|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000336_pilon:130041..133743+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045477 ID=XLOC_045477|Name=XLOC_045477|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3703bp|location=Sequence derived from alignment at sc0000336_pilon:130041..133743+ (Clytia hemisphaerica_ch_hm2_pilon)
ACCACCAGATTGAAGAAGAACCGAAAGAAGAGAGGGCACGTCAGTGCTGG
TCATGGCCGTGTTGGTATGTTAAAATTTTACGAGTACATAAGTGTGCCAG
AAGAGTAACTGTAATCGTAACCTTGCTTGAAAGTTTAACCTCTCCATTAA
GTATTAATTCACTGAGGAAATTTTGTTTCAATCACCTAAAGATGcttgat
ggattttttttatcatttctccAGGCAAACACAGAAAACATCCCGGTGGT
CGAGGAAAAGCTGGTGGCCAACATCACCACAGAACACTTATGGACAAGTA
CCATCCTGGTTACTTTGGTAAAGTTGGTATGAGATATTTCCACAAAACCC
TCAATAAATACCACTGCCCAACTGTCAATTGTGATAAATTATGGAGCCTT
GTCAGTGAACAAACAAGAAAGAACTATGCTGGAAAGAAAGAAGGTCCAGC
ACCAGTCATTGATTGTGTTCAGGCagtatgtttcatttatatgtCATTTG
TTTATGGAAGCATTATTTAGTTGTgtgatttcaaaaactttctttgctGA
GGCATCAGGGGGCCACTCGCACATCAATTTTTCTCATGTTagcagttggg
tgtttaagatgaAAACATCAATTATTGCTCTACACGGTAATTATTGTTGA
AAGCgttaattttttcgatgatAAATAATGATGATTCAGCATtagatctt
tgaaaaaattgttgtttttcacCCAACTGGTTAGGTTGGGCGGGTTGGTT
CAAGTAAGAGATACTAATTTTGAAGATCTATTTTTCATAGTATCTGGTCA
CTCATGCTGAAAAGgacatgtttttgattttgttttgatatgtttggtag
ttgttttttCCTGTACCATATCTTATGCTGGCTAGGCTACGTTTATCTTC
CTTTGTTTTGAgagtaaaactcctactcttcgcaatatcacgtgcgtttg
gtttgggaaacgcgaaacacgaacgcaaactacccatgtctaaacttttc
aatatatctccagaactaacagattttttgaaattctgtaaaaaggtcta
agttcttaatagttttactatgttctatgaaaaaatcataagcatcagtc
aaatactcgttcatctatttaagattgaagacaaaaatttgcgaagaaaa
ataaaccttgagcacataaaatgcttttttaaacacttttttccaccgaa
aaacaaataacttttacagacttaccttacccaaacattgaagaagcctc
tactaattaacctttccagcgcgcaacttttaaaattttcacgctgtcag
cgcgcaacattttttcagaaaatagacatgttcagttatttgatcataac
tcaagaactaggaatgtttagaaaaaaagtaaggtatccctgaaaagcta
cttaaattctacaacttttagaccaagtaccaatccaaataaaatattcc
aacaaaaatggtagcatcacgtaaaccagagttttttttcacgttttgcg
gtaatgtcactttttttgcatttttcacttctagagcaaaaaaaagtggg
gggaagttaattaaaaaatctgtctttggctatttatcaatctatacatc
attttgaagtaatataccaaaaatcagcatccagaaaaatctgtatgtgt
cacaccagcctcccaaatatcggtcacttttgccaaaaatcacgattttc
ggctaaaaaaatccaatatatacaattttgaagtattttgatgataatgt
gtttccagaagcagctacaacatcaaaaatggtgtaaaagtattccccaa
ctatctaaacaacactttcagtcagtattcttagctcctgaagcttttga
agggtattggctaccgtgaaactagatggcatagtcggcgacagttgcaa
agtttccaaaaaccgtAAGCCTTTTGAGGCAAACTCATTGCTATCAAATC
TGGTCTCTTTTGCCCATAAGGAATGCTAAATGTcatcataataattccat
gtggcTGTTATGTGGTTCCTGCCATCATTTTGATCCATATAAGCTGTAAT
CAGGACATCGTTATGAGCCAAGAATTTCGGGGATCGATCGACCGTTGCTG
GTGGAGCGGAAGAAGTAGTGCAATTCAACATAAATCCaggcttttcaaat
tctttggtgctcctttgaaataaatgaggtgtagaaaacacttttgcatt
gaatttgtccactttccatgctccaacctgaataaaaagtaaaaagtact
gtAAGTTTGGGTCGACACCGATGGTTTGTCGAGAAAAGTGGTCAAAGTGa
caaataaatggaatttttatgctaaaaacaaaacacaaaatataagatat
acttactggatgttttgccattataaaaacaatgtttccatgaagaaaag
tggcctaaaccagtcaaaaaatccaagaactttagcagtaagtttgaaaa
acccatttcttggtcgccatcttgattcagtgtttttctctaccttttct
ccgaaatctgctgcctcaccacgtgatcaaaacattacatcaccatatat
caaaagaaagcttagaacctctactttccgtttctctttacttctacggc
tagcaaagaagccaatgggagaaatatagcttagaagatcACTATGTCaa
aaaaaCGTATATACTCGTCCGCCGGAACGTATGCTCGACGACTATACTCG
TCCGCCGGGCTGAAAAggttaaagtaaatgagataagataagataaaacc
ttaaaatcaaccagaatttacaacctttcgtccaaagcaaaagacgtgct
tttctcgcccccattttgttttcaaatgagaattctagagaattccattc
gtttccagctcccgcggtcttttttcatccaatcagattgcgcgatttca
ctttcgctttctctagtccaatgagactgcgggatttgagtcatgtgaca
tctctattaaaaaacccgcgcgaaatacagggggtcacaaatagaaatac
agggggtcacactactggctacaggaactgaaagcaagcaattaaggcta
atatttttgttttttctgaaggacaaaaggtataggaagctttactgaaa
gagggataaggctgggacaatctatttaaaagatatggacataaaaaagg
cacttttttgggtgataattaaggttttacttagaaactttaattctctt
acccccgtttCGGGCctccctgatatgagcaagggaaccatgatggatcg
catgcgcactgaggtttaaATGATACAATAGAGTTTTgaaaacctaagcc
aatcagctgtgttttaaacattattttatttgaaatctcaattgataaac
atattttgtgaaagttgtctattatgtataaacctattaataagcaattt
cCGGTGGGGTCTTCTAGTGGCCGcccatagcagtgcctatagtccaagag
taaggcctaaaagcctggagctgtctattgtgtagactactgGGAGCCAA
GCTATTTAATTCGAATGGAAATTATTAAGTTATCAAATTTTAGAGTAATG
AAAAattcataatttcttttttagggATACTACAAAGTCCTTGGAAAAGG
GTTATTACCAAAACAACCTGTCATCGTAAAAGCTCGATTCTTCAGTCGAA
AAGCAGAAGATAAAATCAAGAGTGTTGGAGGCACTTGTGTATTAACTGCT
TAA Coding sequence (CDS) from alignment at sc0000336_pilon:130041..133743+ >XLOC_045477 ID=XLOC_045477|Name=XLOC_045477|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=888bp|location=Sequence derived from alignment at sc0000336_pilon:130041..133743+ (Clytia hemisphaerica_ch_hm2_pilon)
ACCACCAGATTGAAGAAGAACCGAAAGAAGAGAGGGCACGTCAGTGCTGG
TCATGGCCGTGTTGACCACCAGATTGAAGAAGAACCGAAAGAAGAGAGGG
CACGTCAGTGCTGGTCATGGCCGTGTTGGCAAACACAGAAAACATCCCGG
TGGTCGAGGAAAAGCTGGTGGCCAACATCACCACAGAACACTTATGGACA
AGTACCATCCTGGTTACTTTGGTAAAGTTGGTATGAGATATTTCCACAAA
ACCCTCAATAAATACCACTGCCCAACTGTCAATTGTGATAAATTATGGAG
CCTTGTCAGTGAACAAACAAGAAAGAACTATGCTGGAAAGAAAGAAGGTC
CAGCACCAGTCATTGATTGTGTTCAGGCaGCAAACACAGAAAACATCCCG
GTGGTCGAGGAAAAGCTGGTGGCCAACATCACCACAGAACACTTATGGAC
AAGTACCATCCTGGTTACTTTGGTAAAGTTGGTATGAGATATTTCCACAA
AACCCTCAATAAATACCACTGCCCAACTGTCAATTGTGATAAATTATGGA
GCCTTGTCAGTGAACAAACAAGAAAGAACTATGCTGGAAAGAAAGAAGGT
CCAGCACCAGTCATTGATTGTGTTCAGGCaggATACTACAAAGTCCTTGG
AAAAGGGTTATTACCAAAACAACCTGTCATCGTAAAAGCTCGATTCTTCA
GTCGAAAAGCAGAAGATAAAATCAAGAGTGTTGGAGGCACTTGTGTATTA
ACTGCTTAAggATACTACAAAGTCCTTGGAAAAGGGTTATTACCAAAACA
ACCTGTCATCGTAAAAGCTCGATTCTTCAGTCGAAAAGCAGAAGATAAAA
TCAAGAGTGTTGGAGGCACTTGTGTATTAACTGCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000336_pilon | genome | sc0000336_pilon:130041..133743 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 319-447:3575 |
| Aaloc | 70-318:227 |
| Aaloc | 4-66:1 |
|
