XLOC_033536 (gene) - C. hemisphaerica

Overview
NameXLOC_033536
Unique NameXLOC_033536
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_226:4399..7798+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033536 ID=XLOC_033536|Name=XLOC_033536|organism=Clytia hemisphaerica|type=gene|length=3400bp|location=Sequence derived from alignment at scaffold_226:4399..7798+ (Clytia hemisphaerica)
AGATTTTAGGCGTGCGATCGTAGCACACGCACTGTTTTACTCATGGCCAG
GCCtgagtgtcatttagtttttgctggctgatagaatgACANTTGCACCT
GAAGgaatcactttcgatttcccaaAATGTGACGTTCGAGCAAATCCACC
AGCAAAAATCACATGGAAAAGAATCTTTTGGCCGTTACCAGCTGGTCGTT
TCACAGTTCAAGGAGACAATCTGAAGATATCGAATATCCAGTTCAAAGAC
GAAGGATTTTATGTTTGTGAAGCTGAAAACTTCCTTGGTAAGATACAACG
GTGAAATTCTCGTCATCGTAAATTAGATGAAAAGACTTtttagattttcc
aaaattttaccaaaaaacattttttcgttttgctcactttttacacccta
aAAGTGCACTTTCACTCATCTTCATTCATTTTGATCCGTATAttacattg
ggcttttccagaaatagtccatgccccccccccctgttaaggatatcgga
tatccagggggttaacgatttttgttcaaaagtggatatccagggggtta
aatatctacaagggagtggATATCCaaggggtaaagtgtcttttctaagt
aaaaaatacgatatccagggggtaagcatctttataagaaaggatgtcca
gggggttgagcatattctTTAAGAATAGAATGTCCGGGTTCGGGGGTAAA
ATTGTTTTAGGGGAAAtcccatttttttttattttgaaaaacataccctt
aagtAGGTCATtgaccttgagtgccccccgtCCCTGTGGAGAAATAAAAG
GcataaaatgctaaaatttgagTGAGTCCGTGTGGGGATACAAAATCTTG
ATAATGCATAACATTGGATATTCTTATACAATTCATTAATGATTAATTTT
CAGGAAAAACAAAAGCGAACATCCAACTAAAAATTAAGGCAATGGAAATC
GAAAAATCATCACCAGCCTTTATCAAACTAAAGAGAGGTCAAGTTGTAGA
GATCCACTGCTCAGCATACGGAAACAGCCAAAGTATGTCCGGTAAAATTA
CCCGGGTAGGATCCAGTGCACTTATTCAAGAAGAGACAACTAGAACACCG
AACTTGATTTCGGTTAAAGCTTCTTTTCGTGAAGAGGGAACTTACCGCTG
CACGATTAAAAACAACAAGAGTGGAAAACAAGTTGAAGCTTTTTCGCGAG
TTGGTGAGTAAAAATCTTTTTAGGTGGTTTTAGTTAGAAAATGGAACTGT
TCAGAGTAATAGTAAAACATGTATAATATCAAGGTTTTGAAATATCCAAT
TAAATTTATATGATTTCACGCACATAAATAGAGTCATAAAGTATAAACTA
AGTCAAATATGCATGAAAATACTTTTGATTTCTATCTTTTATGGAAACAG
AGGAATGTCATAGTGGCTGGACAAAGTATTCAGGGAATTGCTATGTGTAC
ATAGATCAAAAGAAGACCTGGAATAATGCAGAGTCATATTGTATTTCAAA
AGGAGGTCATTTGGCAAGTATTATGGACAAAGGAGAGAATGATTTTGTGT
ATGGATTGACACCTGGTAAAAAGAATGATTACTGGATAGGTAAGTGAGTT
TGGAATTGCAAAAACAATGGTTTTTAATTACCATAATGGTAACCAAAGGT
CTTTAATTACCAGAATAGTAACCAAAGTTCTTTAATTACCAGAACGGTAA
CCAAAGGTTTTTAATTACCAGAATGGTAACCataggtttttcatttttca
ttaccAGAATGGTAACCAGAGGTTTTTCACTACCAGAATGGTAACCATAG
GTTTTTAATTACCAGAATGGAAACCAAAGGTCTTTAATTACCGGAATGGT
AACCAAAGGTCTTTAATTACCAGAATGGTAACCAAAGGTTATTAATTACC
AGAATGGAAACCATAGGTTTTCATTATCAGAATGGTAACCAGaggctttt
catttttttgtataaCCAGAATGGTAACCATAGATTTTTCATTATCAGAA
TGGCACCATAGGTTTTTCATTACCTGAATGGCAACCATAGGTTTTCATTA
TCAGAATGGTAACCAGAGGTTTTTCATTACCAAAATGGTAACCATAGGAT
TTTCATTATCAGAATGGTAACCAGAGGTTTTTCATTACCTGAATGGCTTA
AAACAACAGCTTAtacatagcctggatatccaagctttaaactatttcac
agtctattttttgatattttatgttctggtttacagcctggtctccatag
agcgatttgcattctcagatcagaatgcagttcgcttgcttgcgctcact
ccGCTTAAGTCGTAAGGGCTGATCTACATGGCGTGGAGCAATTCTGCAAC
AAAAATGGGTCAATCCCCCCCTTGTTAGTGTAGATATAGCTACAAAGCTA
CAAACGTACAAAGTTTACCTAACTCGTTTTATTAACTCAAAGAGTGTGTG
TACCATTATATTAATGTAAACGTTTTATAAATCCAACTCTGATGAATTGA
GTTCTtatatttttataggtttgacAGATATGCGGTCTGAAGGCTCATTT
TCTCGatggagtgattcttcaattgtAACATACAAGAATTTTGCAAACGG
TCAGCCGAACAATGGAGGTCACAATAGATGGTACAGTCAAGACTGTGTAT
CGTTTTTATATAGTGATGCATACAAATGGAATGACTGGGAATGCAGTAAA
GAATTTGCATTTGTTTGTAAAGCGACAATGTAGACCAATTTAAAGCCAAA
CCATTGTGGGAGTAGATTTTTGATGAATAAAATCTCACATATGTAATCTT
CACTATATCTACTGGCTTGTATGAGACGTTTTTTACAAGCAttggccatt
ccattttatatccatacacaTACACGGAGTGGGCGAACATTTCCAGGGCG
AAAATATTGTGTTCCAGGGATGAATTGAAACGTTTTAGGAATTTCCAAGG
GTTCCAAGGACCTGATttaaatttccagggggtttgatTTATTCGAAAAC
ATTTAGGGAATAAAAGACTGAAATTAGTTAGTCCACCCTCACTTCAAAGG
TACCGAGAAGAATATTGTCCTTTTACAAATTTTGCCATTATCATATTCCA
CATATTtccaagaatttcttttggcTTGAAAAAGTTTGACCACTCCCGCC
CGTATATATCTcaaatggaacagcccattatagggtaaattttgtttact
tgttaagttaagaaaaaactgttcaattattttttgtatAAAGTACTTTT
AGTacatttagaaaatattttgaagcaCTGCTGAAATTTTACCTCAACNG
TACTTTTAGTacatttagaaaatattttgaagcaCTGCTGAAATTTTACC
TCAACCTTATGATTTCCAAAGCTTTagcaaaaaatgacaaaatttaaaGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053094TCONS_00053094Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053094-proteinTCONS_00053094-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_226supercontigscaffold_226:4399..7798 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.47	0.31	0.49	0.35	0.07	0.05	2.9	3.05	11.99	15	18.1	9.93	43.78	38.79	60.32	58.16	12.52	13.48	18.36	22.71	14.13	11.85	17.14	16.4	31.06	24.66	6.68	10.93	109.4	123.62