|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000083_pilon:1107197..1110059+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_019361 ID=XLOC_019361|Name=XLOC_019361|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2863bp|location=Sequence derived from alignment at sc0000083_pilon:1107197..1110059+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTCTTCACCTGCAGTTGATCTCAGAGGCCTTATTCAAAAATtagg
taaaaagtaaatatttttgctAGCTGATAAAGTGAAGTTGACCTGTTGTT
TTGATTCTTGatttaatcaaatttatttccaagggttttatttttatatt
caaaatcCTTATCatggtcaatttttttaatatttaggtAAACAATCTGA
AAGATACCAATAAAACTTACTGTTTTTCCAGTTTGGTGTAAAAGACACAT
CATTTTCAGGTCTTTAGCATTTAAGCTGACCTCTAatctaattttaaaat
caattactTTCCATAATATACAAGGTCATTCAATAGAAGACATCCAGAAA
CGAGCCTTAGAGAATATACTCTCCAAACTCCAGTACAACATTGTCACTAT
TGAAGACTTGCTGCATTACAAAGACTTGTACTCAagtttatttatgtttt
tgaatgaacacaAAGAGGAAGAGAAGGTCTTGAAACTCATCCAACAATTG
ACACAGGTGAGTTTGATTGTAACACCTTTTTATGAAAGAGTTTGATGCAG
TTTTGTCAGTTGCATCGTCATTGTCATTGTATGATTACAGGAAAACTGTG
ATTGAAAGGTATAAAGAGATGTTGCAATTGTGACAATCAGGCTGAATCAT
TTTAGACATGCGATAGCAGGTGCACGTCTCCACACACACCTGAAATATCT
GAGGAGTGCGATCAACCACACTCCATAAATTTAAACTTTACTGTTGAAAG
TGGTAGATATAGCACACCTTATCACACGtctaaattagaaaattttaaca
GTGTAattgaccacacgcctggaGTTTTCAAATGACAAAGTTTGGACCTT
CGACCTGAAAAGATGAAAGAATCTTATAACGCCAGTAACACAAGTATTTT
AATAATGTGAATTCCAAATTTATTCACTCGGGTTACAAGCATTGAAGCTC
CTCATTTACTATTTACTAAGTCTAAAAATTATTCTGTTATTTCATTCAGT
TCTCAAATGGAGCAAAACATGTTATATCTCTGGGTGGTGTTGAATTTTTT
GCATTGTATCGTGAAGATgtttcaaataatgaaaaactAGTTGAAATTGC
TGATCAGATTTCAGAGCAATTATTTTATTTACATGACGATGAGGCTGAAC
TACCATCTGATATTTCTTGCAATCAAACATCATCAAACGTAATCAAAGGT
AAGTGGttttattcttgttttaatGAAAATGCTTTGGAAAACAAGAGAAT
TTAATACTTTCATGAATTCTGATTGATCGGAATTTGGGTCGGCTTTGGGT
CTTtgaaatttacttttatttcattgaaattttagaTAAGAATGTGGAAT
ACATTCACAATGCATGCGCAAGTCTACTTCAATCATACCAGTATCAAAAA
TCACTTGGCAAAATCAATGATGATACCACAACACAACATGAAactgaatt
tgaattgaatAATATTCAAATAAGTAGTACCTCAATGCTGACTTCTAAAG
CTGAAGAGTCcggtaaagttttttttcatccaaggatgtgaaatcttttt
tcatcaaatctgGAATAAAAAATTGGGCTTCTTATATCCAACCTAAGCTT
AGGAGTCTATAGAATTATCTATCTTTATCAGAGTATTAAATTTTGTTATA
TACTGTTTTACTTCACTCGTTCAATCTAATCGTGAACTGCTAAATAAATT
TCACAGTGGCCCTCCTTGGAAGTGATTCTTTAGCTTCCCAAaagtaaatt
aatttttcagagcatgcccatagttcggaccccccctTTCCGAAACAATG
aagaagggggatcagaaattttcatgaaaaaagggGGGTAGCAAGGAAGG
AGGCGTAGTTTGAGAAGGGGGATAGTTTAAGAACAGGCTAGATTAAGAAG
GGGGCTAGTTTAAGAAGGGgagggggcttacatatatattgtagattatt
ttcaagcactgtttgttatgaaatttggtcttcatgaaaggaagttttct
gttagagtagtccgagtcaaaaagaagaaaaaagtttgttatttcgcttt
ctctctctaaagataaTTAAGATATATTTGTTAGctgtccaaaatccttg
ggataggcatttttaaaggatgAGGGGGTGTCAAGAAAGGGGATCAGatc
cctttccgcactatgatgCCACTGAACATCTTgatttattatttctttaa
atatgATATTGTATATACTGCATTTTTAAGGaacatttttgactttttaa
aactCTAAGTTTAATGTTTACAAGATCAACTCAACTCAATGCTAATGAAA
CTTTGGCTTTTCTCATGTTATAGAGGAATCAATATTTCAATGGATACCTT
TAACGAGTGGTGATCGTCAAATATTGTCAGTCACAGATAGTCGTCTTCAA
AGTGCTTCACCTACACTCATACTGCAATCGTGTGAATTCTTCAAATTTAT
CTTGTTGCATGATTTTCCAGCTGAAGTCTTCATTCAAAGACCTAACATTT
TGAAGGTTTGTTTTTCAATGATATATTCGAAAATTAGCTGAACATATTAT
GTTGTTTTTAAGATTGAGAATTTCTTTGCACTTGCACAATACTAAGTTAC
ACTTAGCCAGGCTTTATGTCTGGATTGGATAATGATATTCTGATTGCAAA
ACTGTTCTGGAACTTTTCTGGAACGTCATTTTAATAATGATAACatatat
tttgttttagagtctCCTTGCTGTTCTGAGCATTCATAAAACTAACAATT
TAGAcattgttgaaaatattttaagttcTCTACTGAAATTATCCAAGAAA
TTGTTCAGTCGCTTTTTGCAAAACAAAGATGTTGATATTTGGCAAAAACA
ATTTAGTAAGTGT Coding sequence (CDS) from alignment at sc0000083_pilon:1107197..1110059+ >XLOC_019361 ID=XLOC_019361|Name=XLOC_019361|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1884bp|location=Sequence derived from alignment at sc0000083_pilon:1107197..1110059+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTCTTCACCTGCAGTTGATCTCAGAGGCCTTATTCAAAAATtagA
TGGATTCTTCACCTGCAGTTGATCTCAGAGGCCTTATTCAAAAATtagGT
CATTCAATAGAAGACATCCAGAAACGAGCCTTAGAGAATATACTCTCCAA
ACTCCAGTACAACATTGTCACTATTGAAGACTTGCTGCATTACAAAGACT
TGTACTCAagtttatttatgtttttgaatgaacacaAAGAGGAAGAGAAG
GTCTTGAAACTCATCCAACAATTGACACAGGTCATTCAATAGAAGACATC
CAGAAACGAGCCTTAGAGAATATACTCTCCAAACTCCAGTACAACATTGT
CACTATTGAAGACTTGCTGCATTACAAAGACTTGTACTCAagtttattta
tgtttttgaatgaacacaAAGAGGAAGAGAAGGTCTTGAAACTCATCCAA
CAATTGACACAGTTCTCAAATGGAGCAAAACATGTTATATCTCTGGGTGG
TGTTGAATTTTTTGCATTGTATCGTGAAGATgtttcaaataatgaaaaac
tAGTTGAAATTGCTGATCAGATTTCAGAGCAATTATTTTATTTACATGAC
GATGAGGCTGAACTACCATCTGATATTTCTTGCAATCAAACATCATCAAA
CGTAATCAAAGTTCTCAAATGGAGCAAAACATGTTATATCTCTGGGTGGT
GTTGAATTTTTTGCATTGTATCGTGAAGATgtttcaaataatgaaaaact
AGTTGAAATTGCTGATCAGATTTCAGAGCAATTATTTTATTTACATGACG
ATGAGGCTGAACTACCATCTGATATTTCTTGCAATCAAACATCATCAAAC
GTAATCAAAGaTAAGAATGTGGAATACATTCACAATGCATGCGCAAGTCT
ACTTCAATCATACCAGTATCAAAAATCACTTGGCAAAATCAATGATGATA
CCACAACACAACATGAAactgaatttgaattgaatAATATTCAAATAAGT
AGTACCTCAATGCTGACTTCTAAAGCTGAAGAGTCcgaTAAGAATGTGGA
ATACATTCACAATGCATGCGCAAGTCTACTTCAATCATACCAGTATCAAA
AATCACTTGGCAAAATCAATGATGATACCACAACACAACATGAAactgaa
tttgaattgaatAATATTCAAATAAGTAGTACCTCAATGCTGACTTCTAA
AGCTGAAGAGTCcgAGGAATCAATATTTCAATGGATACCTTTAACGAGTG
GTGATCGTCAAATATTGTCAGTCACAGATAGTCGTCTTCAAAGTGCTTCA
CCTACACTCATACTGCAATCGTGTGAATTCTTCAAATTTATCTTGTTGCA
TGATTTTCCAGCTGAAGTCTTCATTCAAAGACCTAACATTTTGAAGAGGA
ATCAATATTTCAATGGATACCTTTAACGAGTGGTGATCGTCAAATATTGT
CAGTCACAGATAGTCGTCTTCAAAGTGCTTCACCTACACTCATACTGCAA
TCGTGTGAATTCTTCAAATTTATCTTGTTGCATGATTTTCCAGCTGAAGT
CTTCATTCAAAGACCTAACATTTTGAAGagtctCCTTGCTGTTCTGAGCA
TTCATAAAACTAACAATTTAGAcattgttgaaaatattttaagttcTCTA
CTGAAATTATCCAAGAAATTGTTCAGTCGCTTTTTGCAAAACAAAGATGT
TGATATTTGGCAAAAACAATTTAGTAAGTGTagtctCCTTGCTGTTCTGA
GCATTCATAAAACTAACAATTTAGAcattgttgaaaatattttaagttcT
CTACTGAAATTATCCAAGAAATTGTTCAGTCGCTTTTTGCAAAACAAAGA
TGTTGATATTTGGCAAAAACAATTTAGTAAGTGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000083_pilon | genome | sc0000083_pilon:1107197..1110059 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 790-942:2711 |
| Aaloc | 610-789:2326 |
| Aaloc | 433-606:1338 |
| Aaloc | 232-429:1000 |
| Aaloc | 52-231:327 |
| Aaloc | 1-48:1 |
|
