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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000057_pilon:1154826..1159862- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_031729 ID=XLOC_031729|Name=XLOC_031729|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5037bp|location=Sequence derived from alignment at sc0000057_pilon:1154826..1159862- (Clytia hemisphaerica_ch_hm2_pilon)
AACACATTAGACAAGCATCTACCTGCTAACAGTGTTGGTGCCAAGGCTGC
ATTTTTTGATGGGAAGAACAAGACAAACGGCCAATATAAACAACAAAAAA
TATCAAAAAAAAATGGACGACCTCAAAACTATCCAAAAATCGATGCGGCT
TCTTCAACTAAGCAACAAAGAAAAAGAGGCAAGCAGGCTTCAACGAGTGA
TTTGCCAAAAAAGGTAAAATTAAGTGATGGAAAGTTTGCTATAAAATCAA
AGGAGACAGAAAATTTTCAACGTTCAAGGACTAATGGAAAAGTCACATGT
GTGAAAATAGATAGTGACAACCAGCTCCCGAGTGAACAAGAACTATTTTC
TTCATGTTCAACTCGTGAAGTTATTGTCAAACGAGAAGTATTTCAATCCA
CACAGCAAGTTGACCAACAACCTAAAAATATCGTACAAACAAACAAGGTT
ACTGACCACCAAGACGCTTCAACCGAAGCACTGAATAAGGTGACAGACCA
CCAAGACGCTTCAACCGAGGCACGTACCAAGGTTACTGACCACCAAGAAG
CTTCACCCGAAGCACCGAACAAGGTGACTGACCACCAAGATGCTACAACC
GAGGCACCGAACATGGTTACTGACCACCAAGATGCTACAACTGAGGCACC
AAACAAGGTGACTGGCCACCAAGAAGCTTCACCTGAAGCACCGAACAAGG
TGACTGACCACCAAGATGCTACAACTGAGGCACCGAACAAGGTTACTGAC
CACCAAGATGCTACAACTGAGACACCGAACAAGGTGACTGACTACCAAGA
TGCTACAACTGAGGCACCGAACAAGGTGACTGACCACCAAGATGCTACAA
CTGAGGCACCGAACAGGGTGACTGACCACCAAGATGCTTCAGCCGAGGCA
CCGAACAAGGTGACTGACCACCAAGATGCTTCAGCCGAGGCACCGAACAA
GGTTACTGACCACAAAGAAGCTTCAACCGAGGCACCGAACAAGGTTACTG
ACCACAAAGAAGCTTCAACCGAAGCACCGAACAAGGTTACTGACCACCAA
GAAGCTTCACCCGAGGAACCAAGCAAGATTACTGACCACCAAGATGCTAA
AACTGAGGCTACAACTGAGGCACCGAACAAGGTTACTGACCACCAAGATG
CTACAACTGAGGCACCGAACAAGGTGACTGACCACCAAGATGCTACAACT
GAGGCACCGAACAAGGTGACTGACGACCAAGATGCTTCAACCGAGGCACC
GAACAAGGTTACTGACCACCAAAATGCTACAACTGAGGCACCGAACGAGG
TTACTGACCACAAAGAAACCTCAACCGAAGCACCGAACAAGGTGACTGAC
CACCAAGATGCTTCAACCGAGGCACCAAGCAGGGTTACTGACCACCAAGA
AGCTTCACCCGAGGAATCAAGCAAGGTGACTGACCACAAAGATGCTACAA
CTGAGGCACCGAACAAGGTTACTGACCACAAAGAAGCTTCAACCGAAGCA
CCGAACAAGGTTACTGACCACCAAGATGCTACAACTGAGGCACCGAACAA
GGTTACTGACCACCAAGATGCTACAACTGAGGCTACAACTGAGGCACCGA
ACAAGGTTACTGACCACCAAGATGCTACAACTGAGGCATCGAACAAGGCT
ACTGACCGCCAAGATGCTACAACTGAGGCTACAACTGAGGCACCGAACAA
GGTTGCTGACCACCAAGATGCTACAACTGAGGCACCAAACAAGGTGACTG
ACCACCAAGATGCTTCAACCGAGGCACCGAACAAGGTTACTGACCACAAA
GAAGCTTCAATCGAGGCACCGAACAAGGTTACTGACCACAAAGAAGCTTC
AACCGAAGCACCGAACAAGGTTACTGACCGCCAAGATGCTACAACCGAGG
CACCGAACAAGGTTACTGACCACCAAGAACCTTCAACCGAGGCACCAAAC
AAGGTAACTGACCACCAAGAACCTTTAACTGACCACCAAGAACCCTCAAC
CGAGGCACCGAACAAGGTGACTGACCACCAAGATGCTACAACTGAGGCAC
CAAACAAGGTTACTGACCACCAAGAACCTTCAACTGACCACCAAGAACCC
TCAACCGAGGCACCGAACAAGGTGACTGACCACCAAGATGCTACAACTGA
GGCACCAAACAAGGTAACTGACCACCAAGATGCTACAATCGAGGCACCAA
ACAAGGCTACTGACCACCAAGAACCTTCAACCGAGGCACCAAACAAGGTT
ACTGCCCACCAAGAAGCTACAAGCAAGGCACCGAACAAGGTTACTGACCC
TAAAGAAGCTTCACCCGAAGCAACAAGCAAGGTAACTGACCACCAAGAAC
CTTCAACCGAGGCACCGAACAAGGTTACTGACCACCAAGATGCTACAATC
AAGGCACCAAACAAGGCTACTGACCACCAAGAACCTTCAACCGAGGCACC
AAACAAAGTTACTGACCCTCAAGAAGCTTCACCCGAAGCAACAAGCAAGG
GAATGGTCCACGAAGAAGTGTTGGTCGAGATGCCAAATAACGACACTAAA
CAAGGAGAAATTGTTGTCAAAGTGCAGGTCAACGATGCCGATAGTCAAAA
AATATTGATGGATGGACCCAACAAAGATATCACAATCCCAAGAAAAACCA
CCTCGATGGTAACAATAACCCAACAAAAACGCCATACCACTTTTGTCAGA
CGAAGCCAAAGTACACCCGATATGTTAGATTTTTTTCTTATGAATACTCC
TCAAGATAAAAGTCCAACGGTTAAAGAATTATTGATCCGATTGGAAAAAG
ACGCTCAAAAGACGTTTAAACGACGATCAAAAGAAGTTTCAGAGGAGAGT
AAGGATAAGATGGAATTACTAGTCTCTTCCAGTGTAGCTGCGATGGTGGC
GTCTGAAGATGAAATAAAAAGAACATTAGCAGATGCGGTGAAAGCCAAGA
AACGTCTTTCGACCGACATATTGCTTTTGAAAGAGGTGAGCGACTTCTTG
ATTTTTCTTTAGAAACGGTTAGACCTATTAAGGAATAACATCACCAATGA
TTATTAAATACGAAAGATTCGTATTTTGATGTTAGGGAATAACATCACCA
ATAATTATTAAATACGATAGATTCGTATTTTGATGAGACATAATGAATCG
ATGACGTTAATAAGTAAAGAATAGTACGGGGGACTTAAATGAAATGCTAT
GAACATTTGGCTCCGACCGCCCATGTTTTTTATAGGCATTGCACTTATAA
GCATGTCTAGGCTCAGATATGGGGAAAAATTAAGCATATGGCAAGCATTG
CTTGAGCCTACAAAAAATATTTTTTTCCTGATTTTGACTATTTTTTTGCT
GGAATTTAACGGATTTTCAGTATTTCCCTAAATTTATGCTTTAGATTTAA
GCGGGGATGCTTAAATCTAAAGCATAAGCATTTTTCAGCTTTATTAAGCT
TTCGACCTAAGCATCTCTGAGCCTGTTTTCAGATTTTTGTATGCTTATAA
GAAAAAAACATGTATACTGATCCAAATACAGTTGGCTAATTTTGGAATGC
AGAGTGCTTTTCTTGTCAAACAATCGCTCAGTCTAGGAGAAATTTTCCTT
TAGAATAGGTAACAAAGAAACTTGACCAGGGTTATACGTTAAATCAAGTG
AGCCCCTTCTTTTCATAAAACTTCTAGTCTCACTTTCTCAATATTTGTCT
TAAATGTCATAAATATTACCAATCCCATCCCCCCATTTATGGTTCTGGCC
TTCGTGATAAATCTATTTTTTGATATTCTTTTCTGCAGCAACTTTCACAA
GAGAAAAGAAAAACGATGAAGAACATGAAGGAGAACGTGATAATGGCCAT
CCGAAATAAGTTACATATGAAAGGTAAATCCAAAAGCGCACTCCAAATGG
AAGAAAAACAACAAAAGATTAGAACATTGGAGAAAGAATTGCTGGATAAG
ATTGCAATTCTTAAGTATATGGGAGTTGATCATGAACACGTCCAGAATGA
ACATAAAGAGGTTGCCAAGGCTGACAAATGTACGGTACGGAGTACTGTGA
ATAACAATGGTCTTCCTAAGGCAGGTAAAATGGACAGCACACAAGGCAAA
TCAAAGGTTCATACTGGATTGGGAGCACCTCCCCGTGATAATGTTATACA
GAATAAGTGCAAAGGCCGCAGACCGATGAAATCGCTTTCCGAACCATGGG
TTCAATCAGAGCCCTTGGTGCTTGCGGAACCCTTGCCACCGCTAAAGGTT
GACGAAGTCAATGCAACGCCTGTACACTTGAAAAAACGAATTGTTTGTGA
GTTTAGCGAGTCACTTGAAGAAAGTGTAGATTTGACCAGCGAAATTATGC
AGGGCCATTGGGTACAAAATAGCCCAGACAAGGTAAACCCTGGTGATTCA
TTTCTTTGAACAATCTTTAGATACTATTAAGAACAGGTTTAGAACGGCGT
GTATTGTTCACATACAATTGTTTTTTAAACAACAGTGGTCAAACCAAGGT
TTCGTCTAAGACGGAAAATGGATTTTACACATCAAATTAGCACATATTCT
TGAGCTTTTAGTGAATTAAAAAGAATTTCAAAAAGGGAAAGCCTCTTTGT
ATCCACTAAAGCACTTTTACTAATGAATCAAAACTCACTTTGACTTATTG
ATCACTTTTTGAGATTTAAAACTAAATAAATCTTTTTATTTTTCCCAGGA
CATGAACCGTATGCGAAAAATGAATGCTGAGATATCAGAGATAAATTGTC
GATACATCAAGTTGAGGAGAAACTTTGAAGCTGTATCGAACTGCCTTGAA
GAAACCAAGGTTAAAAACCAACGATTAAAATCTAAATACGAGACCGCTTA
TTCGGAGCTTCAAGAGCGTGACGCGGAAAGAGCTGAGAAAAAGAAACGCA
GCCTCGGCCGACGATTCCGAAAAATTTTCGGCTGCGCCTCCGCACGAAGC
GACGCCGCTCATAGTAGCGATTTAGACGATATGTATGTACAATCTTCATC
ACAACCAGACGCAGATGATATGTGCACTCAATCTACG Coding sequence (CDS) from alignment at sc0000057_pilon:1154826..1159862- >XLOC_031729 ID=XLOC_031729|Name=XLOC_031729|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5694bp|location=Sequence derived from alignment at sc0000057_pilon:1154826..1159862- (Clytia hemisphaerica_ch_hm2_pilon)
AACACATTAGACAAGCATCTACCTGCTAACAGTGTTGGTGCCAAGGCTGC
ATTTTTTGATGGGAAGAACAAGACAAACGGCCAATATAAACAACAAAAAA
TATCAAAAAAAAATGGACGACCTCAAAACTATCCAAAAATCGATGCGGCT
TCTTCAACTAAGCAACAAAGAAAAAGAGGCAAGCAGGCTTCAACGAGTGA
TTTGCCAAAAAAGGTAAAATTAAGTGATGGAAAGTTTGCTATAAAATCAA
AGGAGACAGAAAATTTTCAACGTTCAAGGACTAATGGAAAAGTCACATGT
GTGAAAATAGATAGTGACAACCAGCTCCCGAGTGAACAAGAACTATTTTC
TTCATGTTCAACTCGTGAAGTTATTGTCAAACGAGAAGTATTTCAATCCA
CACAGCAAGTTGACCAACAACCTAAAAATATCGTACAAACAAACAAGGTT
ACTGACCACCAAGACGCTTCAACCGAAGCACTGAATAAGGTGACAGACCA
CCAAGACGCTTCAACCGAGGCACGTACCAAGGTTACTGACCACCAAGAAG
CTTCACCCGAAGCACCGAACAAGGTGACTGACCACCAAGATGCTACAACC
GAGGCACCGAACATGGTTACTGACCACCAAGATGCTACAACTGAGGCACC
AAACAAGAACACATTAGACAAGCATCTACCTGCTAACAGTGTTGGTGCCA
AGGCTGCATTTTTTGATGGGAAGAACAAGACAAACGGCCAATATAAACAA
CAAAAAATATCAAAAAAAAATGGACGACCTCAAAACTATCCAAAAATCGA
TGCGGCTTCTTCAACTAAGCAACAAAGAAAAAGAGGCAAGCAGGCTTCAA
CGAGTGATTTGCCAAAAAAGGTAAAATTAAGTGATGGAAAGTTTGCTATA
AAATCAAAGGAGACAGAAAATTTTCAACGTTCAAGGACTAATGGAAAAGT
CACATGTGTGAAAATAGATAGTGACAACCAGCTCCCGAGTGAACAAGAAC
TATTTTCTTCATGTTCAACTCGTGAAGTTATTGTCAAACGAGAAGTATTT
CAATCCACACAGCAAGTTGACCAACAACCTAAAAATATCGTACAAACAAA
CAAGGTTACTGACCACCAAGACGCTTCAACCGAAGCACTGAATAAGGTGA
CAGACCACCAAGACGCTTCAACCGAGGCACGTACCAAGGTTACTGACCAC
CAAGAAGCTTCACCCGAAGCACCGAACAAGGTGACTGACCACCAAGATGC
TACAACCGAGGCACCGAACATGGTTACTGACCACCAAGATGCTACAACTG
AGGCACCAAACAAGGCTACAACTGAGGCACCGAACAAGGTTACTGACCAC
CAAGATGCTACAACTGAGGCACCGAACAAGGTGACTGACCACCAAGATGC
TACAACTGAGGCACCGAACAAGGTGACTGACGACCAAGATGCTTCAACCG
AGGCACCGAACAAGGTTACTGACCACCAAAATGCTACAACTGAGGCACCG
AACGAGGTTACTGACCACAAAGAAACCTCAACCGAAGCACCGAACAAGGT
GACTGACCACCAAGATGCTTCAACCGAGGCACCAAGCAGGGTTACTGACC
ACCAAGAAGCTTCACCCGAGGAATCAAGCAAGGTGACTGACCACAAAGAT
GCTACAACTGAGGCACCGAACAAGGTTACTGACCACAAAGAAGCTTCAAC
CGAAGCACCGAACAAGGTTACTGACCACCAAGATGCTACAACTGAGGCAC
CGAACAAGGTTACTGACCACCAAGATGCTACAAGCTACAACTGAGGCACC
GAACAAGGTTACTGACCACCAAGATGCTACAACTGAGGCACCGAACAAGG
TGACTGACCACCAAGATGCTACAACTGAGGCACCGAACAAGGTGACTGAC
GACCAAGATGCTTCAACCGAGGCACCGAACAAGGTTACTGACCACCAAAA
TGCTACAACTGAGGCACCGAACGAGGTTACTGACCACAAAGAAACCTCAA
CCGAAGCACCGAACAAGGTGACTGACCACCAAGATGCTTCAACCGAGGCA
CCAAGCAGGGTTACTGACCACCAAGAAGCTTCACCCGAGGAATCAAGCAA
GGTGACTGACCACAAAGATGCTACAACTGAGGCACCGAACAAGGTTACTG
ACCACAAAGAAGCTTCAACCGAAGCACCGAACAAGGTTACTGACCACCAA
GATGCTACAACTGAGGCACCGAACAAGGTTACTGACCACCAAGATGCTAC
AACTGAGGCACCGAACAAGGTTGCTGACCACCAAGATGCTACAACTGAGG
CACCAAACAAGGTGACTGACCACCAAGATGCTTCAACCGAGGCACCGAAC
AAGGTTACTGACCACAAAGAAGCTTCAATCGAGGCACCGAACAAGGTTAC
TGACCACAAAGAAGCTTCAACCGAAGCACCGAACAAGGTTACTGACCGCC
AAGATGCTACAACCGAGGCACCGAACAAGGTTACTGACCACCAAGAACCT
TCAACCGAGGCACCAAACAAGGTAACTGACCACCAAGAACCTCTGAGGCA
CCGAACAAGGTTGCTGACCACCAAGATGCTACAACTGAGGCACCAAACAA
GGTGACTGACCACCAAGATGCTTCAACCGAGGCACCGAACAAGGTTACTG
ACCACAAAGAAGCTTCAATCGAGGCACCGAACAAGGTTACTGACCACAAA
GAAGCTTCAACCGAAGCACCGAACAAGGTTACTGACCGCCAAGATGCTAC
AACCGAGGCACCGAACAAGGTTACTGACCACCAAGAACCTTCAACCGAGG
CACCAAACAAGGTAACTGACCACCAAGAACCTGCAACAAGCAAGGGAATG
GTCCACGAAGAAGTGTTGGTCGAGATGCCAAATAACGACACTAAACAAGG
AGAAATTGTTGTCAAAGTGCAGGTCAACGATGCCGATAGTCAAAAAATAT
TGATGGATGGACCCAACAAAGATATCACAATCCCAAGAAAAACCACCTCG
ATGGTAACAATAACCCAACAAAAACGCCATACCACTTTTGTCAGACGAAG
CCAAAGTACACCCGATATGTTAGATTTTTTTCTTATGAATACTCCTCAAG
ATAAAAGTCCAACGGTTAAAGAATTATTGATCCGATTGGAAAAAGACGCT
CAAAAGACGTTTAAACGACGATCAAAAGAAGTTTCAGAGGAGAGTAAGGA
TAAGATGGAATTACTAGTCTCTTCCAGTGTAGCTGCGATGGTGGCGTCTG
AAGATGAAATAAAAAGAACATTAGCAGATGCGGTGAAAGCCAAGAAACGT
CTTTCGACCGACATATTGCTTTTGAAAGAGGCAACAAGCAAGGGAATGGT
CCACGAAGAAGTGTTGGTCGAGATGCCAAATAACGACACTAAACAAGGAG
AAATTGTTGTCAAAGTGCAGGTCAACGATGCCGATAGTCAAAAAATATTG
ATGGATGGACCCAACAAAGATATCACAATCCCAAGAAAAACCACCTCGAT
GGTAACAATAACCCAACAAAAACGCCATACCACTTTTGTCAGACGAAGCC
AAAGTACACCCGATATGTTAGATTTTTTTCTTATGAATACTCCTCAAGAT
AAAAGTCCAACGGTTAAAGAATTATTGATCCGATTGGAAAAAGACGCTCA
AAAGACGTTTAAACGACGATCAAAAGAAGTTTCAGAGGAGAGTAAGGATA
AGATGGAATTACTAGTCTCTTCCAGTGTAGCTGCGATGGTGGCGTCTGAA
GATGAAATAAAAAGAACATTAGCAGATGCGGTGAAAGCCAAGAAACGTCT
TTCGACCGACATATTGCTTTTGAAAGAGCAACTTTCACAAGAGAAAAGAA
AAACGATGAAGAACATGAAGGAGAACGTGATAATGGCCATCCGAAATAAG
TTACATATGAAAGGTAAATCCAAAAGCGCACTCCAAATGGAAGAAAAACA
ACAAAAGATTAGAACATTGGAGAAAGAATTGCTGGATAAGATTGCAATTC
TTAAGTATATGGGAGTTGATCATGAACACGTCCAGAATGAACATAAAGAG
GTTGCCAAGGCTGACAAATGTACGGTACGGAGTACTGTGAATAACAATGG
TCTTCCTAAGGCAGGTAAAATGGACAGCACACAAGGCAAATCAAAGGTTC
ATACTGGATTGGGAGCACCTCCCCGTGATAATGTTATACAGAATAAGTGC
AAAGGCCGCAGACCGATGAAATCGCTTTCCGAACCATGGGTTCAATCAGA
GCCCTTGGTGCTTGCGGAACCCTTGCCACCGCTAAAGGTTGACGAAGTCA
ATGCAACGCCTGTACACTTGAAAAAACGAATTGTTTGTGAGTTTAGCGAG
TCACTTGAAGAAAGTGTAGATTTGACCAGCGAAATTATGCAGGGCCATTG
GGTACAAAATAGCCCAGACAAGCAACTTTCACAAGAGAAAAGAAAAACGA
TGAAGAACATGAAGGAGAACGTGATAATGGCCATCCGAAATAAGTTACAT
ATGAAAGGTAAATCCAAAAGCGCACTCCAAATGGAAGAAAAACAACAAAA
GATTAGAACATTGGAGAAAGAATTGCTGGATAAGATTGCAATTCTTAAGT
ATATGGGAGTTGATCATGAACACGTCCAGAATGAACATAAAGAGGTTGCC
AAGGCTGACAAATGTACGGTACGGAGTACTGTGAATAACAATGGTCTTCC
TAAGGCAGGTAAAATGGACAGCACACAAGGCAAATCAAAGGTTCATACTG
GATTGGGAGCACCTCCCCGTGATAATGTTATACAGAATAAGTGCAAAGGC
CGCAGACCGATGAAATCGCTTTCCGAACCATGGGTTCAATCAGAGCCCTT
GGTGCTTGCGGAACCCTTGCCACCGCTAAAGGTTGACGAAGTCAATGCAA
CGCCTGTACACTTGAAAAAACGAATTGTTTGTGAGTTTAGCGAGTCACTT
GAAGAAAGTGTAGATTTGACCAGCGAAATTATGCAGGGCCATTGGGTACA
AAATAGCCCAGACAAGGACATGAACCGTATGCGAAAAATGAATGCTGAGA
TATCAGAGATAAATTGTCGATACATCAAGTTGAGGAGAAACTTTGAAGCT
GTATCGAACTGCCTTGAAGAAACCAAGGTTAAAAACCAACGATTAAAATC
TAAATACGAGACCGCTTATTCGGAGCTTCAAGAGCGTGACGCGGAAAGAG
CTGAGAAAAAGAAACGCAGCCTCGGCCGACGATTCCGAAAAATTTTCGGC
TGCGCCTCCGCACGAAGCGACGCCGCTCATAGTAGCGATTTAGACGATAT
GTATGTACAATCTTCATCACAACCAGACGCAGATGATATGTGCACTCAAT
CTACGGACATGAACCGTATGCGAAAAATGAATGCTGAGATATCAGAGATA
AATTGTCGATACATCAAGTTGAGGAGAAACTTTGAAGCTGTATCGAACTG
CCTTGAAGAAACCAAGGTTAAAAACCAACGATTAAAATCTAAATACGAGA
CCGCTTATTCGGAGCTTCAAGAGCGTGACGCGGAAAGAGCTGAGAAAAAG
AAACGCAGCCTCGGCCGACGATTCCGAAAAATTTTCGGCTGCGCCTCCGC
ACGAAGCGACGCCGCTCATAGTAGCGATTTAGACGATATGTATGTACAAT
CTTCATCACAACCAGACGCAGATGATATGTGCACTCAATCTACG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000057_pilon | genome | sc0000057_pilon:1154826..1159862 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 2509-2847:340 |
| Aaloc | 1915-2508:1250 |
| Aaloc | 1417-1914:2551 |
| Aaloc | 1129-1416:3352 |
| Aaloc | 658-1125:3931 |
| Aaloc | 1-657:5038 |
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