGAcCTGATCCATTGAGTGAAGACCCTGATCAACGAGCAG
CGATGAGCCGAAAAGAACAGATGATGGCTGACCAAGATTATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:1731724..1740008 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1117-1197:8205 |
| Aaloc | 988-1116:7498 |
| Aaloc | 892-984:7037 |
| Aaloc | 697-888:6384 |
| Aaloc | 298-693:5670 |
| Aaloc | 148-294:4900 |
| Aaloc | 1-147:1 |
|
