TCONS_00015325 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015325
Unique NameTCONS_00015325
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1867

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015325 ID=TCONS_00015325|Name=TCONS_00015325|organism=Clytia hemisphaerica|type=transcript|length=1867bp
tgtagttagaaaaataaagaaataacaaaaaacCATCAATATGACGATTA
GCAAGGAATACAGAATTTGTATGCCATTGTCTGTGGAAGAGTATCGCATC
GGTCAACTCTTCATGATCAATAAGCACAGTCATGAACAAAGTCAAAAAGG
AGAAGGCGTGGAAGTGGTGAAGAATGAAGAATGTGAAGATCTAGTTCACG
GGAAAGGAAGATTCACCGAGAAAAGAGTCTACCTCAATAGTAAACTTCCA
ACATGGATTCAAGGGTATGTACCCAAGATCTTTTACGTCACAGAAAAAGC
ATGGAATTATTATCCTTATACAATCACAGAATACAATtgctctgtGTTGC
CACGATTTTCAATTATCGTTAAAACTGGATACAAAAATGATAATGGCTCT
ACTGAAAATcATTTGAATTTAGAGGAAGAAGTGCTAAAGGATCGAGAGGT
TTTACACATGGATATTGCTTATGATGAAATTgctgaaaaatattataaaa
aagaagagGATTGCAGATATTTTCAATCGAAGAAGACGGGAAGAGGTCCA
CTGAAAGAAGGATGGAGGATGGACTCGAACCCCATCATGTGTTCATACAA
GCTGGTCACAGTGGAGTTCAGTGTTTGGGGATTAGCATACCGGGTTGAAA
GTTATGTACATTCCGTGATAAAAGATATTTTATTGGCAGGACATCGGCAA
GCTTTCGCCTGGATAGATGATTGGTATGAGATGACGTTCGAGGATGTGAG
GGCGTTCGAAAAACAATTACAAGAAGAGACCAACAAGAAAGTCATGGGAA
GTAATGAAAACATTGCCGCTGCTCCTACTTCTTGATGTCTATTGTACATC
CCTCGAAACCCCCTTTGTGAGTGGTTGCAGTCGATAGTAAAGATAGCCAG
TCCATCTCCTTCTCTTTCCGGACATCCATGTTATTATAAAGTATAGCATC
CAGACAATAGTTATTCATGGCAGTTGCATGCATTAAAGACTGTCGATGAA
ATAATTGACATTTACTTTAATGTCACCTTTGGAAGGTTGGCTGAAGATTC
AAGAAGTACGACATCCTTAGAATTGAAAGATAATATTTATCACTTGAATA
GAATTTTGCAAATTAAACACATGAATTTAACATGgcacataaaaatttat
ttttattttagaatatGTTATTTAGAGGATTACTGAATGTGTATTGGGTT
GTTCTATTTTGATACCCATACAAGGGGGAGGAACCATTTCAAGctggaaa
atattcttgaaaaaGGAGGGTGGTTATCCCTGGAAAGctgcaaaatttga
acaaatacCCTTGGAAAATCTTTCTTAATACCCTTGAAGTAAGGGGGGGG
CGAACTAAAATCCTTTACCCTCTTAAACCCCCTAGAAATTTTTTTGGATC
CCCTCCCCTGGAAAATGTTCCTCTTCCCTCCTCCTTGTATGAATATAAAA
TTGAATGGCccattgtatatttttgaaacgCATTTAAATGTAGCTAACAT
TGGGGGCGGGAAAATTACCTACTAGATTATATTATTCATACacttttgag
aaatattttctattttcctCGATTTCATTCACCAAGGTTTCCTTATATCT
AATTATGTCCAACAAGAAAACAACAATTAACAATTTGGTCTTTTCAATTG
TTTAGAGgctctttttcagatttttctattttcattgtttttttatttct
attttttagtatttatgTTTTTCTGTTGTTGTATTTTTCATAGATACGTT
TCAGGACCAAATATTTTCTCACGAAAAACTCAAATTAATAATTTCTGACG
AAATGTTCTTCTCTTTGGCGTATTGCTTTGGTAAGAAGGTGTCGTTGTTT
TTTACCTTGGAAAGTAT
Run BLAST on NCBI

protein sequence of TCONS_00015325-protein

>TCONS_00015325-protein ID=TCONS_00015325-protein|Name=TCONS_00015325-protein|organism=Clytia hemisphaerica|type=polypeptide|length=264bp
MTISKEYRICMPLSVEEYRIGQLFMINKHSHEQSQKGEGVEVVKNEECED
LVHGKGRFTEKRVYLNSKLPTWIQGYVPKIFYVTEKAWNYYPYTITEYNC
SVLPRFSIIVKTGYKNDNGSTENHLNLEEEVLKDREVLHMDIAYDEIAEK
YYKKEEDCRYFQSKKTGRGPLKEGWRMDSNPIMCSYKLVTVEFSVWGLAY
RVESYVHSVIKDILLAGHRQAFAWIDDWYEMTFEDVRAFEKQLQEETNKK
VMGSNENIAAAPTS
Run BLAST on NCBI

transcript from alignment at sc0000210:249419..260125+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015325 ID=TCONS_00015325|Name=TCONS_00015325|organism=Clytia hemisphaerica|type=transcript|length=10707bp|location=Sequence derived from alignment at sc0000210:249419..260125+ (Clytia hemisphaerica)
tgtagttagaaaaataaagaaataacaaaaaacCATCAATATGACGATTA
GCAAGGAATACAGAATTTGTATGCCATTGTCTGTGGAAGAGGTAAGGGTG
ATCTTtttatttgttctttattttaacGTTGGTGtatttaacacccctgt
ctcacagccccgttggaacttttttcttcagtggggataaaaatctcttt
tgaaatcCCAACATGGGGATGTGTAATTTTTAGACATAgattttcgagtg
gggatgaaatcaaagtcaatttcctagtgggtctgaaattccagggtatt
ttcccaccaggaccaaatttttgacaaattttccagTGTGGATGGGGTCC
CAGTGGTCCTGTGACATAAGAGTGTTGCTTACAAATAGTTACAAGTGCTA
ATTAAACCAACATGGGACTCAACTATTtactatacacgttttttttagaa
actagttttaccaagcagcctcaatgtttcttaagaaatcggccctttca
gccttaaatgtttcttacatgtttctaaactttttgacataatcagcctt
tgattggaagattcttaaaaaaaaaacgaattaaaaaattttcttttttc
attctcagcctcagtatctttcttagatgtttcttagtttttaggcattc
tgagcctcgtgtttcttaaaagtgtgtttcttaaaaaaaaacttgtatag
taaataaaataaacattAGAATATTGAACAAGGTTTTCAAGAACCATAGA
TTTTAATTCTGATATTATTTTGGAATCCGTCTAAGGagtcaatatttttt
atctcTGAGGGTAATCTATTCCAATCTTGGCCAGCTCAGAAACCAAAAGA
GTTCAGTTTTACTGATTCACCAAAGAAAGTTATTAAACTCATGGCCTTTT
TTCCAACCCCTGACTGTCAACATGACTTTAAAAATGTTGTTAagaccatt
gaaaaagaatcaCCCCTACAAAAACTTTGCATCAGCGTGTTGCCTCCtga
cgatttaaaaaaaatctgaatgGAAAGAAAAGTCTATCGGGAATCAAATG
AGCCAGTACTTTCAGGATGTTAAAAAAATAGTTTCACAGGGGTAAAAGAT
TAGATATTGTCAAGTGCACTCTTGCTggttgtttttatttaattttttta
ttcaaacaattattaaaatagaattttcCGTCGTTATGTATCAAGTACTG
ATGATGGAACAATTTTCTGTTTCAGTATCGCATCGGTCAACTCTTCATGA
TCAATAAGCACAGTCATGAACAAAGTCAAAAAGGAGAAGGCGTGGAAGTG
GTGAAGAATGAAGAATGTGAAGATCTAGTTCACGGGAAAGGAAGATTCAC
CGAGAAAAGAGTCTACCTCAATAGGTAAATTTTTATACATTGTTTCGGCT
TGTAAAAGGAGATTTTAAGAATCCTTAGGCtatgtcatatcttccttcgt
tttgagtgtaaaactcctactcttcgggatatgtgcactgctcttgtttt
gaatattgaatttctccggatacatcgcatgcgcactgaggttttaaagG
AACAATAGAGAgcttcgaaacctaagccaatcttttcttaaagttttcta
ttatgtttaaacctattcaATAAGGGAATTcacggtgggggtcactagtg
gccgccaaTTGCAGTGCCTCTAGACCAAGAgcaaggcctaaaagcctgga
gctgtctattgtgtaaaaaatcatgtGTTGCCaactaaattttaaataaa
acaaaacatttttatcataGAAATACTTTGACTTTAAGCGCTATCTTATA
CAAGGGAACTAATATTTGCGGTAACTTATTTTCGAGGAAGTGATTTTCGC
AAGAACTAATGCTCACGTTTTTGGCCgtcaaccgcgaaaattagttccac
aaacacaggaaaaaatgttaaaaacccaggcctgggaacagggcattttc
ggggtgggttttcatcaaaaaaatttttgccttgggattttcattttgct
ataagttgaataaaaatgtgggtgtctttttagctattttacagacctga
aaaaattttcggaTGAAAAACCCACCTGGGATTTGACcatttcccaggcc
tgggttTTTTAAAATGAGGACTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
GGCATGTTTCATGTTCCAAACCCAAATCCCACCCCCGAAAACAGGCATTT
CCCACCCCGAAAATGCCCTGTTCCCAGGCCtgggtttttaacattttttc
ctgtgaaaaTGCGCCAATTTAGTACACTCGCACTGAAAAATTTAGTTCCA
CAAAATGCGCCAATTTAGCACCCTTGCACCGtaaaaattaattcccttaa
AAGGTATGATCCTATCCTTAGTATCATATCCTTAAATAGGTAACTTAAAC
TCTTTCCAGTGATAAACTCGTGTCCTATCCACATTGGTAGAATCAGCCtt
ctttccttttcttttattttttgactttaaagatTAGGCATATTATTTAT
CAATCTGTTAATAAAAAGGTAGACTGCTGTAtgtaaagttgtttttatta
tttccaGTAAACTTCCAACATGGATTCAAGGGTATGTACCCAAGATCTTT
TACGTCACAGAAAAAGCATGGAATTATTATCCTTATACAATCACAGAATA
CAATGTATGTTTGCTATGCTTTTTtatatttagttttttttctcaaactt
cCATATTTTTTACATTGTCAActtttgattggagtttttatCTTAGAAGT
TGATCTTGGTATGGTGACTAATTTTCGGCTCAGGGCTGGAGTTGCTAAAG
GATTTTCCGGATTTTAGCCAAAATGTTGCTTATTGACTTTAAAATACTTA
ATATGTATTTCTGACTTCAATGACTTCCCTTCTACTTgcctctttttgga
cctacctaaggtagtcctttaaattaacccttgtccgttcgttcgttcgt
ctgttgccagcttttctcgggatcggctcattagttttttctgNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNttcgccggaaaaacggtatttct
tgaatttcttgagctgtactttatattttttcatgaaattttgcacacta
atgcaaaatgtcaatagctaaattgtgacggagcccgattttcgaaaaaa
aaaattttccggccgaaaatgccgacAATAttccggaaaaactggttttt
tggcattttctcgagatttcatcattagttttttctgattttttgctcaa
agatgcgtattaacaatgcccaaaacatggccaagtccgatttttaagaa
aaaaatttttccggcggaaaatgcctgaaatatgccggaaatcgccgttt
ttctagattttcattagacttttccatataattggttgttttttcNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNattttcaataaaattgatttttgaagccggaactatttt
aaaagtcgccggaacaaccttttttcgccggaaagacagtatttcttgaa
tttcttgagctgtacttgaTATATTTTCATGCAAttttcacactgatgca
atatgacaacacctaaaatgtgacggagcccgattttcgaaaaacatttt
tatccggccgaaaatgccggaaatatgccggaaaaccggtttttcgaatt
ttcatttttagttttttctgattttttgcagaaagatgcgtattagcaat
gctcaaaaaatggccgagttcgatttttgagaaaaaaatttttccggttg
ctGGAAagcgccgtttttgcagattttcattggattttttccttgtattt
ctatgtttttcacacaaaaacattacatattgataacaatgctcaccatc
aagcatgattcaattgtcaataaaactgatttttgcgaccagaacttcct
atttattttttccctacaacccttctctNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
ctttcatcatcaggtaggtccattcagcatgttgcttgtttattcTGTTG
TGACTTTATTAGCTATAGAGGGAAGGGCGGTGTgggaattttctttttct
gtcaGTATCTTGATGTTGTGAGTTCGATTTAGAATGCTTTGCTGTGCACA
GACAACAATTCTGACCATTCACGAAAAATTTGTATGTTGCATACTTGGAA
GCTACCATTTTATGATTTACTCGTATTGTTgagtcaatttttatttttta
gtgctctgtGTTGCCACGATTTTCAATTATCGTTAAAACTGGATACAAAA
ATGATAATGGCTCTACTGAAAATGTAAGCACCTTTCTTGTTTGTTTTACC
GCGTCTCACTACACTGGCTCAGAccaattgttttgttttattatattcCC
AGTGCATTATTACAGGCATTTCTTTctcaaaattcaacaaaatatgAATA
ATCTGAATaatctgaaaattgaaaattttctgggATGACTTTGTTTTGAC
AACTGGTTTTATAAATAAGACCATTCTGTTCAAATtaacctacacgtttt
tttataagaacatcaaaatttttgaagcattgGTATGTTCtcagcttttt
gagttttaagcctaaaaattttcttaccatgttcttattttcaccatttt
gtggatatttttgtctgttttcctaagaaatcgggtgttttaaagtcccc
aaagccttaaaatgttgttaccttgttctcaacattttggccatcgaagc
catatgttcttatatagtttgttcttataaaaaacgtgtatttttgtGAG
AGGATAACTTAGTTATGATTTAGTTAGATATGATaatgagaatatttttt
tcttccagcATTTGAATTTAGAGGAAGAAGTGCTAAAGGATCGAGAGGTT
TTACACATGGATATTGCTTATGATGAAATTgctgaaaaatattataaaaa
agaagagGTACAGTGGAATGTATACGATcacaaaatattcaacaaaattc
GAATAAAGATTTGAGTcaaatatcaagaaataaaaaactaacATGTAATT
GCTACATGGTGTTTCATGCTGGTGCAATCTTGAGGGAATATAGCGTATTG
TAtgtaaatcaaatttcaaatgaaATAGAATCTACAACATGCTGCATCGC
CTGAAGATTACACAAGTATGCAACACTGTGTAGCAAAATGTAAGTTAGTT
CTTTTTTCTTGGTGAAAAGCGTAGTTCATAGactttatttgtttttcttt
cctaTAATGTGATTTAACATTTTCACCTCGTATGCCATACTAATAACTTT
GACAAGGTCTAATCTCTTGTTTAAGTTTTTCTGTGAATATATTTGATGTC
AATTATTTGTGGTGGTTTTAACTTATcaaattgctcatattttttCATGA
TGACGATATACTTTGATTTTATTCAGGATTGCAGATATTTTCAATCGAAG
AAGACGGGAAGAGGTCCACTGAAAGAAGGATGGAGGGTAAGAAGGTCTAT
TGGTATGAGTATGTTGAATGCTTTACAGGATTAAATTTTTAAGGAGTGTA
AAAAGGTGGActtctttttgtattttgatttgactgGTCAagtgtttttt
taatcaaaaattggCTACACCAAGGTTCTTTTTGCTCGTTATTTTGTCTT
GAAAATATCTGCTCTGCAAGGTtaggtatgtttttttttgcctttcaatt
tattttcttttgtctttacAGATGGACTCGAACCCCATCATGTGTTCATA
CAAGCTGGTCACAGTGGAGTTCAGTGTTTGGGGATTAGCATACCGGGTTG
AAAGTTATGTACATTCCGTAAGTTCAGTaaatcgatttttaatcgaCTAA
TAACTGGtttatttgcttgtttgttttttgagCCGTTCCAAGAAATTGTC
AACCACGATTTGAGAGCCTATGGCGGATTGAACCGCCTCTATGGGTGCTA
TCAAATGGTCCTAGAACCCTACTGGCGATATCCAGTTAAAAATGAGCGTG
ATGTAACGTACCCCTTTTATCTGGAATTGCCTTATTTTAGCAGGGGGACA
TTTGTTCGTTATTTTTTGAGGTTGTGAGCAAGTAATTGTTTTGACCAAga
caatcgagcgattttacgaAATGCCCTCTACGATTTTTTGACAATCATTG
CGAAGGGAAACTGAGAATTGCACAGATCTGATTGTTAAATGGGGTGTTAG
TTTAGATTCTAAAGAACTGTTTATTTTTGTTCGTCCcgctttgtttgttt
taaaacaCTTTGCTAGGTTCCATGCATCTAGCTTTACAGCTACATTCTTT
ACTAATCGAGACctcataaaaagtttttcagtGGCTCGGTTGAATAGAAA
GGTCTTGTATTTTTCTACCAAATCCAGATAACATTTACATTGTTTATCAG
GTGATAAAAGATATTTTATTGGCAGGACATCGGCAAGCTTTCGCCTGGAT
AGATGATTGGTATGGTAAGAAACCTTCGAAACTTTTTTGACATCCTTTCT
GTATAAGTTgaacctctttaactcgaatactTCCCTAATTCGAACAACTG
TTCTCGTCCCTTCGGTTGACAATGCCTTTTTGACATCCTTTCTGTAAATA
CAGTGGAGGCTTCATAAGTCGAACCTCTGTAACTCGAATGCTTCCCTAAT
TCGAACAacttttctcgtcccttcagttagcattgccttaaaaacttttt
tgacatcCGTTCTTTACTTCTTGGTTTTCACCGTCTCATTTCGTATAGAA
ATAAACCCTTCAtatgaaaaaattgattaaCTTTTCAGTCATTTTCCAAC
CTTTTTAAAGGAACTTTAGTAAAAAAATTCCTTACTTTTTTCACAAAGGT
TTTAGTTTCTTTAGGGATAATTTGAGAGTATAAGATCTCATTTATTTTTA
CTAATCTTTCTCGGTTAGAGATGACGTTCGAGGATGTGAGGGCGTTCGAA
AAACAATTACAAGAAGAGACCAACAAGAAAGTCATGGGAAGTAATGAAAA
CATTGCCGCTGCTCCTACTTCTTGATGTCTATTGTACATCCCTCGAAACC
CCCTTTGTGAGTGGTTGCAGTCGATAGTAAAGATAGCCAGTCCATCTCCT
TCTCTTTCCGGACATCCATGTTATTATAAAGTATAGCATCCAGACAATAG
TTATTCATGGCAGTTGCATGCATTAAAGACTGTCGATGAAATAATTGACA
TTTACTTTAATGTCACCTTTGGAAGGTTGGCTGAAGATTCAAGAAGTACG
ACATCCTTAGAATTGAAAGATAATATTTATCACTTGAATAGAATTTTGCA
AATTAAACACATGAATTTAACATGgcacataaaaatttatttttatttta
gaatatGTTATTTAGAGGATTACTGAATGTGTATTGGGTTGTTCTATTTT
GATACCCATACAAGGGGGAGGAACCATTTCAAGctggaaaatattcttga
aaaaGGAGGGTGGTTATCCCTGGAAAGctgcaaaatttgaacaaatacCC
TTGGAAAATCTTTCTTAATACCCTTGAAGTAAGGGGGGGGCGAACTAAAA
TCCTTTACCCTCTTAAACCCCCTAGAAATTTTTTTGGATCCCCTCCCCTG
GAAAATGTTCCTCTTCCCTCCTCCTTGTATGAATATAAAATTGAATGGCc
cattgtatatttttgaaacgCATTTAAATGTAGCTAACATTGGGGGCGGG
AAAATTACCTACTAGATTATATTATTCATACacttttgagaaatattttc
tattttcctCGATTTCATTCACCAAGGTTTCCTTATATCTAATTATGTCC
AACAAGAAAACAACAATTAACAATTTGGTCTTTTCAATTGTTTAGAGgct
ctttttcagatttttctattttcattgtttttttatttctattttttagt
atttatgTTTTTCTGTTGTTGTATTTTTCATAGATACGTTTCAGGACCAA
ATATTTTCTCACGAAAAACTCAAATTAATAATTTCTGACGAAATGTTCTT
CTCTTTGGCGTATTGCTTTGGTAAGAAGGTGTCGTTGTTTTTTACCTTGG
AAAGTAT

Coding sequence (CDS) from alignment at sc0000210:249419..260125+

>TCONS_00015325 ID=TCONS_00015325|Name=TCONS_00015325|organism=Clytia hemisphaerica|type=CDS|length=7155bp|location=Sequence derived from alignment at sc0000210:249419..260125+ (Clytia hemisphaerica)
ATGACGATTAGCAAGGAATACAGAATTTGTATGCCATTGTCTGTGGAAGA
GTATCGCATCGGTCAACTCTTCATGATCAATAAGCACAGTCATGAACAAA
GTCAAAAAGGAGAAGGCGTGGAAGTGGTGAAGAATGAAGAATGTGAAGAT
CTAGTTCACGGGAAAGGAAGATTCACCGAGAAAAGAGTCTACCTCAATAG
TAAACTTCCAACATGGATTCAAGGGTATGTACCCAAGATCTTTTACGTCA
CAGAAAAAGCATGGAATTATTATCCTTATACAATCACAGAATACAATtgc
tctgtGTTGCCACGATTTTCAATTATCGTTAAAACTGGATACAAAAATGA
TAATGGCTCTACTGAAAATcATTTGAATTTAGAGGAAGAAGTGCTAAAGG
ATCGAGAGGTTTTACACATGGATATTGCTTATGATGAAATTgctgaaaaa
tattataaaaaagaagagGATTGCAGATATTTTCAATCGAAGAAGACGGG
AAGAGGTCCACTGAAAGAAGGATGGAGGATGGACTCGAACCCCATCATGT
GTTCATACAAGCTGGTCACAGTGGAGTTCAGTGTTTGGGGATTAGCATAC
CGGGTTGAAAGTTATGTACATTCCGTGATAAAAGATATTTTATTGGCAGG
ACATCGGCAAGCTTTCGCCTGGATAGATGATTGGTATGAGATGACGTTCG
AGGATGTGAGGGCGTTCGAAAAACAATTACAAGAAGAGACCAACAAGAAA
GTCATGGGAAGTAATGAAAACATTGCCGCTGCTCCTACTTCTTGAATGAC
GATTAGCAAGGAATACAGAATTTGTATGCCATTGTCTGTGGAAGAGTATC
GCATCGGTCAACTCTTCATGATCAATAAGCACAGTCATGAACAAAGTCAA
AAAGGAGAAGGCGTGGAAGTGGTGAAGAATGAAGAATGTGAAGATCTAGT
TCACGGGAAAGGAAGATTCACCGAGAAAAGAGTCTACCTCAATAGTAAAC
TTCCAACATGGATTCAAGGGTATGTACCCAAGATCTTTTACGTCACAGAA
AAAGCATGGAATTATTATCCTTATACAATCACAGAATACAATtgctctgt
GTTGCCACGATTTTCAATTATCGTTAAAACTGGATACAAAAATGATAATG
GCTCTACTGAAAATcATTTGAATTTAGAGGAAGAAGTGCTAAAGGATCGA
GAGGTTTTACACATGGATATTGCTTATGATGAAATTgctgaaaaatatta
taaaaaagaagagGATTGCAGATATTTTCAATCGAAGAAGACGGGAAGAG
GTCCACTGAAAGAAGGATGGAGGATGGACTCGAACCCCATCATGTGTTCA
TACAAGCTGGTCACAGTGGAGTTCAGTGTTTGGGGATTAGCATACCGGGT
TGAAAGTTATGTACATTCCGTGATAAAAGATATTTTATTGGCAGGACATC
GGCAAGCTTTCGCCTGGATAGATGATTGGTATGAGATGACGTTCGAGGAT
GTGAGGGCGTTCGAAAAACAATTACAAGAAGAGACCAACAAGAAAGTCAT
GGGAAGTAATGAAAACATTGCCGCTGCTCCTACTTCTTGAATGACGATTA
GCAAGGAATACAGAATTTGTATGCCATTGTCTGTGGAAGAGTATCGCATC
GGTCAACTCTTCATGATCAATAAGCACAGTCATGAACAAAGTCAAAAAGG
AGAAGGCGTGGAAGTGGTGAAGAATGAAGAATGTGAAGATCTAGTTCACG
GGAAAGGAAGATTCACCGAGAAAAGAGTCTACCTCAATAGTAAACTTCCA
ACATGGATTCAAGGGTATGTACCCAAGATCTTTTACGTCACAGAAAAAGC
ATGGAATTATTATCCTTATACAATCACAGAATACAATtgctctgtGTTGC
CACGATTTTCAATTATCGTTAAAACTGGATACAAAAATGATAATGGCTCT
ACTGAAAATcATTTGAATTTAGAGGAAGAAGTGCTAAAGGATCGAGAGGT
TTTACACATGGATATTGCTTATGATGAAATTgctgaaaaatattataaaa
aagaagagGATTGCAGATATTTTCAATCGAAGAAGACGGGAAGAGGTCCA
CTGAAAGAAGGATGGAGGATGGACTCGAACCCCATCATGTGTTCATACAA
GCTGGTCACAGTGGAGTTCAGTGTTTGGGGATTAGCATACCGGGTTGAAA
GTTATGTACATTCCGTGATAAAAGATATTTTATTGGCAGGACATCGGCAA
GCTTTCGCCTGGATAGATGATTGGTATGAGATGACGTTCGAGGATGTGAG
GGCGTTCGAAAAACAATTACAAGAAGAGACCAACAAGAAAGTCATGGGAA
GTAATGAAAACATTGCCGCTGCTCCTACTTCTTGAATGACGATTAGCAAG
GAATACAGAATTTGTATGCCATTGTCTGTGGAAGAGTATCGCATCGGTCA
ACTCTTCATGATCAATAAGCACAGTCATGAACAAAGTCAAAAAGGAGAAG
GCGTGGAAGTGGTGAAGAATGAAGAATGTGAAGATCTAGTTCACGGGAAA
GGAAGATTCACCGAGAAAAGAGTCTACCTCAATAGTAAACTTCCAACATG
GATTCAAGGGTATGTACCCAAGATCTTTTACGTCACAGAAAAAGCATGGA
ATTATTATCCTTATACAATCACAGAATACAATtgctctgtGTTGCCACGA
TTTTCAATTATCGTTAAAACTGGATACAAAAATGATAATGGCTCTACTGA
AAATcATTTGAATTTAGAGGAAGAAGTGCTAAAGGATCGAGAGGTTTTAC
ACATGGATATTGCTTATGATGAAATTgctgaaaaatattataaaaaagaa
gagGATTGCAGATATTTTCAATCGAAGAAGACGGGAAGAGGTCCACTGAA
AGAAGGATGGAGGATGGACTCGAACCCCATCATGTGTTCATACAAGCTGG
TCACAGTGGAGTTCAGTGTTTGGGGATTAGCATACCGGGTTGAAAGTTAT
GTACATTCCGTGATAAAAGATATTTTATTGGCAGGACATCGGCAAGCTTT
CGCCTGGATAGATGATTGGTATGAGATGACGTTCGAGGATGTGAGGGCGT
TCGAAAAACAATTACAAGAAGAGACCAACAAGAAAGTCATGGGAAGTAAT
GAAAACATTGCCGCTGCTCCTACTTCTTGAATGACGATTAGCAAGGAATA
CAGAATTTGTATGCCATTGTCTGTGGAAGAGTATCGCATCGGTCAACTCT
TCATGATCAATAAGCACAGTCATGAACAAAGTCAAAAAGGAGAAGGCGTG
GAAGTGGTGAAGAATGAAGAATGTGAAGATCTAGTTCACGGGAAAGGAAG
ATTCACCGAGAAAAGAGTCTACCTCAATAGTAAACTTCCAACATGGATTC
AAGGGTATGTACCCAAGATCTTTTACGTCACAGAAAAAGCATGGAATTAT
TATCCTTATACAATCACAGAATACAATtgctctgtGTTGCCACGATTTTC
AATTATCGTTAAAACTGGATACAAAAATGATAATGGCTCTACTGAAAATc
ATTTGAATTTAGAGGAAGAAGTGCTAAAGGATCGAGAGGTTTTACACATG
GATATTGCTTATGATGAAATTgctgaaaaatattataaaaaagaagagGA
TTGCAGATATTTTCAATCGAAGAAGACGGGAAGAGGTCCACTGAAAGAAG
GATGGAGGATGGACTCGAACCCCATCATGTGTTCATACAAGCTGGTCACA
GTGGAGTTCAGTGTTTGGGGATTAGCATACCGGGTTGAAAGTTATGTACA
TTCCGTGATAAAAGATATTTTATTGGCAGGACATCGGCAAGCTTTCGCCT
GGATAGATGATTGGTATGAGATGACGTTCGAGGATGTGAGGGCGTTCGAA
AAACAATTACAAGAAGAGACCAACAAGAAAGTCATGGGAAGTAATGAAAA
CATTGCCGCTGCTCCTACTTCTTGAATGACGATTAGCAAGGAATACAGAA
TTTGTATGCCATTGTCTGTGGAAGAGTATCGCATCGGTCAACTCTTCATG
ATCAATAAGCACAGTCATGAACAAAGTCAAAAAGGAGAAGGCGTGGAAGT
GGTGAAGAATGAAGAATGTGAAGATCTAGTTCACGGGAAAGGAAGATTCA
CCGAGAAAAGAGTCTACCTCAATAGTAAACTTCCAACATGGATTCAAGGG
TATGTACCCAAGATCTTTTACGTCACAGAAAAAGCATGGAATTATTATCC
TTATACAATCACAGAATACAATtgctctgtGTTGCCACGATTTTCAATTA
TCGTTAAAACTGGATACAAAAATGATAATGGCTCTACTGAAAATcATTTG
AATTTAGAGGAAGAAGTGCTAAAGGATCGAGAGGTTTTACACATGGATAT
TGCTTATGATGAAATTgctgaaaaatattataaaaaagaagagGATTGCA
GATATTTTCAATCGAAGAAGACGGGAAGAGGTCCACTGAAAGAAGGATGG
AGGATGGACTCGAACCCCATCATGTGTTCATACAAGCTGGTCACAGTGGA
GTTCAGTGTTTGGGGATTAGCATACCGGGTTGAAAGTTATGTACATTCCG
TGATAAAAGATATTTTATTGGCAGGACATCGGCAAGCTTTCGCCTGGATA
GATGATTGGTATGAGATGACGTTCGAGGATGTGAGGGCGTTCGAAAAACA
ATTACAAGAAGAGACCAACAAGAAAGTCATGGGAAGTAATGAAAACATTG
CCGCTGCTCCTACTTCTTGAATGACGATTAGCAAGGAATACAGAATTTGT
ATGCCATTGTCTGTGGAAGAGTATCGCATCGGTCAACTCTTCATGATCAA
TAAGCACAGTCATGAACAAAGTCAAAAAGGAGAAGGCGTGGAAGTGGTGA
AGAATGAAGAATGTGAAGATCTAGTTCACGGGAAAGGAAGATTCACCGAG
AAAAGAGTCTACCTCAATAGTAAACTTCCAACATGGATTCAAGGGTATGT
ACCCAAGATCTTTTACGTCACAGAAAAAGCATGGAATTATTATCCTTATA
CAATCACAGAATACAATtgctctgtGTTGCCACGATTTTCAATTATCGTT
AAAACTGGATACAAAAATGATAATGGCTCTACTGAAAATcATTTGAATTT
AGAGGAAGAAGTGCTAAAGGATCGAGAGGTTTTACACATGGATATTGCTT
ATGATGAAATTgctgaaaaatattataaaaaagaagagGATTGCAGATAT
TTTCAATCGAAGAAGACGGGAAGAGGTCCACTGAAAGAAGGATGGAGGAT
GGACTCGAACCCCATCATGTGTTCATACAAGCTGGTCACAGTGGAGTTCA
GTGTTTGGGGATTAGCATACCGGGTTGAAAGTTATGTACATTCCGTGATA
AAAGATATTTTATTGGCAGGACATCGGCAAGCTTTCGCCTGGATAGATGA
TTGGTATGAGATGACGTTCGAGGATGTGAGGGCGTTCGAAAAACAATTAC
AAGAAGAGACCAACAAGAAAGTCATGGGAAGTAATGAAAACATTGCCGCT
GCTCCTACTTCTTGAATGACGATTAGCAAGGAATACAGAATTTGTATGCC
ATTGTCTGTGGAAGAGTATCGCATCGGTCAACTCTTCATGATCAATAAGC
ACAGTCATGAACAAAGTCAAAAAGGAGAAGGCGTGGAAGTGGTGAAGAAT
GAAGAATGTGAAGATCTAGTTCACGGGAAAGGAAGATTCACCGAGAAAAG
AGTCTACCTCAATAGTAAACTTCCAACATGGATTCAAGGGTATGTACCCA
AGATCTTTTACGTCACAGAAAAAGCATGGAATTATTATCCTTATACAATC
ACAGAATACAATtgctctgtGTTGCCACGATTTTCAATTATCGTTAAAAC
TGGATACAAAAATGATAATGGCTCTACTGAAAATcATTTGAATTTAGAGG
AAGAAGTGCTAAAGGATCGAGAGGTTTTACACATGGATATTGCTTATGAT
GAAATTgctgaaaaatattataaaaaagaagagGATTGCAGATATTTTCA
ATCGAAGAAGACGGGAAGAGGTCCACTGAAAGAAGGATGGAGGATGGACT
CGAACCCCATCATGTGTTCATACAAGCTGGTCACAGTGGAGTTCAGTGTT
TGGGGATTAGCATACCGGGTTGAAAGTTATGTACATTCCGTGATAAAAGA
TATTTTATTGGCAGGACATCGGCAAGCTTTCGCCTGGATAGATGATTGGT
ATGAGATGACGTTCGAGGATGTGAGGGCGTTCGAAAAACAATTACAAGAA
GAGACCAACAAGAAAGTCATGGGAAGTAATGAAAACATTGCCGCTGCTCC
TACTTCTTGAATGACGATTAGCAAGGAATACAGAATTTGTATGCCATTGT
CTGTGGAAGAGTATCGCATCGGTCAACTCTTCATGATCAATAAGCACAGT
CATGAACAAAGTCAAAAAGGAGAAGGCGTGGAAGTGGTGAAGAATGAAGA
ATGTGAAGATCTAGTTCACGGGAAAGGAAGATTCACCGAGAAAAGAGTCT
ACCTCAATAGTAAACTTCCAACATGGATTCAAGGGTATGTACCCAAGATC
TTTTACGTCACAGAAAAAGCATGGAATTATTATCCTTATACAATCACAGA
ATACAATtgctctgtGTTGCCACGATTTTCAATTATCGTTAAAACTGGAT
ACAAAAATGATAATGGCTCTACTGAAAATcATTTGAATTTAGAGGAAGAA
GTGCTAAAGGATCGAGAGGTTTTACACATGGATATTGCTTATGATGAAAT
TgctgaaaaatattataaaaaagaagagGATTGCAGATATTTTCAATCGA
AGAAGACGGGAAGAGGTCCACTGAAAGAAGGATGGAGGATGGACTCGAAC
CCCATCATGTGTTCATACAAGCTGGTCACAGTGGAGTTCAGTGTTTGGGG
ATTAGCATACCGGGTTGAAAGTTATGTACATTCCGTGATAAAAGATATTT
TATTGGCAGGACATCGGCAAGCTTTCGCCTGGATAGATGATTGGTATGAG
ATGACGTTCGAGGATGTGAGGGCGTTCGAAAAACAATTACAAGAAGAGAC
CAACAAGAAAGTCATGGGAAGTAATGAAAACATTGCCGCTGCTCCTACTT
CTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008574XLOC_008574Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015325-exon-sc0000210-1491911889:249419..249509TCONS_00015325-exon-sc0000210-1491911889:249419..249509Clytia hemisphaericaexon
TCONS_00015325-exon-sc0000210-1510915933:249419..249509TCONS_00015325-exon-sc0000210-1510915933:249419..249509Clytia hemisphaericaexon
TCONS_00015325-exon-sc0000210-1575043694:249419..249509TCONS_00015325-exon-sc0000210-1575043694:249419..249509Clytia hemisphaericaexon
TCONS_00015325-exon-sc0000210-1491911889:250644..250792TCONS_00015325-exon-sc0000210-1491911889:250644..250792Clytia hemisphaericaexon
TCONS_00015325-exon-sc0000210-1510915933:250644..250792TCONS_00015325-exon-sc0000210-1510915933:250644..250792Clytia hemisphaericaexon
TCONS_00015325-exon-sc0000210-1575043694:250644..250792TCONS_00015325-exon-sc0000210-1575043694:250644..250792Clytia hemisphaericaexon
TCONS_00015325-exon-sc0000210-1491911889:253576..253672TCONS_00015325-exon-sc0000210-1491911889:253576..253672Clytia hemisphaericaexon
TCONS_00015325-exon-sc0000210-1510915933:253576..253672TCONS_00015325-exon-sc0000210-1510915933:253576..253672Clytia hemisphaericaexon
TCONS_00015325-exon-sc0000210-1575043694:253576..253672TCONS_00015325-exon-sc0000210-1575043694:253576..253672Clytia hemisphaericaexon
TCONS_00015325-exon-sc0000210-1491911889:256320..256391TCONS_00015325-exon-sc0000210-1491911889:256320..256391Clytia hemisphaericaexon
TCONS_00015325-exon-sc0000210-1510915933:256320..256391TCONS_00015325-exon-sc0000210-1510915933:256320..256391Clytia hemisphaericaexon
TCONS_00015325-exon-sc0000210-1575043694:256320..256391TCONS_00015325-exon-sc0000210-1575043694:256320..256391Clytia hemisphaericaexon
TCONS_00015325-exon-sc0000210-1491911889:256927..257025TCONS_00015325-exon-sc0000210-1491911889:256927..257025Clytia hemisphaericaexon
TCONS_00015325-exon-sc0000210-1510915933:256927..257025TCONS_00015325-exon-sc0000210-1510915933:256927..257025Clytia hemisphaericaexon
TCONS_00015325-exon-sc0000210-1575043694:256927..257025TCONS_00015325-exon-sc0000210-1575043694:256927..257025Clytia hemisphaericaexon
TCONS_00015325-exon-sc0000210-1491911889:257495..257554TCONS_00015325-exon-sc0000210-1491911889:257495..257554Clytia hemisphaericaexon
TCONS_00015325-exon-sc0000210-1510915933:257495..257554TCONS_00015325-exon-sc0000210-1510915933:257495..257554Clytia hemisphaericaexon
TCONS_00015325-exon-sc0000210-1575043694:257495..257554TCONS_00015325-exon-sc0000210-1575043694:257495..257554Clytia hemisphaericaexon
TCONS_00015325-exon-sc0000210-1491911889:257790..257885TCONS_00015325-exon-sc0000210-1491911889:257790..257885Clytia hemisphaericaexon
TCONS_00015325-exon-sc0000210-1510915933:257790..257885TCONS_00015325-exon-sc0000210-1510915933:257790..257885Clytia hemisphaericaexon
TCONS_00015325-exon-sc0000210-1575043694:257790..257885TCONS_00015325-exon-sc0000210-1575043694:257790..257885Clytia hemisphaericaexon
TCONS_00015325-exon-sc0000210-1491911889:258469..258532TCONS_00015325-exon-sc0000210-1491911889:258469..258532Clytia hemisphaericaexon
TCONS_00015325-exon-sc0000210-1510915933:258469..258532TCONS_00015325-exon-sc0000210-1510915933:258469..258532Clytia hemisphaericaexon
TCONS_00015325-exon-sc0000210-1575043694:258469..258532TCONS_00015325-exon-sc0000210-1575043694:258469..258532Clytia hemisphaericaexon
TCONS_00015325-exon-sc0000210-1491911889:258987..260125TCONS_00015325-exon-sc0000210-1491911889:258987..260125Clytia hemisphaericaexon
TCONS_00015325-exon-sc0000210-1510915933:258987..260125TCONS_00015325-exon-sc0000210-1510915933:258987..260125Clytia hemisphaericaexon
TCONS_00015325-exon-sc0000210-1575043694:258987..260125TCONS_00015325-exon-sc0000210-1575043694:258987..260125Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015325-proteinTCONS_00015325-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000210supercontigsc0000210:249419..260125 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
74.1652	70.6534	47.535	36.0051	59.1265	43.895	42.8887	45.818	27.4802	30.532	22.416	17.6284	17.8742	15.7989	17.0957	17.7074	25.4283	22.441	9.07584	13.7341	19.0336	16.9533	53.068	39.9935	15.0939	19.6631	22.0936	16.9405	38.4513	36.4414
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001666PI_transfer
IPR023393START-like_dom
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
cellular_component GO:0005622 intracellular
Blast
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BLAST of TCONS_00015325 vs. Swiss-Prot (Human)
Match: PITC1 (Cytoplasmic phosphatidylinositol transfer protein 1 OS=Homo sapiens GN=PITPNC1 PE=1 SV=3)

HSP 1 Score: 327.791 bits (839), Expect = 3.936e-106
Identity = 175/328 (53.35%), Postives = 228/328 (69.51%), Query Frame = 2 
Query:   53 KEYRICMPLSVEEYRIGQLFMINKHSHEQSQXXXXXXXXXXXXXXDLVHGKGRFTEKRVYLNSKLPTWIQGYVPKIFYVTEKAWNYYPYTITEYNCSVLPRFSIIVKTGYKNDNGSTENHLNLEEEVLKDREVLHMDIAYDEIAEKYYKKEEDCRYFQSKKTGRGPLKEGWRMDSNPIMCSYKLVTVEFSVWGLAYRVESYVHSVIKDILLAGHRQAFAWIDDWYEMTFEDVRAFEKQLQEETNKKV--------MGS----NENIAAAPTS*CLLYIPRNPLCEWLQSIVKIASPSPSLSGHPCYYKV*HPDNSYSWQLHALKTVDE 1000
            KEYRICMPL+V+EY+IGQL+MI+KHSHEQS +GEGVEVV+NE  ED  HG G+FTEKRVYLNSKLP+W +  VPKIFYVTEKAWNYYPYTITEY CS LP+FSI ++T Y+++ GS +   + E + + +REV  +DIA DEI E+YYK+ ED ++F+S+KTGRG L+EGWR    PIMCSYKLVTV+F VWGL  RVE +VH V++DILL GHRQAFAW+D+WY+MT ++VR FE+  QE TNKK+        + S      ++ +AP+S      P  PL       + +    P     P    +  P+   +  L  + + D+
Sbjct:    4 KEYRICMPLTVDEYKIGQLYMISKHSHEQSDRGEGVEVVQNEPFEDPHHGNGQFTEKRVYLNSKLPSWARAVVPKIFYVTEKAWNYYPYTITEYTCSFLPKFSIHIETKYEDNKGSNDTIFDNEAKDV-EREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPIMCSYKLVTVKFEVWGLQTRVEQFVHKVVRDILLIGHRQAFAWVDEWYDMTMDEVREFERATQEATNKKIGIFPPAISISSIPLLPSSVRSAPSS-----APSTPLSTDAPEFLSVPKDRPRKKSAPETLTLPDPEKKATLNLPGMHSSDK 325
The following BLAST results are available for this feature:
BLAST of TCONS_00015325 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PITC13.936e-10653.35Cytoplasmic phosphatidylinositol transfer protein ... [more]
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