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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000094_pilon:1221586..1222782- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042434 ID=XLOC_042434|Name=XLOC_042434|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1197bp|location=Sequence derived from alignment at sc0000094_pilon:1221586..1222782- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGAACAAAATTTTAGTGGCTATACTACTTGGAATAATTCAAGTGTC
GACTACCTGTGACGTCAATAATCGGGATGAATCGGGTACAAATGACGTCA
TTAATCGGGACGAATCGGGTAACAATGCTGTCGTTGGACGAGACGAAGAG
GCGGGAAGTACTTTAAGAAAATTAGAAGAGAAAATGTTCACTCAGTTGTT
GCGGGATGAACAGAGAAAAGAGAAAAAGAATATGGTATATTCTCCTTATG
GCATCTTCTCAATTATCAAATCAATGTCTGCACTACTGGACAAAGAGCAT
CGAGCTGCAGTTAAAACAGCTTTGGGACTAGATCCGAACCACGTGGACGT
TATCAAACCATCCATCACATCACCAGAGTTGAAAGAAGCGAATAAGATTT
GGATCGATTCGAAATTTGAATTAGATTCAGAAATGAAGAAGAAATACAAA
CAGATTATTGAGCAGATTGTCATGAAAGGACATGTAACGGAAACAAGAGA
TGTGATCAACAAATGGGTTTCAAATCACACTATGGGCATGATTAGGGAGC
TCTTAACACCAGACAGTATCATTACCGACTATTCTGTCCTCGTTGTCAAT
ACATTAGCATTTCATGGTCATTGGAAGATGCCGTTTAAACCTGAACAAAC
GAAAGAAATGGATTTCCATTTGAGTGAAAATGAGAAGGTTAAGGTCAAAA
TGATGTTCGGTTCAATCAAAGGGAGATTCCATCGTGGTGAGAACTTCGAA
ATTGTTGAGATCCCTTATGCAGGAGATAGATATAGTTTTTGTATAGTTCT
CCCTGGTCAGACGGACCCTGCCAAACGGAAGGATATTACAGAGATCTTGG
AATCTAAGATGACCAGGCCAATCAAAATACAAGTGTTTCTACCAAAATTT
AAAATCACAAGCGATTTTGTTCTTAATAAGGTTTTGAGAACAGCTGGGTT
CAATTCGTTGTTTTCTCGGATTGCTGCTGTGAAAAATGCTGACATCAATT
TCATGGATGTTATACAGAAAGTCGCCATTGAAGTGAATGAAGAAGGAACA
AAGGCTAGTGCTGGAAGTCTAGGAGCCTCTGGGCGTTCAATGCCATTACG
CGTTACAGTTGACAGACCGTTCGAGTTCATGATACGAGATGTGAAAGAGA
AAAAGACCCTTTTTCATGGTTTTGTTCAAAAACCTGAATTTGAATAA Coding sequence (CDS) from alignment at sc0000094_pilon:1221586..1222782- >XLOC_042434 ID=XLOC_042434|Name=XLOC_042434|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2394bp|location=Sequence derived from alignment at sc0000094_pilon:1221586..1222782- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGAACAAAATTTTAGTGGCTATACTACTTGGAATAATTCAAGTGTC
GACTACCTGTGACGTCAATAATCGGGATGAATCGGGTACAAATGACGTCA
TTAATCGGGACGAATCGGGTAACAATGCTGTCGTTGGACGAGACGAAGAG
GCGGGAAGTACTTTAAGAAAATTAGAAGAGAAAATGTTCACTCAGTTGTT
GCGGGATGAACAGAGAAAAGAGAAAAAGAATATGGTATATTCTCCTTATG
GCATCTTCTCAATTATCAAATCAATGTCTGCACTACTGGACAAAGAGCAT
CGAGCTGCAGTTAAAACAGCTTTGGGACTAGATCCGAACCACGTGGACGT
TATCAAACCATCCATCACATCACCAGAGTTGAAAGAAGCGAATAAGATTT
GGATCGATTCGAAATTTGAATTAGATTCAGAAATGAAGAAGAAATACAAA
CAGATTATTGAGCAGATTGTCATGAAAGGACATGTAACGGAAACAAGAGA
TGTGATCAACAAATGGGTTTCAAATCACACTATGGGCATGATTAGGGAGC
TCTTAACACCAGACAGTATCATTACCGACTATTCTGTCCTCGTTGTCAAT
ACATTAGCATTTCATGGTCATTGGAAGATGCCGTTTAAACCTGAACAAAC
GAAAGAAATGGATTTCCATTTGAGTGAAAATGAGAAGGTTAAGGTCAAAA
TGATGTTCGGTTCAATCAAAGGGAGATTCCATCGTGGTGAGAACTTCGAA
ATTGTTGAGATCCCTTATGCAGGAGATAGATATAGTTTTTGTATAGTTCT
CCCTGGTCAGACGGACCCTGCCAAACGGAAGGATATTACAGAGATCTTGG
AATCTAAGATGACCAGGCCAATCAAAATACAAGTGTTTCTACCAAAATTT
AAAATCACAAGCGATTTTGTTCTTAATAAGGTTTTGAGAACAGCTGGGTT
CAATTCGTTGTTTTCTCGGATTGCTGCTGTGAAAAATGCTGACATCAATT
TCATGGATGTTATACAGAAAGTCGCCATTGAAGTGAATGAAGAAGGAACA
AAGGCTAGTGCTGGAAGTCTAGGAGCCTCTGGGCGTTCAATGCCATTACG
CGTTACAGTTGACAGACCGTTCGAGTTCATGATACGAGATGTGAAAGAGA
AAAAGACCCTTTTTCATGGTTTTGTTCAAAAACCTGAATTTGAATAAATG
TTGAACAAAATTTTAGTGGCTATACTACTTGGAATAATTCAAGTGTCGAC
TACCTGTGACGTCAATAATCGGGATGAATCGGGTACAAATGACGTCATTA
ATCGGGACGAATCGGGTAACAATGCTGTCGTTGGACGAGACGAAGAGGCG
GGAAGTACTTTAAGAAAATTAGAAGAGAAAATGTTCACTCAGTTGTTGCG
GGATGAACAGAGAAAAGAGAAAAAGAATATGGTATATTCTCCTTATGGCA
TCTTCTCAATTATCAAATCAATGTCTGCACTACTGGACAAAGAGCATCGA
GCTGCAGTTAAAACAGCTTTGGGACTAGATCCGAACCACGTGGACGTTAT
CAAACCATCCATCACATCACCAGAGTTGAAAGAAGCGAATAAGATTTGGA
TCGATTCGAAATTTGAATTAGATTCAGAAATGAAGAAGAAATACAAACAG
ATTATTGAGCAGATTGTCATGAAAGGACATGTAACGGAAACAAGAGATGT
GATCAACAAATGGGTTTCAAATCACACTATGGGCATGATTAGGGAGCTCT
TAACACCAGACAGTATCATTACCGACTATTCTGTCCTCGTTGTCAATACA
TTAGCATTTCATGGTCATTGGAAGATGCCGTTTAAACCTGAACAAACGAA
AGAAATGGATTTCCATTTGAGTGAAAATGAGAAGGTTAAGGTCAAAATGA
TGTTCGGTTCAATCAAAGGGAGATTCCATCGTGGTGAGAACTTCGAAATT
GTTGAGATCCCTTATGCAGGAGATAGATATAGTTTTTGTATAGTTCTCCC
TGGTCAGACGGACCCTGCCAAACGGAAGGATATTACAGAGATCTTGGAAT
CTAAGATGACCAGGCCAATCAAAATACAAGTGTTTCTACCAAAATTTAAA
ATCACAAGCGATTTTGTTCTTAATAAGGTTTTGAGAACAGCTGGGTTCAA
TTCGTTGTTTTCTCGGATTGCTGCTGTGAAAAATGCTGACATCAATTTCA
TGGATGTTATACAGAAAGTCGCCATTGAAGTGAATGAAGAAGGAACAAAG
GCTAGTGCTGGAAGTCTAGGAGCCTCTGGGCGTTCAATGCCATTACGCGT
TACAGTTGACAGACCGTTCGAGTTCATGATACGAGATGTGAAAGAGAAAA
AGACCCTTTTTCATGGTTTTGTTCAAAAACCTGAATTTGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000094_pilon | genome | sc0000094_pilon:1221586..1222782 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 835-1200:367 |
| Aaloc | 1-831:1198 |
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