|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:1606043..1609449- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_030417 ID=XLOC_030417|Name=XLOC_030417|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3407bp|location=Sequence derived from alignment at sc0000043_pilon:1606043..1609449- (Clytia hemisphaerica_ch_hm2_pilon)
ATTCTCTCTATTTATATTCAATTTAGCAAAATAAATAGAGATAATATGAT
TAATAGCGATATTGACGATTTTGACACAATTGGTTTTGATTCTGAAAGTG
AAGATGAAAGTAACACTCGTCCTCCGAGGAAAGATTTTTGGAGTAATCAT
GAATATGGCTATGGAATCGATGATCTACAAAGTGACGCCGAAGATGAAAG
TGAATTTGGGCTGCATGCAGTAAGTAATAGTTGGTTACTAAAGGGAATCA
TATAGTAATATATTTCCACAATTCTTTTTCTCACACACTTTTACCATATT
ATAATTGACACTTGCCAATCCTTTGTGATTTTCCATTTTTTCTACATTTT
AAGACTATAGCAGTGATCATCAATTTGTCATCAAAAATTTTATTTTTCGT
TTTTTCTTTAGTTGAAGAATCTTGAAGTATTTTTGAAGACAATCAGAACA
ACGGCTTCAAATGTTAAAAACGAACAATTGGAAACGTCAAAATTAACACA
GTTGACTTCGCTTCTATCTATGGTATCACTTTGAAATTTTAATTTTCCTC
CATTTTATGACCTCTGAAAGCTGTAAATACTGCTATAATTAAAGGATATT
TCAAAATCTATCTGGAATTTTTTTTCTGCCAGACCTTTGAGATGAATGTT
GATGTGGAGTGCTAAATTCTTTAGCTCCAAATCATTTACCAGATATCGCC
TAGAAAATTTTGCCAGATAATAACCTTGTGATGACTGGCTCTCAATTTTC
ATCTGTTTTTTTTTTAGATAAGCAAAACTCGTGAAAGATTCTTTGGTCAT
GTCTTATCCCCATCTGCAGATGGTATTGATTTTGAAGACTTTAATCTCGT
TACTAAATATATGAGCACTGCCAACAAAACATTACCATCGAATCAACAAT
TCAAATTTTACCTAGCCAAGATGTATAATAAGAATACAAATAAACTGGAC
TTTCGAAAAAGAATCATGACTGGTAAGTAAATCATTGTCGTGAAATCATA
TTGAATAGTGCTCAATGATAAACAAACAAGATACCAGAGCCAAGTAAAAT
TTAAAAGTTTTCTTTCTATAAAAGTACATAACTTAAAGTTTCGTGCTTCT
GCACTTGTTCGAATGTAATTTGTATATGAAAAAATCTGCGTGTAAAAGTT
TAAAAAATGTTTAGAAAAATCTTTCTACTTGCTTTTTAAATGTTTTTTTC
GACCAAATGCAGGTATCCAATATTATGTTCATTAAACTATTCTACCTTTT
CTTTTTACAGGAGACAAGGTTTACATCTACAAAACGTGCCTTAAAGAAGC
TGTGAGATGCGATGGTAAGACTTTCGATTTCTCCGACATACCTGTAAACA
AATTGGACTTGATCGGACCATCTGTGAATTGGGAGAAGGAAGATTCAGAG
AAAACAATTCTTTTAGGAATACCATTCAATCACCAGTTCGAGTCGTTTTG
TGTTTCGAAATCACCGCTACTCAGTGGTCAATTTTTGCTTCAAGAAGTAG
ACCATTCTACATCGAAGTTCAATGAATATCTAGAGACATTTTTGCACAAA
TATCCAGTCGTCGATCATCGAAACGATGTACAATATCTCGTCACTTTGAT
AAAACTGTTAACAAAAGCTTGCAATTTTAGAGCAACCTTATCCTTTTTAA
GAGAGATTTTCTGCATTCAGCATACGAAAGAGGATTTTCAACCACCAGTA
GGGGTTGAAAATGCCCTTGGCAAGCTGCTCCAAACTGTCCCTTGGGAAAA
CTTGAAAGACATAATTGAGAACGCTTTCTCCCAAATTGGTTCCTCGCAGT
ATTTGATATGGACGAACATCGCCACATCCTCGGGAATTCCAGAACTGATC
AATTCAATGATTGCCATAGTTTTTTCCAACATTGTTGAAGCACATGACAA
TTATGAAAATTACCGAGAAGAGGTTGTTCATGATAATCGCCGTCTTTGGC
AAATCATTTTTCACCAGGTTTGCAATGAACAACCAATGTTCGACCGCTGG
TTTGATTTATTTTTGAAATCGGAAGAAATTTTGAAAAACAACCATCTGGT
TTTGCAATTAACAATTGAAACTATTAAAACCCGAGATGATTCACTCCACC
CAAAGATGTTATATTTGTTTAAAAAATGCATCAAATCATTTGAAGACAAA
AGGGTGTTTGGTTTCGCCGATCATTTCAGCTACCCAATAATCCTCACCGA
ACTTTTTCGAGCTCTTTGTGAAAACTTTGATCACTTCAAGAAAGAATTAG
ATCAATTGTGTTCCTGTCTTCTCTCCAAAATGATTCATCGTGATTATTGT
TTAAAACCACTGTTAGAATTGTCAACATGCCGGTTTGACAATTTGGATGG
GTTCACTATGGTTTTAAATGCTTACTTAGATAATTGTCTTGAAACAGACT
TTGAAGGGTCAGAAGGTGAAATAGAGGAGATGGCCAGCTTAACAAAGATT
TTGCTAAATGGGAATGTCTTTGATGAAAAACTTGTTAAAAAATTCCTCAC
TTATTTTGGAAGAGTAGAACGTTGGGAAACTCATTATGAACTCTTAACTG
ATGCTTGTAATGTGACTTATTATAAAATTCTGTTATTTTTGATTTCCAAT
GATGATTGGGAACCTTCGTTGGAGATATTGAGAACTTTGCTTGAAGCTGG
TATAGTGAAAAAGTACTTTGATGACCACATGGACTTGATGTATGAAATGA
AGATACGTAATACGGAGAACTTTAAAGAATTTCTCAGATTTACCATCAAT
TCAATGGATATTTTGTTTGTCGATGGTGCAAAACGTAATAAACTTTCAAC
TTTAACTTACAATCATATACGCAAACTCGTTCGATTGTTGCTGAAAAACG
CTTGTTTCTCCGATGTTGTTCCCCACTTGCTTGCTTCCAAAGTATTCCAA
GTCAACGGAACTCTAAATTTCTTCATTTACAAAAAGAAAAGCGTCTTACA
AAACCTCATCGTCGACTTGAAAGCAGATTTTGGAATGATGAAGGCATACG
GATCGCTTCTCCTTGTTCGTGCTCTTACCTTAAAGTCTAACGCCATCAAA
CCGCAACTATGTTGGAAGCAGCCTAATGCAGAGATCCGTAACCACCCTGT
AGTAACCGCTTTTTTAAAAGGAGATAACGACACCTTCATTTATCATAATC
CTGACGCCTTTCCAACCATGGATGAAGCTAGGCGGTGGATTGGACAAAAA
ACTCATTGCATATTTTCTGATGATTCGTCAGATTTTACCGGCATCGCAAG
ACAGGTTGATGGCGTGATTGAAGTGGTTCTACAGAAAAAACAGACAGAAT
ATCAGAAGCAATTGAAAGAGTATGCTAAACGGTTGGCAGAGCTTGAAAGG
TTGAAGAGGGAGTTGAAATCATCTTTCCCTGGTTTGTTTACAGTTTGTTG
CAAATGA Coding sequence (CDS) from alignment at sc0000043_pilon:1606043..1609449- >XLOC_030417 ID=XLOC_030417|Name=XLOC_030417|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5364bp|location=Sequence derived from alignment at sc0000043_pilon:1606043..1609449- (Clytia hemisphaerica_ch_hm2_pilon)
ATTCTCTCTATTTATATTCAATTTAGCAAAATAAATAGAGATAATATGAT
TAATAGCGATATTGACGATTTTGACACAATTGGTTTTGATTCTGAAAGTG
AAGATGAAAGTAACACTCGTCCTCCGAGGAAAGATTTTTGGAGTAATCAT
GAATATGGCTATGGAATCGATGATCTACAAAGTGACGCCGAAGATGAAAG
TGAATTTGGGCTGCATGCAATTCTCTCTATTTATATTCAATTTAGCAAAA
TAAATAGAGATAATATGATTAATAGCGATATTGACGATTTTGACACAATT
GGTTTTGATTCTGAAAGTGAAGATGAAAGTAACACTCGTCCTCCGAGGAA
AGATTTTTGGAGTAATCATGAATATGGCTATGGAATCGATGATCTACAAA
GTGACGCCGAAGATGAAAGTGAATTTGGGCTGCATGCATTGAAGAATCTT
GAAGTATTTTTGAAGACAATCAGAACAACGGCTTCAAATGTTAAAAACGA
ACAATTGGAAACGTCAAAATTAACACAGTTGACTTCGCTTCTATCTATGT
TGAAGAATCTTGAAGTATTTTTGAAGACAATCAGAACAACGGCTTCAAAT
GTTAAAAACGAACAATTGGAAACGTCAAAATTAACACAGTTGACTTCGCT
TCTATCTATGATAAGCAAAACTCGTGAAAGATTCTTTGGTCATGTCTTAT
CCCCATCTGCAGATGGTATTGATTTTGAAGACTTTAATCTCGTTACTAAA
TATATGAGCACTGCCAACAAAACATTACCATCGAATCAACAATTCAAATT
TTACCTAGCCAAGATGTATAATAAGAATACAAATAAACTGGACTTTCGAA
AAAGAATCATGACTGATAAGCAAAACTCGTGAAAGATTCTTTGGTCATGT
CTTATCCCCATCTGCAGATGGTATTGATTTTGAAGACTTTAATCTCGTTA
CTAAATATATGAGCACTGCCAACAAAACATTACCATCGAATCAACAATTC
AAATTTTACCTAGCCAAGATGTATAATAAGAATACAAATAAACTGGACTT
TCGAAAAAGAATCATGACTGGAGACAAGGTTTACATCTACAAAACGTGCC
TTAAAGAAGCTGTGAGATGCGATGGTAAGACTTTCGATTTCTCCGACATA
CCTGTAAACAAATTGGACTTGATCGGACCATCTGTGAATTGGGAGAAGGA
AGATTCAGAGAAAACAATTCTTTTAGGAATACCATTCAATCACCAGTTCG
AGTCGTTTTGTGTTTCGAAATCACCGCTACTCAGTGGTCAATTTTTGCTT
CAAGAAGTAGACCATTCTACATCGAAGTTCAATGAATATCTAGAGACATT
TTTGCACAAATATCCAGTCGTCGATCATCGAAACGATGTACAATATCTCG
TCACTTTGATAAAACTGTTAACAAAAGCTTGCAATTTTAGAGCAACCTTA
TCCTTTTTAAGAGAGATTTTCTGCATTCAGCATACGAAAGAGGATTTTCA
ACCACCAGTAGGGGTTGAAAATGCCCTTGGCAAGCTGCTCCAAACTGTCC
CTTGGGAAAACTTGAAAGACATAATTGAGAACGCTTTCTCCCAAATTGGT
TCCTCGCAGTATTTGATATGGACGAACATCGCCACATCCTCGGGAATTCC
AGAACTGATCAATTCAATGATTGCCATAGTTTTTTCCAACATTGTTGAAG
CACATGACAATTATGAAAATTACCGAGAAGAGGTTGTTCATGATAATCGC
CGTCTTTGGCAAATCATTTTTCACCAGGTTTGCAATGAACAACCAATGTT
CGACCGCTGGTTTGATTTATTTTTGAAATCGGAAGAAATTTTGAAAAACA
ACCATCTGGTTTTGCAATTAACAATTGAAACTATTAAAACCCGAGATGAT
TCACTCCACCCAAAGATGTTATATTTGTTTAAAAAATGCATCAAATCATT
TGAAGACAAAAGGGTGTTTGGTTTCGCCGATCATTTCAGCTACCCAATAA
TCCTCACCGAACTTTTTCGAGCTCTTTGTGAAAACTTTGATCACTTCAAG
AAAGAATTAGATCAATTGTGTTCCTGTCTTCTCTCCAAAATGATTCATCG
TGATTATTGTTTAAAACCACTGTTAGAATTGTCAACATGCCGGTTTGACA
ATTTGGATGGGTTCACTATGGTTTTAAATGCTTACTTAGATAATTGTCTT
GAAACAGACTTTGAAGGGTCAGAAGGTGAAATAGAGGAGATGGCCAGCTT
AACAAAGATTTTGCTAAATGGGAATGTCTTTGATGAAAAACTTGTTAAAA
AATTCCTCACTTATTTTGGAAGAGTAGAACGTTGGGAAACTCATTATGAA
CTCTTAACTGATGCTTGTAATGTGACTTATTATAAAATTCTGTTATTTTT
GATTTCCAATGATGATTGGGAACCTTCGTTGGAGATATTGAGAACTTTGC
TTGAAGCTGGTATAGTGAAAAAGTACTTTGATGACCACATGGACTTGATG
TATGAAATGAAGATACGTAATACGGAGAACTTTAAAGAATTTCTCAGATT
TACCATCAATTCAATGGATATTTTGTTTGTCGATGGTGCAAAACGTAATA
AACTTTCAACTTTAACTTACAATCATATACGCAAACTCGTTCGATTGTTG
CTGAAAAACGCTTGTTTCTCCGATGTTGTTCCCCACTTGCTTGCTTCCAA
AGTATTCCAAGTCAACGGAACTCTAAATTTCTTCATTTACAAAAAGAAAA
GCGTCTTACAAAACCTCATCGTCGACTTGAAAGCAGATTTTGGAATGATG
AAGGCATACGGATCGCTTCTCCTTGTTCGTGCTCTTACCTTAAAGTCTAA
CGCCATCAAACCGCAACTATGTTGGAAGCAGCCTAATGCAGAGATCCGTA
ACCACCCTGTAGTAACCGCTTTTTTAAAAGGAGATAACGACACCTTCATT
TATCATAATCCTGACGCCTTTCCAACCATGGATGAAGCTAGGCGGTGGAT
TGGACAAAAAACTCATTGCATATTTTCTGATGATTCGTCAGATTTTACCG
GCATCGCAAGACAGGTTGATGGCGTGATTGAAGTGGTTCTACAGAAAAAA
CAGACAGAATATCAGAAGCAATTGAAAGAGTATGCTAAACGGTTGGCAGA
GCTTGAAAGGTTGAAGAGGGAGTTGAAATCATCTTTCCCTGGTTTGTTTA
CAGTTTGTTGCAAATGAGAGACAAGGTTTACATCTACAAAACGTGCCTTA
AAGAAGCTGTGAGATGCGATGGTAAGACTTTCGATTTCTCCGACATACCT
GTAAACAAATTGGACTTGATCGGACCATCTGTGAATTGGGAGAAGGAAGA
TTCAGAGAAAACAATTCTTTTAGGAATACCATTCAATCACCAGTTCGAGT
CGTTTTGTGTTTCGAAATCACCGCTACTCAGTGGTCAATTTTTGCTTCAA
GAAGTAGACCATTCTACATCGAAGTTCAATGAATATCTAGAGACATTTTT
GCACAAATATCCAGTCGTCGATCATCGAAACGATGTACAATATCTCGTCA
CTTTGATAAAACTGTTAACAAAAGCTTGCAATTTTAGAGCAACCTTATCC
TTTTTAAGAGAGATTTTCTGCATTCAGCATACGAAAGAGGATTTTCAACC
ACCAGTAGGGGTTGAAAATGCCCTTGGCAAGCTGCTCCAAACTGTCCCTT
GGGAAAACTTGAAAGACATAATTGAGAACGCTTTCTCCCAAATTGGTTCC
TCGCAGTATTTGATATGGACGAACATCGCCACATCCTCGGGAATTCCAGA
ACTGATCAATTCAATGATTGCCATAGTTTTTTCCAACATTGTTGAAGCAC
ATGACAATTATGAAAATTACCGAGAAGAGGTTGTTCATGATAATCGCCGT
CTTTGGCAAATCATTTTTCACCAGGTTTGCAATGAACAACCAATGTTCGA
CCGCTGGTTTGATTTATTTTTGAAATCGGAAGAAATTTTGAAAAACAACC
ATCTGGTTTTGCAATTAACAATTGAAACTATTAAAACCCGAGATGATTCA
CTCCACCCAAAGATGTTATATTTGTTTAAAAAATGCATCAAATCATTTGA
AGACAAAAGGGTGTTTGGTTTCGCCGATCATTTCAGCTACCCAATAATCC
TCACCGAACTTTTTCGAGCTCTTTGTGAAAACTTTGATCACTTCAAGAAA
GAATTAGATCAATTGTGTTCCTGTCTTCTCTCCAAAATGATTCATCGTGA
TTATTGTTTAAAACCACTGTTAGAATTGTCAACATGCCGGTTTGACAATT
TGGATGGGTTCACTATGGTTTTAAATGCTTACTTAGATAATTGTCTTGAA
ACAGACTTTGAAGGGTCAGAAGGTGAAATAGAGGAGATGGCCAGCTTAAC
AAAGATTTTGCTAAATGGGAATGTCTTTGATGAAAAACTTGTTAAAAAAT
TCCTCACTTATTTTGGAAGAGTAGAACGTTGGGAAACTCATTATGAACTC
TTAACTGATGCTTGTAATGTGACTTATTATAAAATTCTGTTATTTTTGAT
TTCCAATGATGATTGGGAACCTTCGTTGGAGATATTGAGAACTTTGCTTG
AAGCTGGTATAGTGAAAAAGTACTTTGATGACCACATGGACTTGATGTAT
GAAATGAAGATACGTAATACGGAGAACTTTAAAGAATTTCTCAGATTTAC
CATCAATTCAATGGATATTTTGTTTGTCGATGGTGCAAAACGTAATAAAC
TTTCAACTTTAACTTACAATCATATACGCAAACTCGTTCGATTGTTGCTG
AAAAACGCTTGTTTCTCCGATGTTGTTCCCCACTTGCTTGCTTCCAAAGT
ATTCCAAGTCAACGGAACTCTAAATTTCTTCATTTACAAAAAGAAAAGCG
TCTTACAAAACCTCATCGTCGACTTGAAAGCAGATTTTGGAATGATGAAG
GCATACGGATCGCTTCTCCTTGTTCGTGCTCTTACCTTAAAGTCTAACGC
CATCAAACCGCAACTATGTTGGAAGCAGCCTAATGCAGAGATCCGTAACC
ACCCTGTAGTAACCGCTTTTTTAAAAGGAGATAACGACACCTTCATTTAT
CATAATCCTGACGCCTTTCCAACCATGGATGAAGCTAGGCGGTGGATTGG
ACAAAAAACTCATTGCATATTTTCTGATGATTCGTCAGATTTTACCGGCA
TCGCAAGACAGGTTGATGGCGTGATTGAAGTGGTTCTACAGAAAAAACAG
ACAGAATATCAGAAGCAATTGAAAGAGTATGCTAAACGGTTGGCAGAGCT
TGAAAGGTTGAAGAGGGAGTTGAAATCATCTTTCCCTGGTTTGTTTACAG
TTTGTTGCAAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:1606043..1609449 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 538-2682:2146 |
| Aaloc | 331-534:2641 |
| Aaloc | 220-330:2997 |
| Aaloc | 1-219:3408 |
|
