XLOC_031571 (mRNA) -

Overview
NameXLOC_031571
Unique NameXLOC_031571
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000112_pilon:886827..887787-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031571 ID=XLOC_031571|Name=XLOC_031571|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=961bp|location=Sequence derived from alignment at sc0000112_pilon:886827..887787- (Clytia hemisphaerica_ch_hm2_pilon)
ACAGACTCAGACGAAGACAGTGAGCTTGAAGAAGAAGCAGAAAATATCAC CAAAAAGAAAAAGAAATTGGATGAATTCAAATTGCCTGAAGAACGAAAAT TAGAAGAAGCTAGAATGGCCAGATTAGCTGTAAGTTATATTCACACTTCC CAGCTAGCACACAACGTTGTTTTAACGTTTATCTAACGTTCACAACGTCC ATATAACGTTAGATGAACGTTGAAACAACGTTGTGTGCCAGCTGGGTTAA TTTATACATTTTGTAAGTTGTTTTTTTACTTTTTTTAAGAACCGGTAAAA TTTAATTTTGGTGAGGCTCGGTTTGTTCTTTCTTTTTTGGCACTTTGAGC CTCAAACTGTTCTTATCCTGTTCTTATTTATAGGGTGTAGTTGGGGTATT TTAGGTTTTTTACCCAATTTTTACTACTTTGACCCCTAAATTCACACTTA TAAGTCATTTCTCAGTCTATACAAATGCTTTATGCTAATCAGAGCTGACT CAAATGATAGCTTCATGTCAGTCAAGAATTATGAAGGTTTATTGTGCCTT ATCAACTACAGGAAGTCATTCTTTAGTCAAATGGGATATGTACTAGGTTT GTGAGGTGACGGGTATGTCCAAGCCAAGTTTGAAAATTGACCCTTTGGGA GATTGAATTTCGAAAAAAATCGAAGAGAGAAGGCGAAAAGTGGACCAACT AAGCTAGCCCTTATATCACATGTCACTTCTATTTCATTTCAACAGGAAAA ACGTGTCAAACTTATTCTGAAGGAAATCATTATCCATTTCGCTTTCTTGA GTTTGTGTCTCATGGTGGCATATGCAGCTGCCGATCCTTACTCATTCAAT CTTGCCAAAGCAACCAAAGAAGCCGCGATGGAGAACGCCATTTTGAAATC ATACAAAGACGGTAAAGCTTACAATGAAGAAGTGCAAAGAGTTGTCAAAA ATGCTGACGGG

Coding sequence (CDS) from alignment at sc0000112_pilon:886827..887787-

>XLOC_031571 ID=XLOC_031571|Name=XLOC_031571|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=690bp|location=Sequence derived from alignment at sc0000112_pilon:886827..887787- (Clytia hemisphaerica_ch_hm2_pilon)
ACAGACTCAGACGAAGACAGTGAGCTTGAAGAAGAAGCAGAAAATATCAC
CAAAAAGAAAAAGAAATTGGATGAATTCAAATTGCCTGAAGAACGAAAAT
TAGAAGAAGCTAGAATGGCCAGATTAGCTACAGACTCAGACGAAGACAGT
GAGCTTGAAGAAGAAGCAGAAAATATCACCAAAAAGAAAAAGAAATTGGA
TGAATTCAAATTGCCTGAAGAACGAAAATTAGAAGAAGCTAGAATGGCCA
GATTAGCTGAAAAACGTGTCAAACTTATTCTGAAGGAAATCATTATCCAT
TTCGCTTTCTTGAGTTTGTGTCTCATGGTGGCATATGCAGCTGCCGATCC
TTACTCATTCAATCTTGCCAAAGCAACCAAAGAAGCCGCGATGGAGAACG
CCATTTTGAAATCATACAAAGACGGTAAAGCTTACAATGAAGAAGTGCAA
AGAGTTGTCAAAAATGCTGACGGGGAAAAACGTGTCAAACTTATTCTGAA
GGAAATCATTATCCATTTCGCTTTCTTGAGTTTGTGTCTCATGGTGGCAT
ATGCAGCTGCCGATCCTTACTCATTCAATCTTGCCAAAGCAACCAAAGAA
GCCGCGATGGAGAACGCCATTTTGAAATCATACAAAGACGGTAAAGCTTA
CAATGAAGAAGTGCAAAGAGTTGTCAAAAATGCTGACGGG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_031571XLOC_031571-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000112_pilongenomesc0000112_pilon:886827..887787 -
Properties
Property NameValue
Aaloc130-345:217
Aaloc1-129:962