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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000015_pilon:1031723..1034758+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039197 ID=XLOC_039197|Name=XLOC_039197|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3036bp|location=Sequence derived from alignment at sc0000015_pilon:1031723..1034758+ (Clytia hemisphaerica_ch_hm2_pilon)
atGGCAGAGCAAGAAATTACCGCAACAGAAATCAAGGATGAAACTCTTGA
AGAATATTACGAGCAATCCATCGTTCCACCATTCCACAGATGCTATCACA
TCAAGCCTTTTAATGTTGTTTTCTCAAAGAATTACCCCAGACATCATCAG
TttattcaagattttgaagtttttaaagatGATGTTTTCGTATCCACTTT
TCCAAAATCTGGTAATTTTTGTGAACTGCCAGAATTCCTATGAATCGTTT
TGTTTTAAGGCATGCGGAGGTTTATTTTGTCCTACTATCAACCATTATTT
TCTTTCCATGTATTAGCTTTCAAATCCATACATTAGGTCACAGTAGGTCA
ATGAAATACAGTctacgttcgttcgttcgttcgttcgttcgttcgttcgt
tcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttc
gttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgt
tcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttc
gctcttgatattcatgatgtaatctttgcgCCTAAACAACTTTGCCGCCa
ttatttgtggtaaaaaatttgGCCAGCTAacctattttgtattgaaaccg
GGGGTTCACGAAAAAGAAAGCCTAATAATTTGTGATGTAGTATGATAGAA
TTATATatctttttaaaatctattGTAGATAATTTAATGAAAgagttttt
tcttcgttttggagtatttggacttctgcattaatcttttcctttttctt
tcggGGGTCCTTGCGTTGAAAACACCAAAAATGGCGGCCAAATGTTATGA
CTTGAAGTGTCAATCAACGAAAATATTACATCATGAACATCGtgaattca
ttcattcattcattctcaaaatttgataataCTTCATCATCACTTTCTAC
ACGcatttttgttttcaggaaCTCGTTGGCTTCAAGAATTAATTTGGTGT
ATGCGTCATAAAAATGGAATCGAAAAAGCGAAATCCAAAGATCTTGATGA
GAGGGTACCCCATTTTGAGTAAGCCAGATTTCATAATATTATGATAAGAC
TACAATTATACAACATCATTTCTAGCATTGATTTCAAACCCCCAAAGAGA
CTATAGATTTGAAACTCTtgaatgggaaatgaagccacttatctCCCACA
AACGCCAGATTAAGAGTAAAACCCAtcggtaaatttcaaaaataattgcc
gcttaaaacaaagaaagggctTGATTCAATCGTCATTCTAAATGCTGTGA
AAATCTAAAGGCTTCACTTTCTCTTGCTccagaaaggttgaagattcctc
tctggCCTCTTTAGATTCAATGATTTCAAGACACCAAAATTATTATCAGT
GGGTCATTACTTCCGCAGAGCTTTTTGGAATGATTCAAGTTTTCTGACGT
TACTGCTTTTTTCATTTAGACTCCCTTTTGTAATGGACAGCAAGTCTATT
GAAGAGGATAAATCATACCTCCTTAATGGAATAAACAACCTCTCTCGACC
AAGAACGTTGAAAACTCATCTACCTTTTCCGATGCTACCGAAAGGAGTAC
AAGAGAAGGGTGCtaaggtaaattttattgacttatcaaattccaaacat
tttccttgaaaaaatcAGCTAAGGCAGGCTCcaaaattcatttctttcgt
GGTTTTAAGCTCAATAATCCTTGCAATCTTTTAAACATGTTTGCTTAATG
CACGTGTCGAATTCCCTTAGCCATGCCATCTCTGAAATCCGAGTCCGAGT
CGTGTTCTTAAGTTTTCTTTAAGccgatttcttataaaaagaggcGTGTA
TTGACAATTCATTGATTGGAATAATTTTGTTTCATCTTCAGATCGTATAT
TGTTATCGCAACCCTAGAGATACAATGTTGTCATTGTTTAACTTCATGAA
ACTCATACAAAATTACACTGGCACAATGGAATTGTATTCCGATGTCTTCC
TCAAAGGCCTCACACCTTATTACTTACCCTACTTTTCTCAAGTTTTGGGA
TATTGGAATCGACGTTCCCAAGAGAATCTCTTGGTACTATGTTATGAAGA
AATGCAGAAAGATTTGCCATCAGTTGTTCgaaaaattgcttcatttttgg
aCATTGAAATGACAGATGaagaagttttgaaattatgtCATCATACTTCT
TTtgatcaaatgaaaaagaaccCTCATGTCAACGTATTGAAGGTAttttt
ttGTAAAGGCGAATTGTTTTGTGTATTTATATAGcagattttctaaactt
tttaaacgcattactctcgggtacctaatagccggggggttggaataagc
aggggggttggaaaaaatctcaaaatttaataagcgggggggttggaata
aaaatgtcatggatggaaaatgtttgaaaaggaggctaatacagcagaat
taagacaaaaaagggaacttttcccaaaaattaataagcggggggggggg
ttggaataagaatgtcctgggtggaaaattttcgaaaaattaattagcag
ggggggacggctattaggtacccgagagtagttgcATATTCCCGTAGTTT
GAATCGcagactttaaaaaaaaatttgtctctaaaaatatttttcgctag
aggatgaacaGAAGCCTAACTTTCCCGGGGCCCTTAGAGACAGTCATGTC
CTATAGAATTATAGACTTGGTATAAACCTACTTTGGCCCAGAAGATTTTC
CTTTTagatcacacccctgtctcggtgACTTAGTAGTGGGGTTAAAACGA
AAGGGACTTATTCAGATAGCAATGGTAAGATCGTATCGTGTAAAGAAACA
TTAGAAACATTTAGAAGTTTCTTTTCTTAATTCTAGGGACTAAAAATGTA
CGACGGACAATATTTGAACAAAGGAAAAGTTGGACAATGGAAAGATCACT
TCAGTGAAGAATTGATCCAAAAATTCGAACTATTTGAAAGAGAAGGATTA
AAGGGAACTGATCTGGAGTTTGTTTTCGAATTATAA Coding sequence (CDS) from alignment at sc0000015_pilon:1031723..1034758+ >XLOC_039197 ID=XLOC_039197|Name=XLOC_039197|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1920bp|location=Sequence derived from alignment at sc0000015_pilon:1031723..1034758+ (Clytia hemisphaerica_ch_hm2_pilon)
atGGCAGAGCAAGAAATTACCGCAACAGAAATCAAGGATGAAACTCTTGA
AGAATATTACGAGCAATCCATCGTTCCACCATTCCACAGATGCTATCACA
TCAAGCCTTTTAATGTTGTTTTCTCAAAGAATTACCCCAGACATCATCAG
TttattcaagattttgaagtttttaaagatGATGTTTTCGTATCCACTTT
TCCAAAATCTGatGGCAGAGCAAGAAATTACCGCAACAGAAATCAAGGAT
GAAACTCTTGAAGAATATTACGAGCAATCCATCGTTCCACCATTCCACAG
ATGCTATCACATCAAGCCTTTTAATGTTGTTTTCTCAAAGAATTACCCCA
GACATCATCAGTttattcaagattttgaagtttttaaagatGATGTTTTC
GTATCCACTTTTCCAAAATCTGgaaCTCGTTGGCTTCAAGAATTAATTTG
GTGTATGCGTCATAAAAATGGAATCGAAAAAGCGAAATCCAAAGATCTTG
ATGAGAGGGTACCCCATTTTGAgaaCTCGTTGGCTTCAAGAATTAATTTG
GTGTATGCGTCATAAAAATGGAATCGAAAAAGCGAAATCCAAAGATCTTG
ATGAGAGGGTACCCCATTTTGAACTCCCTTTTGTAATGGACAGCAAGTCT
ATTGAAGAGGATAAATCATACCTCCTTAATGGAATAAACAACCTCTCTCG
ACCAAGAACGTTGAAAACTCATCTACCTTTTCCGATGCTACCGAAAGGAG
TACAAGAGAAGGGTGCtaagACTCCCTTTTGTAATGGACAGCAAGTCTAT
TGAAGAGGATAAATCATACCTCCTTAATGGAATAAACAACCTCTCTCGAC
CAAGAACGTTGAAAACTCATCTACCTTTTCCGATGCTACCGAAAGGAGTA
CAAGAGAAGGGTGCtaagATCGTATATTGTTATCGCAACCCTAGAGATAC
AATGTTGTCATTGTTTAACTTCATGAAACTCATACAAAATTACACTGGCA
CAATGGAATTGTATTCCGATGTCTTCCTCAAAGGCCTCACACCTTATTAC
TTACCCTACTTTTCTCAAGTTTTGGGATATTGGAATCGACGTTCCCAAGA
GAATCTCTTGGTACTATGTTATGAAGAAATGCAGAAAGATTTGCCATCAG
TTGTTCgaaaaattgcttcatttttggaCATTGAAATGACAGATGaagaa
gttttgaaattatgtCATCATACTTCTTTtgatcaaatgaaaaagaaccC
TCATGTCAACGTATTGAAGATCGTATATTGTTATCGCAACCCTAGAGATA
CAATGTTGTCATTGTTTAACTTCATGAAACTCATACAAAATTACACTGGC
ACAATGGAATTGTATTCCGATGTCTTCCTCAAAGGCCTCACACCTTATTA
CTTACCCTACTTTTCTCAAGTTTTGGGATATTGGAATCGACGTTCCCAAG
AGAATCTCTTGGTACTATGTTATGAAGAAATGCAGAAAGATTTGCCATCA
GTTGTTCgaaaaattgcttcatttttggaCATTGAAATGACAGATGaaga
agttttgaaattatgtCATCATACTTCTTTtgatcaaatgaaaaagaacc
CTCATGTCAACGTATTGAAGGGACTAAAAATGTACGACGGACAATATTTG
AACAAAGGAAAAGTTGGACAATGGAAAGATCACTTCAGTGAAGAATTGAT
CCAAAAATTCGAACTATTTGAAAGAGAAGGATTAAAGGGAACTGATCTGG
AGTTTGTTTTCGAATTATAAGGACTAAAAATGTACGACGGACAATATTTG
AACAAAGGAAAAGTTGGACAATGGAAAGATCACTTCAGTGAAGAATTGAT
CCAAAAATTCGAACTATTTGAAAGAGAAGGATTAAAGGGAACTGATCTGG
AGTTTGTTTTCGAATTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000015_pilon | genome | sc0000015_pilon:1031723..1034758 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 811-960:2887 |
| Aaloc | 460-810:1892 |
| Aaloc | 313-459:1471 |
| Aaloc | 214-309:971 |
| Aaloc | 1-210:1 |
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