XLOC_008574 (gene) - C. hemisphaerica

Overview
NameXLOC_008574
Unique NameXLOC_008574
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000210:249419..260125+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008574 ID=XLOC_008574|Name=XLOC_008574|organism=Clytia hemisphaerica|type=gene|length=10707bp|location=Sequence derived from alignment at sc0000210:249419..260125+ (Clytia hemisphaerica)
tgtagttagaaaaataaagaaataacaaaaaacCATCAATATGACGATTA GCAAGGAATACAGAATTTGTATGCCATTGTCTGTGGAAGAGGTAAGGGTG ATCTTtttatttgttctttattttaacGTTGGTGtatttaacacccctgt ctcacagccccgttggaacttttttcttcagtggggataaaaatctcttt tgaaatcCCAACATGGGGATGTGTAATTTTTAGACATAgattttcgagtg gggatgaaatcaaagtcaatttcctagtgggtctgaaattccagggtatt ttcccaccaggaccaaatttttgacaaattttccagTGTGGATGGGGTCC CAGTGGTCCTGTGACATAAGAGTGTTGCTTACAAATAGTTACAAGTGCTA ATTAAACCAACATGGGACTCAACTATTtactatacacgttttttttagaa actagttttaccaagcagcctcaatgtttcttaagaaatcggccctttca gccttaaatgtttcttacatgtttctaaactttttgacataatcagcctt tgattggaagattcttaaaaaaaaaacgaattaaaaaattttcttttttc attctcagcctcagtatctttcttagatgtttcttagtttttaggcattc tgagcctcgtgtttcttaaaagtgtgtttcttaaaaaaaaacttgtatag taaataaaataaacattAGAATATTGAACAAGGTTTTCAAGAACCATAGA TTTTAATTCTGATATTATTTTGGAATCCGTCTAAGGagtcaatatttttt atctcTGAGGGTAATCTATTCCAATCTTGGCCAGCTCAGAAACCAAAAGA GTTCAGTTTTACTGATTCACCAAAGAAAGTTATTAAACTCATGGCCTTTT TTCCAACCCCTGACTGTCAACATGACTTTAAAAATGTTGTTAagaccatt gaaaaagaatcaCCCCTACAAAAACTTTGCATCAGCGTGTTGCCTCCtga cgatttaaaaaaaatctgaatgGAAAGAAAAGTCTATCGGGAATCAAATG AGCCAGTACTTTCAGGATGTTAAAAAAATAGTTTCACAGGGGTAAAAGAT TAGATATTGTCAAGTGCACTCTTGCTggttgtttttatttaattttttta ttcaaacaattattaaaatagaattttcCGTCGTTATGTATCAAGTACTG ATGATGGAACAATTTTCTGTTTCAGTATCGCATCGGTCAACTCTTCATGA TCAATAAGCACAGTCATGAACAAAGTCAAAAAGGAGAAGGCGTGGAAGTG GTGAAGAATGAAGAATGTGAAGATCTAGTTCACGGGAAAGGAAGATTCAC CGAGAAAAGAGTCTACCTCAATAGGTAAATTTTTATACATTGTTTCGGCT TGTAAAAGGAGATTTTAAGAATCCTTAGGCtatgtcatatcttccttcgt tttgagtgtaaaactcctactcttcgggatatgtgcactgctcttgtttt gaatattgaatttctccggatacatcgcatgcgcactgaggttttaaagG AACAATAGAGAgcttcgaaacctaagccaatcttttcttaaagttttcta ttatgtttaaacctattcaATAAGGGAATTcacggtgggggtcactagtg gccgccaaTTGCAGTGCCTCTAGACCAAGAgcaaggcctaaaagcctgga gctgtctattgtgtaaaaaatcatgtGTTGCCaactaaattttaaataaa acaaaacatttttatcataGAAATACTTTGACTTTAAGCGCTATCTTATA CAAGGGAACTAATATTTGCGGTAACTTATTTTCGAGGAAGTGATTTTCGC AAGAACTAATGCTCACGTTTTTGGCCgtcaaccgcgaaaattagttccac aaacacaggaaaaaatgttaaaaacccaggcctgggaacagggcattttc ggggtgggttttcatcaaaaaaatttttgccttgggattttcattttgct ataagttgaataaaaatgtgggtgtctttttagctattttacagacctga aaaaattttcggaTGAAAAACCCACCTGGGATTTGACcatttcccaggcc tgggttTTTTAAAATGAGGACTNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT GGCATGTTTCATGTTCCAAACCCAAATCCCACCCCCGAAAACAGGCATTT CCCACCCCGAAAATGCCCTGTTCCCAGGCCtgggtttttaacattttttc ctgtgaaaaTGCGCCAATTTAGTACACTCGCACTGAAAAATTTAGTTCCA CAAAATGCGCCAATTTAGCACCCTTGCACCGtaaaaattaattcccttaa AAGGTATGATCCTATCCTTAGTATCATATCCTTAAATAGGTAACTTAAAC TCTTTCCAGTGATAAACTCGTGTCCTATCCACATTGGTAGAATCAGCCtt ctttccttttcttttattttttgactttaaagatTAGGCATATTATTTAT CAATCTGTTAATAAAAAGGTAGACTGCTGTAtgtaaagttgtttttatta tttccaGTAAACTTCCAACATGGATTCAAGGGTATGTACCCAAGATCTTT TACGTCACAGAAAAAGCATGGAATTATTATCCTTATACAATCACAGAATA CAATGTATGTTTGCTATGCTTTTTtatatttagttttttttctcaaactt cCATATTTTTTACATTGTCAActtttgattggagtttttatCTTAGAAGT TGATCTTGGTATGGTGACTAATTTTCGGCTCAGGGCTGGAGTTGCTAAAG GATTTTCCGGATTTTAGCCAAAATGTTGCTTATTGACTTTAAAATACTTA ATATGTATTTCTGACTTCAATGACTTCCCTTCTACTTgcctctttttgga cctacctaaggtagtcctttaaattaacccttgtccgttcgttcgttcgt ctgttgccagcttttctcgggatcggctcattagttttttctgNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNttcgccggaaaaacggtatttct tgaatttcttgagctgtactttatattttttcatgaaattttgcacacta atgcaaaatgtcaatagctaaattgtgacggagcccgattttcgaaaaaa aaaattttccggccgaaaatgccgacAATAttccggaaaaactggttttt tggcattttctcgagatttcatcattagttttttctgattttttgctcaa agatgcgtattaacaatgcccaaaacatggccaagtccgatttttaagaa aaaaatttttccggcggaaaatgcctgaaatatgccggaaatcgccgttt ttctagattttcattagacttttccatataattggttgttttttcNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNattttcaataaaattgatttttgaagccggaactatttt aaaagtcgccggaacaaccttttttcgccggaaagacagtatttcttgaa tttcttgagctgtacttgaTATATTTTCATGCAAttttcacactgatgca atatgacaacacctaaaatgtgacggagcccgattttcgaaaaacatttt tatccggccgaaaatgccggaaatatgccggaaaaccggtttttcgaatt ttcatttttagttttttctgattttttgcagaaagatgcgtattagcaat gctcaaaaaatggccgagttcgatttttgagaaaaaaatttttccggttg ctGGAAagcgccgtttttgcagattttcattggattttttccttgtattt ctatgtttttcacacaaaaacattacatattgataacaatgctcaccatc aagcatgattcaattgtcaataaaactgatttttgcgaccagaacttcct atttattttttccctacaacccttctctNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ctttcatcatcaggtaggtccattcagcatgttgcttgtttattcTGTTG TGACTTTATTAGCTATAGAGGGAAGGGCGGTGTgggaattttctttttct gtcaGTATCTTGATGTTGTGAGTTCGATTTAGAATGCTTTGCTGTGCACA GACAACAATTCTGACCATTCACGAAAAATTTGTATGTTGCATACTTGGAA GCTACCATTTTATGATTTACTCGTATTGTTgagtcaatttttatttttta gtgctctgtGTTGCCACGATTTTCAATTATCGTTAAAACTGGATACAAAA ATGATAATGGCTCTACTGAAAATGTAAGCACCTTTCTTGTTTGTTTTACC GCGTCTCACTACACTGGCTCAGAccaattgttttgttttattatattcCC AGTGCATTATTACAGGCATTTCTTTctcaaaattcaacaaaatatgAATA ATCTGAATaatctgaaaattgaaaattttctgggATGACTTTGTTTTGAC AACTGGTTTTATAAATAAGACCATTCTGTTCAAATtaacctacacgtttt tttataagaacatcaaaatttttgaagcattgGTATGTTCtcagcttttt gagttttaagcctaaaaattttcttaccatgttcttattttcaccatttt gtggatatttttgtctgttttcctaagaaatcgggtgttttaaagtcccc aaagccttaaaatgttgttaccttgttctcaacattttggccatcgaagc catatgttcttatatagtttgttcttataaaaaacgtgtatttttgtGAG AGGATAACTTAGTTATGATTTAGTTAGATATGATaatgagaatatttttt tcttccagcATTTGAATTTAGAGGAAGAAGTGCTAAAGGATCGAGAGGTT TTACACATGGATATTGCTTATGATGAAATTgctgaaaaatattataaaaa agaagagGTACAGTGGAATGTATACGATcacaaaatattcaacaaaattc GAATAAAGATTTGAGTcaaatatcaagaaataaaaaactaacATGTAATT GCTACATGGTGTTTCATGCTGGTGCAATCTTGAGGGAATATAGCGTATTG TAtgtaaatcaaatttcaaatgaaATAGAATCTACAACATGCTGCATCGC CTGAAGATTACACAAGTATGCAACACTGTGTAGCAAAATGTAAGTTAGTT CTTTTTTCTTGGTGAAAAGCGTAGTTCATAGactttatttgtttttcttt cctaTAATGTGATTTAACATTTTCACCTCGTATGCCATACTAATAACTTT GACAAGGTCTAATCTCTTGTTTAAGTTTTTCTGTGAATATATTTGATGTC AATTATTTGTGGTGGTTTTAACTTATcaaattgctcatattttttCATGA TGACGATATACTTTGATTTTATTCAGGATTGCAGATATTTTCAATCGAAG AAGACGGGAAGAGGTCCACTGAAAGAAGGATGGAGGGTAAGAAGGTCTAT TGGTATGAGTATGTTGAATGCTTTACAGGATTAAATTTTTAAGGAGTGTA AAAAGGTGGActtctttttgtattttgatttgactgGTCAagtgtttttt taatcaaaaattggCTACACCAAGGTTCTTTTTGCTCGTTATTTTGTCTT GAAAATATCTGCTCTGCAAGGTtaggtatgtttttttttgcctttcaatt tattttcttttgtctttacAGATGGACTCGAACCCCATCATGTGTTCATA CAAGCTGGTCACAGTGGAGTTCAGTGTTTGGGGATTAGCATACCGGGTTG AAAGTTATGTACATTCCGTAAGTTCAGTaaatcgatttttaatcgaCTAA TAACTGGtttatttgcttgtttgttttttgagCCGTTCCAAGAAATTGTC AACCACGATTTGAGAGCCTATGGCGGATTGAACCGCCTCTATGGGTGCTA TCAAATGGTCCTAGAACCCTACTGGCGATATCCAGTTAAAAATGAGCGTG ATGTAACGTACCCCTTTTATCTGGAATTGCCTTATTTTAGCAGGGGGACA TTTGTTCGTTATTTTTTGAGGTTGTGAGCAAGTAATTGTTTTGACCAAga caatcgagcgattttacgaAATGCCCTCTACGATTTTTTGACAATCATTG CGAAGGGAAACTGAGAATTGCACAGATCTGATTGTTAAATGGGGTGTTAG TTTAGATTCTAAAGAACTGTTTATTTTTGTTCGTCCcgctttgtttgttt taaaacaCTTTGCTAGGTTCCATGCATCTAGCTTTACAGCTACATTCTTT ACTAATCGAGACctcataaaaagtttttcagtGGCTCGGTTGAATAGAAA GGTCTTGTATTTTTCTACCAAATCCAGATAACATTTACATTGTTTATCAG GTGATAAAAGATATTTTATTGGCAGGACATCGGCAAGCTTTCGCCTGGAT AGATGATTGGTATGGTAAGAAACCTTCGAAACTTTTTTGACATCCTTTCT GTATAAGTTgaacctctttaactcgaatactTCCCTAATTCGAACAACTG TTCTCGTCCCTTCGGTTGACAATGCCTTTTTGACATCCTTTCTGTAAATA CAGTGGAGGCTTCATAAGTCGAACCTCTGTAACTCGAATGCTTCCCTAAT TCGAACAacttttctcgtcccttcagttagcattgccttaaaaacttttt tgacatcCGTTCTTTACTTCTTGGTTTTCACCGTCTCATTTCGTATAGAA ATAAACCCTTCAtatgaaaaaattgattaaCTTTTCAGTCATTTTCCAAC CTTTTTAAAGGAACTTTAGTAAAAAAATTCCTTACTTTTTTCACAAAGGT TTTAGTTTCTTTAGGGATAATTTGAGAGTATAAGATCTCATTTATTTTTA CTAATCTTTCTCGGTTAGAGATGACGTTCGAGGATGTGAGGGCGTTCGAA AAACAATTACAAGAAGAGACCAACAAGAAAGTCATGGGAAGTAATGAAAA CATTGCCGCTGCTCCTACTTCTTGATGTCTATTGTACATCCCTCGAAACC CCCTTTGTGAGTGGTTGCAGTCGATAGTAAAGATAGCCAGTCCATCTCCT TCTCTTTCCGGACATCCATGTTATTATAAAGTATAGCATCCAGACAATAG TTATTCATGGCAGTTGCATGCATTAAAGACTGTCGATGAAATAATTGACA TTTACTTTAATGTCACCTTTGGAAGGTTGGCTGAAGATTCAAGAAGTACG ACATCCTTAGAATTGAAAGATAATATTTATCACTTGAATAGAATTTTGCA AATTAAACACATGAATTTAACATGgcacataaaaatttatttttatttta gaatatGTTATTTAGAGGATTACTGAATGTGTATTGGGTTGTTCTATTTT GATACCCATACAAGGGGGAGGAACCATTTCAAGctggaaaatattcttga aaaaGGAGGGTGGTTATCCCTGGAAAGctgcaaaatttgaacaaatacCC TTGGAAAATCTTTCTTAATACCCTTGAAGTAAGGGGGGGGCGAACTAAAA TCCTTTACCCTCTTAAACCCCCTAGAAATTTTTTTGGATCCCCTCCCCTG GAAAATGTTCCTCTTCCCTCCTCCTTGTATGAATATAAAATTGAATGGCc cattgtatatttttgaaacgCATTTAAATGTAGCTAACATTGGGGGCGGG AAAATTACCTACTAGATTATATTATTCATACacttttgagaaatattttc tattttcctCGATTTCATTCACCAAGGTTTCCTTATATCTAATTATGTCC AACAAGAAAACAACAATTAACAATTTGGTCTTTTCAATTGTTTAGAGgct ctttttcagatttttctattttcattgtttttttatttctattttttagt atttatgTTTTTCTGTTGTTGTATTTTTCATAGATACGTTTCAGGACCAA ATATTTTCTCACGAAAAACTCAAATTAATAATTTCTGACGAAATGTTCTT CTCTTTGGCGTATTGCTTTGGTAAGAAGGTGTCGTTGTTTTTTACCTTGG AAAGTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015325TCONS_00015325Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015325-proteinTCONS_00015325-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000210supercontigsc0000210:249419..260125 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PITPNC1cytoplasmic phosphatidylinositol transfer protein 1 isoform b Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
74.17 70.65 47.53 36.01 59.13 43.9 42.89 45.82 27.48 30.53 22.42 17.63 17.87 15.8 17.1 17.71 25.43 22.44 9.08 13.73 19.03 16.95 53.07 39.99 15.09 19.66 22.09 16.94 38.45 36.44