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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000288_pilon:214020..219490- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042084 ID=XLOC_042084|Name=XLOC_042084|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5471bp|location=Sequence derived from alignment at sc0000288_pilon:214020..219490- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGAGTGACCTGCATAATTTACCGAACGATTCGAGCAGTGGAAGCTC
ATCACCTCATTCGAATACAAGTCACGAAGAACCTTTAGAGATGGACCAAG
CTTCAAACATGCTTCATCAAAAAGTCGTCTACAATTTCTCCATACCGGAG
TTCATCAATCACGAACGCATTGATCGTGACGACCGGGAGCGATCGCGTGC
TGAAGTGCGCAGGAAAAGAAACCGCTTAGCGCGCCATCAACAACAGCACC
CGCCTCAGGATCAACGTGATTCTGAAGAGCAATCAGAGGATAGAGAGCCT
TCAGAACGAATCGAAATTCAAGACTCTCCTGTTATTGTGCACGCGACCAA
GAAACGGCGTCGCGCGGCCGCGGCGGTTGAAGAAGATGACGGCGATGATG
ATTGTCATCGGAGACGTCAGCATGTTCCGGTGATTGACTTAACCGGCGAC
CACGACAGCCCGCATTCTGATACCGAAGGGAGAACCAACAGTCGAAGGTA
CGAACTCTTTTTTATTTTCACCATCACGTAGGTCCTCCAATGGATAGGAC
TTTAACCAAGTTGAATGGTTGAAATGTTAACTTTTAGAAAACCTTTTCAA
CAAATGATTCGTGTCTTGTCAAGCTGTCAACTATTTCTCATTTTGACTCG
ACTCTAAAGTTTTATTTTTTTATTGGATTTAACATCTTTGCACTTTAAAG
CTAGCCAAAAGGGAAGTTTATATCGCACTTTTGGGATATTCAGAACGATA
AGTCTTATCTTTGCCAGGCCTGCCTTTAAATACAAATTTAATTAAAGAAA
GGTTTAAATTAGAGCAATAAAGCAACCATTTTATTATCTTTCTATGATTG
GTTTGGACTGAGTTATTAAAAATGACTTCCTTAAAGTGACACAATAGAAT
GAACTTTTAAGAAAAATGGTTTTAAGTTGATCAGATATAAAACCATTTTC
TACTGAATAAACGGAGGCTGCTTTTTAAGAAACTTTTATGACATCGCTGC
TTAAATGAGACTTTGTTAAAATTCATGAAATAACTCGAAAATTTAATGGA
AGGAAAAAAAACCGAGTTATAAATTTGAGTGTGACGTCATAATTTTCTGA
AAATGACGTCATAACTCGGGTTTTCCGTAACTCGGAAAAATAACTCGGGA
AAAATAACTCGGGTTTTCCGGGTCTCCTTTTGGTATGTGGATTAGAGACA
TTTTAAAATTCCTAGTCATTTCTTATGGAATTTGATTTCTTCTCTAAACG
GAGGAGTGTTTTTTCCTCCTTACAATTCTCTGTTTATACAGAATTTGACT
CTCCAGAGCAGAGCATAAAAGCTGTCGTCTTTTTCTTTCAAATACACAGT
AAAACAGTCTAACAGAATGACAGCGTGTTCAATGTTTAATAATTCAAAGA
AAATCTCCTCTGAGAAAGAAAAAACCTCCATGTAGTTGAGTAAGGTTTGA
GTTGAACTCACACTGGACGAGTCATCTACTCAATTCGATCGACATCATCA
TTTATGCATAGAAGTTTAACCAAGCCAACCAAATGGGGCGATTCTTTCGT
TATTTATAACCCGAATTCTTCACTGTCACATCTCTGATTAGCTGGTACCA
ATTCACCTTCATTCAAGAAAATTTAGAAATTCATCAAAAATTGAACTTAT
TCTTCTGAAGAAAATTGAATTGATGAAATATCCCGTTAAATATATTAAAA
GATTGGAAAGAAGTAAATATAGTTTTGCTGAAAGAAAAAGTTTGGGACAA
ATTTTAATGTTTGAATGTGTGATGATATTTGACCTGAGCAAGTGTTGACA
CTTTTTTGAGTTAGAAATTTGACTTTTCGAATCGATATGTCTGTTTCCAG
CTCCTTATATCGTCCTTATCGTGATCGCCATGGTTTCGGACAACTCTTCT
CCGATTTCGAACGAAGTCATTACTTATCGCGCGACCGTCACGAACGTCTC
AACCGATTCTTCTATCGTTCGCCGTCCATGCAACGACTTCATCGTATGCA
ACAGTTACGGCGCCGACACGAAACGCACCGGCATTCACACCGTTTGGCAG
GTGAAGATATTTTGTTCCCTGAAAGAAGTGTTCGGGAAAATGAACGAACG
ACGAATGAAGAACCGCACGAAGGAACGAATGCAGATGACTCAGTTCTCAT
CGTCAATGAGGTATATCTTTCATACTATGTTTTTTTTTACTTTTGACAAT
ATCTATCTACCCTAACGCCACCGGGTTTTCTGGTTTGTTACCTGATTTAT
TGAGCCACACATGCACTTGTTGTTAAATTCCCTATAATTCTTACAATATT
CCATTTCCGGCTCCATAATAACACACACAATAATATTTGAACGAATTAAA
GTTGTTTATAACGATTTCTTTCTGTGATGATTCGTGAAAGTTTTCTATAT
CATACGTTTTACTTAGGTGCGAGGAACAACGGATCTTTCGAGACCAACAC
TTGAAGACGATGAACCAACCTTCCCTCCAAACCTCTCTTCTAGACCAGAC
CCAATGGTAAGACTTCCTATACTGATAATTCCCAGTAGGAATGGAAACCG
TCGGAAAATACAGCCACTTTGTCACCTACAGATGGGGGTCTTTAACTTCT
TGTTATTTCAGGGTCAAATTTGATTGTAGGAATGCAACAAAATTTTTACG
AACCTTTTAGAATCGGGAATCGGTACCTATGTGGAGTTTTTGATGGATTT
TTGTATCTCCTTAGAAACGGTTACTAAGAAACTTAACTGACTCTGCCAAA
ACAAAATGACCTATACGACCCGTACATTTAGGCGGAGTAAATTGAAAATA
AAACTATTGTTAATCGTAACATCTATTATTTTCATCAAAGCAACCTCCGC
ACGGACCTCACTCGTCGCTCGATTTGATCGAAGACCGACTCCGCATCCTT
CGTGAAAGACGCCAAATGCATGAAGCCATGACACGAGTAAACCCAATCGA
CTCGGTACGCGAACGTGAGGAAATCGCTCAACCGTCCTCAGGCGTTCATG
AACGAATGGGATTACGTAATCGTAACCGGCCAACCAATAACAATCGAGAA
TCGAATGAAGGAACAGCTAATGAGAGTCGAGCAAATGAAGAGGAACAGCG
ACCGAGGGAAAACCTCCGCCAAAGCGAACGAAACATGACCGCGCGAATGA
CCGCTTCGGATAATCTAAACCAAGAGGTAATGTTTTTTTTAGTTTGAGCA
TGCTGCTATTTGAGGGACTACTCCGAAAAAAATGAAGATGTGTGCCAGTA
GAGACTTTATTTTGAGGCTTTCTCAAAATCCCAACATTTACGACCAATTT
TGAAGGTTGTGCTGGTCAAAGTGAAAATGAGTGTACAGTAAAGAAGCTTT
CCTCCATTCAAATGAAAAGTTCTGTTTTTTGCAGGCTGCAGACAATGGTG
GTGAAGTGGAGTTTATCGGAGAGTGGAATGTACGGAACAGCCCTGCATCA
CGACAACGTCACATTCCGCCATCCCTCCTTCCCTTTCAACTTGGTGTAAG
TTCAACCTTCAAACAGTAACACACTCCTGTGCGGTGTGTGCCGAGCCTTA
ACTTTGCGCCTTTTTAACAGAAATACTGTCGTGTGTGGTGTGTGTCAAGC
CTTAATTCTGTGCCCTTTTCTAACAAAAGTACTCTCGTGTGTGTTGTGTG
CCGAGCCTTAACATTGTGCTCTGATTAACAGAAACACGCTCTGTTGTGAA
AATGCTTAAACATTTTGTTGCTAGCAAATCTGTCACTTCATTTTTCGAGT
CTTTTCTTTCAAACAATGTTTGTTTGTATGTTTGGTTCTTTAGTGTCATC
ATTGATAAACAATTTACAAATGTAGATGTCTCTTTTCTTTCGTTCCAGCA
CCCGTTACATTTACCGTTCGCGTCGTCCGAACATCGTCATCATTTCTTGT
AAGTATCTACTCTGCTTCGTGTACTGCCACTGGCCTGCTTGGTCAAACAG
ACCTGGTGGATAGTGGTAATAAGTCCTTTTATTGTCGGTACTTTAAATCG
TTTTTAGCAAGCCAGTTGCATTTTTAGTGCATCTTCTTGTGGCAAAATTA
TCCCTCCGCTTGATGATAATAAAATATTGATTGACTTTTCAGGAGATTTC
TTCCGACTGTCACACCTCCACGTCTCCATCATTTGTACCAAGAAAATTAT
GAAGCTCTTCTCAACCTTGCCGACACTCTCGGTCCAGGGAAACCACGTGG
TCTTGACAAAACAGGTAATTCGTTGTCGGTGGTTGTGTTTGGGTTGATAC
AATTGACTCTAGTTTATTTAAACTCAAACCAAAAAATTGATTTTTTTCTA
TTGAAGTACAGAAAGATTTCAACTGTTCACGAGGTTTTTATCCTTGACGA
TATGACTGAAAATTAGTTTGCATTGTACTGATCTTTTGAGGCTCCTCTAA
AAACCTGAGGAGTTAATTGACTACTTTCCGACTACTTTCTGCAAGATCTG
AGGGAAAAACTCCTCTTTTATCCAGCATATTGCTTTTGATCCAAAAGATT
TATTATCAGATCGCATGTTTTTACACGGATAAGCTTCGAGAATATGGGAG
AAATAGTCAAGAAGTCAAGCATAGTGTCAAATATCTCTTTCCTTAATATT
TTGATATTCTCTCTCTCTCTTCGTGTCGTTTTGTGATGAAGATTAGATAT
TTAAACCTTCTCCTCATCTTATCAAGGTTACGACAAATTATTGAAAAAGA
AAGAGGAAAGAAAAAAATGATGATGATGATGAAAAGGAAAGAAAAATATA
TTTAACCTCTGTTTGCATTTAAAAAGCAAAGATGTTGTTTAAAGTATAGA
CAGCGAAAAAGGATATGATAAATATAACATCACATCTTTCGTATATGGTT
CAGCACAAAAATTTTCAATTCAAAAAAATTTCAACTTCGTCTGCCAAACT
CACTTTAAATATAAAACATGGACTCTCAAGCTACTACAACCAGTTTCACG
GATAAAATCGCAGCTTTGTCTACCATATTGATTTGTTGTCTTTCAGAGAT
CGAGCGGATTCCGTCCTTCCGCTTTTCATCGAACACGGCCAAAGAGACGA
ACGTCAAATGTGTCGTCTGCATCAGCGAGTACACTAATCGTGAGAAGTTG
AGACGTCTTCCATGTTCGCACGACTTCCATGCTAAATGTATCGATAAATG
GCTCAAGGTGGGTACAATCAACGAATTTAATTTTTTTCAAAATATTTGAG
ATCTTGACTGACGTATATTCTTACAACGTATCATACTTTTCGCTTCACTG
GTTTTGGGCCGGGCTATTAATAAAATAAGGTTTACGGCCATAACGATTAC
TTTCGCGATTCAAATAGTTGTTAGTCGTTAGTTACTGATATTTTCAAAGC
CAACGAGCGGTTTAGATTTTTCCTCATGTCATATTTATGACTCAAAATTG
TTCTTCTCTTGCAGTCCAACAAAACATGTCCAGTGTGTCGTGATGAAGTG
AAAGTTACGTCCGCCGAATGA Coding sequence (CDS) from alignment at sc0000288_pilon:214020..219490- >XLOC_042084 ID=XLOC_042084|Name=XLOC_042084|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3468bp|location=Sequence derived from alignment at sc0000288_pilon:214020..219490- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGAGTGACCTGCATAATTTACCGAACGATTCGAGCAGTGGAAGCTC
ATCACCTCATTCGAATACAAGTCACGAAGAACCTTTAGAGATGGACCAAG
CTTCAAACATGCTTCATCAAAAAGTCGTCTACAATTTCTCCATACCGGAG
TTCATCAATCACGAACGCATTGATCGTGACGACCGGGAGCGATCGCGTGC
TGAAGTGCGCAGGAAAAGAAACCGCTTAGCGCGCCATCAACAACAGCACC
CGCCTCAGGATCAACGTGATTCTGAAGAGCAATCAGAGGATAGAGAGCCT
TCAGAACGAATCGAAATTCAAGACTCTCCTGTTATTGTGCACGCGACCAA
GAAACGGCGTCGCGCGGCCGCGGCGGTTGAAGAAGATGACGGCGATGATG
ATTGTCATCGGAGACGTCAGCATGTTCCGGTGATTGACTTAACCGGCGAC
CACGACAGCCCGCATTCTGATACCGAAGGGAGAACCAACAGTCGAAGATG
AGGAGTGACCTGCATAATTTACCGAACGATTCGAGCAGTGGAAGCTCATC
ACCTCATTCGAATACAAGTCACGAAGAACCTTTAGAGATGGACCAAGCTT
CAAACATGCTTCATCAAAAAGTCGTCTACAATTTCTCCATACCGGAGTTC
ATCAATCACGAACGCATTGATCGTGACGACCGGGAGCGATCGCGTGCTGA
AGTGCGCAGGAAAAGAAACCGCTTAGCGCGCCATCAACAACAGCACCCGC
CTCAGGATCAACGTGATTCTGAAGAGCAATCAGAGGATAGAGAGCCTTCA
GAACGAATCGAAATTCAAGACTCTCCTGTTATTGTGCACGCGACCAAGAA
ACGGCGTCGCGCGGCCGCGGCGGTTGAAGAAGATGACGGCGATGATGATT
GTCATCGGAGACGTCAGCATGTTCCGGTGATTGACTTAACCGGCGACCAC
GACAGCCCGCATTCTGATACCGAAGGGAGAACCAACAGTCGAAGCTCCTT
ATATCGTCCTTATCGTGATCGCCATGGTTTCGGACAACTCTTCTCCGATT
TCGAACGAAGTCATTACTTATCGCGCGACCGTCACGAACGTCTCAACCGA
TTCTTCTATCGTTCGCCGTCCATGCAACGACTTCATCGTATGCAACAGTT
ACGGCGCCGACACGAAACGCACCGGCATTCACACCGTTTGGCAGGTGAAG
ATATTTTGTTCCCTGAAAGAAGTGTTCGGGAAAATGAACGAACGACGAAT
GAAGAACCGCACGAAGGAACGAATGCAGATGACTCAGTTCTCATCGTCAA
TGAGCTCCTTATATCGTCCTTATCGTGATCGCCATGGTTTCGGACAACTC
TTCTCCGATTTCGAACGAAGTCATTACTTATCGCGCGACCGTCACGAACG
TCTCAACCGATTCTTCTATCGTTCGCCGTCCATGCAACGACTTCATCGTA
TGCAACAGTTACGGCGCCGACACGAAACGCACCGGCATTCACACCGTTTG
GCAGGTGAAGATATTTTGTTCCCTGAAAGAAGTGTTCGGGAAAATGAACG
AACGACGAATGAAGAACCGCACGAAGGAACGAATGCAGATGACTCAGTTC
TCATCGTCAATGAGGTGCGAGGAACAACGGATCTTTCGAGACCAACACTT
GAAGACGATGAACCAACCTTCCCTCCAAACCTCTCTTCTAGACCAGACCC
AATGGTGCGAGGAACAACGGATCTTTCGAGACCAACACTTGAAGACGATG
AACCAACCTTCCCTCCAAACCTCTCTTCTAGACCAGACCCAATGCAACCT
CCGCACGGACCTCACTCGTCGCTCGATTTGATCGAAGACCGACTCCGCAT
CCTTCGTGAAAGACGCCAAATGCATGAAGCCATGACACGAGTAAACCCAA
TCGACTCGGTACGCGAACGTGAGGAAATCGCTCAACCGTCCTCAGGCGTT
CATGAACGAATGGGATTACGTAATCGTAACCGGCCAACCAATAACAATCG
AGAATCGAATGAAGGAACAGCTAATGAGAGTCGAGCAAATGAAGAGGAAC
AGCGACCGAGGGAAAACCTCCGCCAAAGCGAACGAAACATGACCGCGCGA
ATGACCGCTTCGGATAATCTAAACCAAGAGCAACCTCCGCACGGACCTCA
CTCGTCGCTCGATTTGATCGAAGACCGACTCCGCATCCTTCGTGAAAGAC
GCCAAATGCATGAAGCCATGACACGAGTAAACCCAATCGACTCGGTACGC
GAACGTGAGGAAATCGCTCAACCGTCCTCAGGCGTTCATGAACGAATGGG
ATTACGTAATCGTAACCGGCCAACCAATAACAATCGAGAATCGAATGAAG
GAACAGCTAATGAGAGTCGAGCAAATGAAGAGGAACAGCGACCGAGGGAA
AACCTCCGCCAAAGCGAACGAAACATGACCGCGCGAATGACCGCTTCGGA
TAATCTAAACCAAGAGGCTGCAGACAATGGTGGTGAAGTGGAGTTTATCG
GAGAGTGGAATGTACGGAACAGCCCTGCATCACGACAACGTCACATTCCG
CCATCCCTCCTTCCCTTTCAACTTGGTGCTGCAGACAATGGTGGTGAAGT
GGAGTTTATCGGAGAGTGGAATGTACGGAACAGCCCTGCATCACGACAAC
GTCACATTCCGCCATCCCTCCTTCCCTTTCAACTTGGTCACCCGTTACAT
TTACCGTTCGCGTCGTCCGAACATCGTCATCATTTCTTCACCCGTTACAT
TTACCGTTCGCGTCGTCCGAACATCGTCATCATTTCTTGAGATTTCTTCC
GACTGTCACACCTCCACGTCTCCATCATTTGTACCAAGAAAATTATGAAG
CTCTTCTCAACCTTGCCGACACTCTCGGTCCAGGGAAACCACGTGGTCTT
GACAAAACAGGAGATTTCTTCCGACTGTCACACCTCCACGTCTCCATCAT
TTGTACCAAGAAAATTATGAAGCTCTTCTCAACCTTGCCGACACTCTCGG
TCCAGGGAAACCACGTGGTCTTGACAAAACAGAGATCGAGCGGATTCCGT
CCTTCCGCTTTTCATCGAACACGGCCAAAGAGACGAACGTCAAATGTGTC
GTCTGCATCAGCGAGTACACTAATCGTGAGAAGTTGAGACGTCTTCCATG
TTCGCACGACTTCCATGCTAAATGTATCGATAAATGGCTCAAGAGATCGA
GCGGATTCCGTCCTTCCGCTTTTCATCGAACACGGCCAAAGAGACGAACG
TCAAATGTGTCGTCTGCATCAGCGAGTACACTAATCGTGAGAAGTTGAGA
CGTCTTCCATGTTCGCACGACTTCCATGCTAAATGTATCGATAAATGGCT
CAAGTCCAACAAAACATGTCCAGTGTGTCGTGATGAAGTGAAAGTTACGT
CCGCCGAATGATCCAACAAAACATGTCCAGTGTGTCGTGATGAAGTGAAA
GTTACGTCCGCCGAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000288_pilon | genome | sc0000288_pilon:214020..219490 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1678-1734:58 |
| Aaloc | 1519-1677:474 |
| Aaloc | 1396-1515:1379 |
| Aaloc | 1345-1392:1624 |
| Aaloc | 1234-1344:2088 |
| Aaloc | 898-1233:2632 |
| Aaloc | 808-897:3056 |
| Aaloc | 499-807:3621 |
| Aaloc | 1-495:5472 |
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