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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000055_pilon:183291..185831+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034712.2 ID=XLOC_034712.2|Name=XLOC_034712.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2541bp|location=Sequence derived from alignment at sc0000055_pilon:183291..185831+ (Clytia hemisphaerica_ch_hm2_pilon)
GGGGACCCATCACCTCCTCAGAAAAAGAGTAAAGTTGGTAAGTGTTGTCA
TATGTTTTTAGTATACATTGTATGATTTCTTATTACTGAACTGAAAGGTT
TGTAAATCTAATAGTAGGTCCATATCAGTGGTTTTTCACTGTCTGCTAGT
TTGTTTTGACCTtctttaccaaataaattaataataataataataataat
agctaTTATATTTTCCTTGGCTCTGTTAAAAGCATGAGATAAAACGGaat
taattttgttttcaagctTCCAGATCACAATCACAAAGAAAGTTTTCAGA
TGATCAGGGGAAGAGAAAAAACTATGGTAAAGCCTTATCCTTGTAAGGTT
GTAATTTTTGGTTGCATTCTAGTTGCACCATCATGctcattaaaaagata
tttgcgatattatcctaacaatatttgaaaagaattaatagtggaaaatg
aaaattaaagaaaaaatgaactttttgtagaattgaattacaatgaccat
ttccacgattttttacacaattttcattttcatttttcaatactttttgg
aataacttttATAAGATATGATATTCCACCATTAAATGTCTTTTCAAGAG
AACAAATCGACAATTCAATTCTGGCTCTCTAAAGTTACATCCAGTTATAG
TCACTGTAGAGTGTTTTGAGATTAACTCATTTTTTAACATACTGAcaata
ttaagcagatattcaataggtaaaagttgtaGAGTGTAGGAACTATTCAA
TGACTGTTTTTGCCTACgggtatataataaaataagttaaccctttcagt
cccagtttttttttacctcaaaaaagaattatttcaatAAACGTCATAGA
ATTATTTTATTGTAGCCTTTTGGAAGCTCTAAATTGACTACTTGTTATCC
TCATAATTTTGACAACTTCAGTCTTTCATTTTAGAAGAATCACAGTtcat
ttctttgtttgattttattttaggCGCCCACAAAGTTGATTCAGATGATG
ATTCATCAGACAGTGAAAGTTCTGAAAGTAAGTTACAtgttttaaccttt
ttttaaatctattacATCTtttttttGATTAACTTGCCCTAGGATTGAAT
TATAGACTAAACTGGATGCTGACTTTTTAAATTGTTAAATACACTAGATA
TTTTGACAAGATTACTGTCATTATTTTGCTTTACTTTTTTAAGGAGAAGA
TAATCGTACTATGAATTTGTCGACTTTGAAAAATAGTAAGTGCACTCTGA
TAGAAATGTTGGGGATGCTGGAAACAGGGGCTATACATACATACAATGCA
GGCGTCTGGGTTTAAGATCTTacaaaattttgtaaacaaaggaaCTAACT
CTATAACTATCAGTTGCTGAAAAACacaacagatttttctattTCCCCAA
ATAACTTTTGTAACCTATCTTATGACATGGGTTAAATGATTAATGATTCg
caaaataaaaagacaaagaGCAAAAATAGACGTTTCAAATGCCATTGAAA
AACTTTAGTCTATCTAATTGAAGTAATAGAACCTAATTAtagcttttctt
tttccttttatagCACATCTTTCATCACAATCGTCTCCCCTAATTCATTT
TGACGGCGGCCCATTTAATGAATCGCCACTGCCaaaaaaaaCCGTCCGAG
AAAACGAAAGTCCGAGACGGTCACCTCGTAAGCACGTAACACCAAATTCA
CATAAGTCAACATTTTCAACGAGTAGCAGTGGAAAAGAGAGAAAGAGTGA
ATCAAGGAGTGAATCAAAGAGTTCAAGAAAAAGTCTTGGTTTTGGCTCGG
GAACCAAATCAAGCGAATCAGGTATGTATGACAGTTTTTACAAAGAATTA
ATGAGCACTGTCACTTAATTCTTGACAGTGCCATCTGTTTGATTATATTC
AGCAAAAGTATTTATGGTACATTTCTTTTCCGTATgattcttttgaatga
aatggTTATAcacagaaatcttttttttaatcggTGAAAAGATATTCCTT
GTGTGCAGTATGTAGTAAACAAATGTATATTATATTATAGGAAAAGGAAA
ACATCGCAGCAAATCCGCAGCATGTAATATCCAAGACATGTACCCATTAC
CTGAAGCAGGTCAGTATGGATTtatgaatttgattttaaagttGCCTTTC
AATGAGCTAATATTTTAAGTGTACATATATATTCATCACCGTCTCTTAGC
ATGTATGATACTACTGAAATCATAATATCTATATGGCCGCCTGATGGAAG
ACTGAGATGAAACGAAAACTTTGTGTATGATAGCAACAGTTTATGAGAAA
AGCTTTTCGGTTTTAGAAAACGGGACggaatgaataaataaaaaacttta
caatCATACTCATcgatttttcagaatttcagcGGAAGCAAATAAACCTT
CTCttggaaataaaaaagttgGTGGGCGGTCCTAATAAGGACAAAATTTA
TGACCGTACAGAGAAGAAAAAGTGTGAAACCGTGGAAGAATTGTGTGCAT
ATGATAAGAAGCTGGACGATCAGAAGGAGTTTGAAAATTTG Coding sequence (CDS) from alignment at sc0000055_pilon:183291..185831+ >XLOC_034712.2 ID=XLOC_034712.2|Name=XLOC_034712.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1374bp|location=Sequence derived from alignment at sc0000055_pilon:183291..185831+ (Clytia hemisphaerica_ch_hm2_pilon)
GGGGACCCATCACCTCCTCAGAAAAAGAGTAAAGTTGGGGGACCCATCAC
CTCCTCAGAAAAAGAGTAAAGTTGctTCCAGATCACAATCACAAAGAAAG
TTTTCAGATGATCAGGGGAAGAGAAAAAACTATGctTCCAGATCACAATC
ACAAAGAAAGTTTTCAGATGATCAGGGGAAGAGAAAAAACTATGgCGCCC
ACAAAGTTGATTCAGATGATGATTCATCAGACAGTGAAAGTTCTGAAAgC
GCCCACAAAGTTGATTCAGATGATGATTCATCAGACAGTGAAAGTTCTGA
AAGAGAAGATAATCGTACTATGAATTTGTCGACTTTGAAAAATAGAGAAG
ATAATCGTACTATGAATTTGTCGACTTTGAAAAATACACATCTTTCATCA
CAATCGTCTCCCCTAATTCATTTTGACGGCGGCCCATTTAATGAATCGCC
ACTGCCaaaaaaaaCCGTCCGAGAAAACGAAAGTCCGAGACGGTCACCTC
GTAAGCACGTAACACCAAATTCACATAAGTCAACATTTTCAACGAGTAGC
AGTGGAAAAGAGAGAAAGAGTGAATCAAGGAGTGAATCAAAGAGTTCAAG
AAAAAGTCTTGGTTTTGGCTCGGGAACCAAATCAAGCGAATCAGCACATC
TTTCATCACAATCGTCTCCCCTAATTCATTTTGACGGCGGCCCATTTAAT
GAATCGCCACTGCCaaaaaaaaCCGTCCGAGAAAACGAAAGTCCGAGACG
GTCACCTCGTAAGCACGTAACACCAAATTCACATAAGTCAACATTTTCAA
CGAGTAGCAGTGGAAAAGAGAGAAAGAGTGAATCAAGGAGTGAATCAAAG
AGTTCAAGAAAAAGTCTTGGTTTTGGCTCGGGAACCAAATCAAGCGAATC
AGGAAAAGGAAAACATCGCAGCAAATCCGCAGCATGTAATATCCAAGACA
TGTACCCATTACCTGAAGCAGGAAAAGGAAAACATCGCAGCAAATCCGCA
GCATGTAATATCCAAGACATGTACCCATTACCTGAAGCAGaatttcagcG
GAAGCAAATAAACCTTCTCttggaaataaaaaagttgGTGGGCGGTCCTA
ATAAGGACAAAATTTATGACCGTACAGAGAAGAAAAAGTGTGAAACCGTG
GAAGAATTGTGTGCATATGATAAGAAGCTGGACGATCAGAAGGAGTTTGA
AAATTTGaatttcagcGGAAGCAAATAAACCTTCTCttggaaataaaaaa
gttgGTGGGCGGTCCTAATAAGGACAAAATTTATGACCGTACAGAGAAGA
AAAAGTGTGAAACCGTGGAAGAATTGTGTGCATATGATAAGAAGCTGGAC
GATCAGAAGGAGTTTGAAAATTTG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000055_pilon | genome | sc0000055_pilon:183291..185831 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 523-687:2377 |
| Aaloc | 454-519:2043 |
| Aaloc | 196-450:1566 |
| Aaloc | 154-192:1196 |
| Aaloc | 100-150:976 |
| Aaloc | 40-96:269 |
| Aaloc | 1-36:1 |
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