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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000003_pilon:700962..703833+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036666 ID=XLOC_036666|Name=XLOC_036666|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2872bp|location=Sequence derived from alignment at sc0000003_pilon:700962..703833+ (Clytia hemisphaerica_ch_hm2_pilon)
CAAGCCGCTCAACAAGAACTTAGAGACCTTGAGAACCAACTAAGAGAGGT
AAACAACATACTAAGAGAAATAGACTCTGATTATGAAGCTGATGAAAACG
AAGATGCTGAGAGTGAAGATAGCTCTGAAGGAGAAGAAGAATCTGAAGAT
AATGACTCACTGGTAAATTATCATTCTCAAGAAGTCGCTCCGACAACATA
CCACTATTGCAAACCTCGTGACTGTTGGTCAAGGCCGGTCATTTCACCTT
TGTGCTTTACACGTGTTCGAGACGAAGACTGTCCAATGATACAACACCTC
AGGTAAGGGTGCGAAAGTATTTCAGATCttagaaaaatttgctttggaaA
AAGGATTCCATTACTCTTGGAAAAATAAAGTGTGGATGGGTGCGATGGGT
GAACCAAAATCAATTGTTTTCCCCTTTGAAAttgcaaattttcttttcac
attTGTTATATAAACGAGCTTATCATTTCATTCCAAGAAAAAGGAAATAT
CGATTGACGATtcttttcttacaacaataacTCAAAAGTCTcttggaaaa
tgcaaaaaatagaTTAGATTCCCTGACATTTCGTCTTGGAGGAACCCCTG
TGTATGAATCAAAATCGAAATAGCCCATTCTATTTCTCTTCCTTAGGAAA
CCTCCAACCATCTATACAGCACCTGACGATAACAGTACCATGATCGCATG
CGCATGCTCACTAATATTTGTCGTTAGCTATTTTATCGGAATGGCCTTTT
ATGCAAATTATGACAAAATCTACCAAAACATATACAACTATTAGTGAGTA
CACATCAAtagtaaaatattaaattttatgaGCGATAAAATGCTAAACCA
GCAGATTTATGAAAACATGTCGGAGATGAAAATTGAATAATATTGCAGAA
AATAGtcttcggatttttaaaagtaacttttaaaatttttctgtaaaaac
acagaaaatctcaaaataataTCTCAAAGTAAGGATCGCATCGCGATGCC
AAAACACAGCCAGAAAAAGAATCTGTTAAAAATTTGTTTACCATATCTCT
TGATTTTTCTGGTTTGCATTCCAGAAAGAAACAGTTGAAAACTCGAGTAA
AAGAGGCAGAGTGGGCCGCCACTTGAGAGGGTGTCGAATACCACATGTTC
AACAATAAAATTAATGTTTCTTGCCAAAAACAGCAACTATTTCCGACATT
TCTGCTGACTCggcatttcatcgttgaaaaaattgccaaaagagCTATAA
TTGTTATCCGTAGGGACATATGTTCTTTATCATTTACATGTGATTTGACC
TTGTAATTTTTTAATCGCAATATAAATCAAGACTTTTTCACTAACTTACT
ACATAATTTAACCTACTTTGAACAAGATCCGAGGCACACTTTTCCAGACA
TTTTATTTGCAAGTAAAAGATCTCGCCACCATAACTTCATTaatacaact
tgaaattttttgtatACCGATtatatcgttctacatctgaaAATATAAGC
TTTAACAGGCGAATTGGACTTCTTCGATCGTCAGTCAGTTTTTGAAAGAG
AAAGTTGTGCCAGCGGTGGTAGAGAGTCTATTATCATAActtttaacttt
ctttacagTCATCCACGACCGAAACCTTCGCCTATCAATATTTTCTATCT
AATCTTCAAATTCCTATTGCAATGCTTCACCAATATGTACAACTACATGA
TGGCTTTACCAGTTAAGAAACCGGCAAATATCAGACCATCCAATATTGAT
GTGTACTTTCACTTGTGGAATCTATGGATATTCTTTGCTGTATACTTCCC
ATATACATACATAGTTACGCCACAACGAAGGTAAAAGACTTGCCTTTACT
AGATAGACATCACCCGCGTTTTTATACGCAAATAACGTCTATTTCACTTT
GCGACTTTTCCGAATGTTTTGAACCCCcgtttgagcccaggttttcgggc
tccaagCATTCGAtcttttgacgtcactttaagcTTTCGAAGCTCTTCca
gtagcaaaaaaaaaatgaatttgcgCCAATACACTTGAAAGActtctatt
ttttgaaattaggaGTCGGAGAAACGGAATGAAAATTCCCCGTTTAAGGT
GCCACAAGGCACTTTTCTCCATTCTGCAAAATAACCCCTGACCCATCTAA
TTGCCAGCATCAAGAAGAGAAGCATCAAGTACTATATTGGGTATCTTTAA
TATGATCAGGGTGGGGTTCGAACCCACAATCTTGCACACCGTAGCCGGGT
GCTCTAACTTCATACTACGGTTGAATATAGAGTGATTTTCTAGTGGGGTA
ACTCCAATAACTGGGTTTTCAGGGTGCACAACATTGTTTCGATATTCATA
AGATGGACGTTGATTCGGCTTTAATTTATGACCAGCGTAACGGCAAAAAG
ATTCTAAAACCGATCAAAAAGGCTTTGCGAGTACAGGAATACCGGAAACT
CGGCTTTTAAATACCGGAAAACTGGTTGATACCGGATTCTCAGAACCCTA
ACTTATgcatttttatattatttctCTTCTCCCAATCGTATGTGTATTAt
aataatgaaaactttttttcctgtTTCTAGAATCGAACCACCTGAAGATG
AGCAAAACGAGAAAAAATACATCGTCAAACTACCGGACAACCGTGTCCGA
AATTTGGCACTTGTATTTGGAGTCATCATTAGTGTCTTACTTGTTGTTTT
CATGGTTATAACGATTTATAACTCACCCTTCTTAAGGGCATTGACGAAAG
TTCtgttcttttatctttttttcattgCATATGTGATCTCTGGTATTATC
TTAGTCTTGAGACTTTTGTATTTAACTTCGCCTCGTTTTCGCCAAATGTG
GCAAAGAAGAAATAGATCTTAA Coding sequence (CDS) from alignment at sc0000003_pilon:700962..703833+ >XLOC_036666 ID=XLOC_036666|Name=XLOC_036666|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1926bp|location=Sequence derived from alignment at sc0000003_pilon:700962..703833+ (Clytia hemisphaerica_ch_hm2_pilon)
CAAGCCGCTCAACAAGAACTTAGAGACCTTGAGAACCAACTAAGAGAGGT
AAACAACATACTAAGAGAAATAGACTCTGATTATGAAGCTGATGAAAACG
AAGATGCTGAGAGTGAAGATAGCTCTGAAGGAGAAGAAGAATCTGAAGAT
AATGACTCACTGGTAAATTATCATTCTCAAGAAGTCGCTCCGACAACATA
CCACTATTGCAAACCTCGTGACTGTTGGTCAAGGCCGGTCATTTCACCTT
TGTGCTTTACACGTGTTCGAGACGAAGACTGTCCAATGATACAACACCTC
AGCAAGCCGCTCAACAAGAACTTAGAGACCTTGAGAACCAACTAAGAGAG
GTAAACAACATACTAAGAGAAATAGACTCTGATTATGAAGCTGATGAAAA
CGAAGATGCTGAGAGTGAAGATAGCTCTGAAGGAGAAGAAGAATCTGAAG
ATAATGACTCACTGGTAAATTATCATTCTCAAGAAGTCGCTCCGACAACA
TACCACTATTGCAAACCTCGTGACTGTTGGTCAAGGCCGGTCATTTCACC
TTTGTGCTTTACACGTGTTCGAGACGAAGACTGTCCAATGATACAACACC
TCAGGAAACCTCCAACCATCTATACAGCACCTGACGATAACAGTACCATG
ATCGCATGCGCATGCTCACTAATATTTGTCGTTAGCTATTTTATCGGAAT
GGCCTTTTATGCAAATTATGACAAAATCTACCAAAACATATACAACTATT
AGAAACCTCCAACCATCTATACAGCACCTGACGATAACAGTACCATGATC
GCATGCGCATGCTCACTAATATTTGTCGTTAGCTATTTTATCGGAATGGC
CTTTTATGCAAATTATGACAAAATCTACCAAAACATATACAACTATTATC
ATCCACGACCGAAACCTTCGCCTATCAATATTTTCTATCTAATCTTCAAA
TTCCTATTGCAATGCTTCACCAATATGTACAACTACATGATGGCTTTACC
AGTTAAGAAACCGGCAAATATCAGACCATCCAATATTGATGTGTACTTTC
ACTTGTGGAATCTATGGATATTCTTTGCTGTATACTTCCCATATACATAC
ATAGTTACGCCACAACGAAGTCATCCACGACCGAAACCTTCGCCTATCAA
TATTTTCTATCTAATCTTCAAATTCCTATTGCAATGCTTCACCAATATGT
ACAACTACATGATGGCTTTACCAGTTAAGAAACCGGCAAATATCAGACCA
TCCAATATTGATGTGTACTTTCACTTGTGGAATCTATGGATATTCTTTGC
TGTATACTTCCCATATACATACATAGTTACGCCACAACGAAGAATCGAAC
CACCTGAAGATGAGCAAAACGAGAAAAAATACATCGTCAAACTACCGGAC
AACCGTGTCCGAAATTTGGCACTTGTATTTGGAGTCATCATTAGTGTCTT
ACTTGTTGTTTTCATGGTTATAACGATTTATAACTCACCCTTCTTAAGGG
CATTGACGAAAGTTCtgttcttttatctttttttcattgCATATGTGATC
TCTGGTATTATCTTAGTCTTGAGACTTTTGTATTTAACTTCGCCTCGTTT
TCGCCAAATGTGGCAAAGAAGAAATAGATCTTAAAATCGAACCACCTGAA
GATGAGCAAAACGAGAAAAAATACATCGTCAAACTACCGGACAACCGTGT
CCGAAATTTGGCACTTGTATTTGGAGTCATCATTAGTGTCTTACTTGTTG
TTTTCATGGTTATAACGATTTATAACTCACCCTTCTTAAGGGCATTGACG
AAAGTTCtgttcttttatctttttttcattgCATATGTGATCTCTGGTAT
TATCTTAGTCTTGAGACTTTTGTATTTAACTTCGCCTCGTTTTCGCCAAA
TGTGGCAAAGAAGAAATAGATCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000003_pilon | genome | sc0000003_pilon:700962..703833 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 673-963:2582 |
| Aaloc | 451-669:1610 |
| Aaloc | 304-447:648 |
| Aaloc | 1-300:1 |
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