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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:601752..608461+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044125 ID=XLOC_044125|Name=XLOC_044125|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6710bp|location=Sequence derived from alignment at sc0000089_pilon:601752..608461+ (Clytia hemisphaerica_ch_hm2_pilon)
atgagTAGATGGAGAAGTACGTGTCCCGACAAATTACTGACCAGTATTGC
AAATATCTCAGAAGCTCGTTTGTACTTGTTGCGACAAACTGGTCCCACTG
GATTCCTTTTGAAAGAGCATGATGGCGAGACGAAGTTCAAGGTCTGGACA
TTTCCTACATTTTCTGGATCAACTAGAAATTTGCAAAGAATACTGCAGAT
TAAGAAATGCTTTCTGACAGTTAATTAGATGttctgtttttttgttttta
ggttttgctTGGCGCTGTTCACTCGTGCGattgtaatttctttttgaaag
agAGGGAGCTTTGTAAACACATCCTATGGTATGTGTTCTTTAACATCATT
TATGTCTCATTTCTGCGTCACCAAACataattatcaacaagaaaatATTG
AACGGATTTGACTCGGGGTGTTCCGGTCGTTTAGTTGTGAAGTGAGatgg
aatttaatttagttCCCGCTTCTATGCTGACTTcaaactttgtttttgtt
tttcaggattttaatCAGAAAATTTCGGATCCAAAAAGAAGATCCAAGTA
TGTAGTCTATCAGATCATTTAATATTTCCTCAGTTAGCACTAAAGTCTTT
ACACAGTTGAATGAAACAAATTGAAAGATCTTTAAACAAAGATTTCCCTC
AAAAAACGGTGCTTCATAAAACTCCCAATtagaccagggggggggggcac
gcagttactacaagacagtatgacacttactaccgtggtggtactgtatt
cagaagttatgactgctgtttgggggtggtgccaaacactaaaactagca
cttttgatgtagtaagtgcttatattttaattctttttaaagaaatttca
aaatttttcacaaaaaatttttttgtgaaaaaattatttgttaaaaaaat
tctttttgttataaatggacgaaaagaaatttgaaatttttctcagatcc
aactttgaaattatttttctgtaattatcattaaaatgttctcaacagct
gttaaccaagtaaattaaaagaaaatctagcacaaaatggtattaagttg
aaaaataattgcaatttagggtaatttcgagcatgtttttgatgatatca
ctcaaaaacaggggtggtacctggaaatcttttcagaaaacagttactac
caaggtgtagtaactgcaaagggtggtggtcctgaaaaaaattgttgaaa
aagcacttactacaaatcatgtcttgtagtaactgcgtgccccccccccc
tgattagACTGTTTATTGTTTtccttgaatatttttaaactcCTGCAACC
CAGGAAGAAAGAAAAGCGGTCAAACTATCCAAAcccttttgaaaaagatt
tgatttttattagTCGCGTTCCAGCTTGGTCTTTGTGAACGTGAGCTAAA
CCATGTTCTGTATGGTCAGAAGCAAGTTGAGAATAAACAACCAACCAAAG
CAGCATCTGCTGGTGCCAGAGAAATGTTGAAACAGAAGAAGATCGAGAAA
GAAGATGTCTGCCCCATCTGTCAAGATGAAATATACAAAACGAAAAAGAG
TTTAACTTACTGCAAGTATGTAAATTGTTTGTTTGATCTCAGAAGGCAGG
CACAAAGCAGGCGGCCACCTGACCACAtgatttcaaaataaagtcaGATC
CTGCTTAAATAACCTTTAAAAACAGACCTGTTTTagggctaaaattcaaa
aaagtgccTCCTTAGTCAATGTACAATTGTCACTTTCAAAGTAGAGCGGC
GGTCCCTGGAAAGCATTTAAGACACACAGAATTCTATTCAAAGATATTTA
CATTTTGCAAGCTTTTGAAAGGAATCTTTCCAGATAAACGtttaggaatt
ttattttttaggtttGGATGTGGAAACAGTGTTCACGTTTCCTGTCTCAA
GATTTGGGCTGACCATCAGCATAAATCAAACAACGAAGAAGTTATCAAGT
GCCCGCTCTGTCGAACCGAATTCGCTAGCTATAAAGTATGACAGTGACCT
CGTTTATTTCAAACTTTcgtttaatcaaatcccttggTGCAAAAATTTCC
CGTTTCGAATGTTTACCTTTTCTTTCATTATTTGTAGAGTATATTGCAAG
AACATCGTCGCTCTGTCACTCGATCTCAGATGAGAAAAAATTCCCTGCTC
AGTATTTGTGTTGGATGTAAACAAAGAGCTCCTTCTACATCTTCTACTCA
ATCTGTTTACAAGTGAGTTATCTTATGTTCACATCAGAAGGCGTGGATAT
TTCAACCtaaatttgctattttttcaaatttgaattttgaagggaaaaCA
TCTTTTAATAGTACGCCTCTTAAATTCTgtggaatttttctttttaaatt
tttcattttaaatctctcattttATTCTATGAAGTTTGAACATTTATCTG
ATTAAGACAAAAGTCAACTTAAAACCATTTGAGTCTACTAAATCACGTAC
CTCACGTGCCCTAGTGCCTTAACTTTTTTACGTGCCTCTAGTGTCCTAGT
GCCTCGCGCGCATTTAGTGCCCTAGTGTCCTAGTGCTTTAAAATTTCACA
TGTCCTAGTGCCCTAAAATTTTTACGTGCCCTAAAATTTTCACGTGTCCT
AAAATTTTCACTTGccctaaatttttcttttgcccCAAttttttttAGCG
ATATGAGGTCTTTCTTATCGGTATTTCGGGATTAAGTCGATAAGTACTCG
TGTATCGGTAATTGACAGCTTTTTTAGTGTCTCACGTGCCTCAAGTGCCC
TAGTGCCTTAAAATTTACCGTGCCCTAGTGCCCTAATTTTTTCGACTAAT
AACCTCAACctttggataattttcattaaacttATGTTGCCTTTCTAAAC
ACAGAAATTAGCTAATTAAAATATCGTTAAAgctttgtttcaaattttta
attactaACAGCCGAAATATCTGACctcttattattattattctgaATAT
TTTTGTTCGACGACCTCGAATCatttaaatgtataattataTCGCCGTTG
TGGAAAACAATTCTGAAAGAAAAACTAGCTGCTACGACAACGATCTCGGT
ATGAACTCAAATGTTTCCACGTAGCCGTTGCAGTTGCAGTTGCAGTTGTG
ACTTCGGAAACTCCGGAAGGTCCGggagttggaaaaaaatcgaaaaatta
ataaacgcccTTACCCCCTCCCGTTTATTCGGCACCTGCGAGCAAAGAGA
AAGAAAGTGAGAGAAAAAGTGTCAGCGAATACTGTTGACAAGTACTCGCT
TGTGACAAAATAATTGCCCCTTGTTTCGACTGCAATTTTTACAGCTATAA
GAACCGCTGACCACCACGTGCGCTGAGCGCCGAAAGCACGGTTATGTATA
AAAAGTTTAAATTCAAATGACGTAAATTCTCTACTTTTAAAAGattttag
caATCAGAACTCagctaaaaaaataatattttcgaaTAATGCAGAACGTT
ACATCTGCGTGAAACTACTACAATTCGGATGCATTCCTAAAAAGACGCTA
CAAAATATGCTACTGATCAAACGTTTTTCATAAGTCTATCGAAAATACAA
CAATTGTTTTTAACAAAACTAAAGtatgttcacgataagtgtgcactctc
tttttttttgtctatAACCTTTTAAGGATTGCTTCAGTCGTAATAAATTT
tgtaccgttggaaagatattaatgagtggaataatttgaattaaaaattg
ttttgaaaaatttcaaaaataaagatgaaaaaaagaagaaaaaaattaac
ttccTGTAGAATTGAGttataattttcctttttacaGGAATGAAACTCCA
ATCTTAGAGCATCATcactatgaaaatttttttcatatttttataaatat
tcattcaatgAAAATATATCAAATAAAGTTTGCCTCTACTTGACccaaaa
aaagagaataaaacaGGCTTTTTAGGGGTCAATCAGCTATAAAcattgtt
tgatatcttttgactgaaagaatatttttgaaaaatttgttcacAGTGAT
GACGCTCTAAGATTGGAGTTTCAttcctgtgaaaatgaaaattacaactc
aattctacaagaagtttatttttttcttcttcattttcacgtGAAAAACA
ATAGGCCACGTGAAAATTTAAGGGCACATGAAAAAGGGGTAAACCAGTCC
CAAAAAGTTGTGCgagacttttttgatttttctgtgatttttttgtgatt
cttgccaattttcacgtgatttggattttggatttttttcaagtaaatgt
gaaaaatttagAGCACGTGAAAACAAATTGGGTACGTAgaaaaaaatagg
gcacgtgaaaaaataaggcgcgtgaaaaaataaggcgcgtgaaaaaatag
gacacgtgaaaaatCCAGGGCACTTAAGGCACGCGAGGCACTAGGGCAAT
TGAGGCACTAGGGTACCAGAGGCACGTaaaaaaaGTTAAGGCACGTGAGG
CACGTGATTTAGCAGATTCAAACCATTTTAACCGCGCCAAGGATTGTGAG
CTTTATTTCGCATAACTTATTTCAGATGCAACACATGCAATTCGTTTCTT
TGTCAATCCTGTTTCCATCCAAATAAACATTATGGACAccaagtgaaaac
aaaacatgTAAGAACAACATTCATTCATTTCTAAGTTCATACTATCCAAT
ATAACTGCCAAATTTATTTCCGCTGATACTTATAAGTTCACCATATAATA
CAATAGATGATTTATTCTTGAAGTTAAACTCCTCCATTCAAGCCCTTCTC
GTAAAACTGTCAGATATGACAATTTTCACCACATTTGCATTCCAGCATCC
CACTAATCCCTCCTGTAAacaatggctttcactttcactttagGGAGGAG
GAGAGAAGTGGGAAGACTTGGGTTATAAAGAAGTTAATCTCTGTATTGGA
GGTTTCTCCTCTTCCATGACGTCATCACATGGCAAACAGTAAGTTGGTAT
TGATAGTTCTATCTAACTCTGTTTTAAACGATTTACAAGCCTTTGACCAA
TGAGGAAAAACGAATGTTTGCTTTTTAAAGACAAGTCgtgaaatttgatt
ttgtttgccaaaagattataaaattttcgttgtgacaaaattttgatgtc
tTGACGAATTGTAATTTGCTTTGTCATGATCTTTCGTTCAACTTCATCAA
TACACTGCAAGATCATGGTTTCATGAATCGATACACTGCAGAATCACTTA
CCCCatacttattttatttttctgttatgAAAATCTTAATCCCAATTTAC
CAAAGTCATTTTAAAAGGTAAGATATTTCTGAGAACGCAAAAATATCGAT
CATCCTTTTTACCCTCGAGATTACTACACTTTTCAACTTCCACTCTACAG
ATTTCCAAGCTCACCTTCAGCACCAGTGAGGCCGAAACAAAAATTATCAA
GACTTCGAAGTTCATCCCAAACTGACGTCCGTGATTTAGCCATCAGCGGA
CTCAGTCTAAACTCTGAAAAATTGGAACTAAACTATAAACCTGTTAGCGA
ACAAAGGTTTGTTTCTTtggaaatattatttttatcttGGAAATATTGTa
atgtaccttatcggggaaaacttcgtcggggaaaagtgacgaacttttgg
acaagtgacgaatattttccccgacgaaaattttcccagGCTTTAATGCg
attaccaactaccagcaagtgatgaatttttccccgacgcaaattttccc
cgacgaagttttccccgattaGGTAACCTAAATTGTTTAAATTGTCAATC
CAACTAAAACCTGAACACTGTAGTTTTCCCTTCTAGTATAGAATTTCAAA
TCAACTTACACGCGATCAAACTCTACATTTCCTTCTTCTTAGATCTTCAA
ACGCTTCTACTGCAAGATTTCGATTACCACCGATCGGGAAAACGAGAGGT
TTAATCGGAATGTCGGGGAAACATCGGAGTAAAAGTGGGACCGGGAATCA
AACAGAAGAACGGAAGGAAGTGGATGTAAGAAAATGAGATATTCTTTTTC
CCCATTGTTTGAAAGTGACTGACGTTTCTCCTATGCTTCGAAGAAAAATT
GTATCAATTTAGAAACCCTAGAGCATGTAATTTCTAGTAGTGTGGTGATC
CGAGTTCGATTCCCTCTTTAGTTTTAAGCTTCACTTGGTAGGTCAATGAA
GTGTAGGTCAAGCCATACCATATGATGGAAATTTGGTACCACTACTCACC
TTATACATTTTGGTGTATATGGCATTCATCTTATTCTACGCTCGCAACGG
GCTATATGCTCTCCCGCGTTTCGAGTGTCATCACTATGCATCATATAGTA
TCTGTGTCtcgcgtgcacagaaccagcggTGTCTGGATGGCGCTATGAAT
TCCAACTTCaaaaaggaggaattcctacttcgAAATGAGTAGGACCCGTT
CTCCATCGGCATCGGGGAGGGCTAATATGTATATTTGAAGAAAttcatag
aatttctatccaaatatcttctttcaggagattgaatggcagagcagcat
atgcatttcgccCTTTTATTGGGACTCAttagcactgcatactgcatcCT
GGCTAGGCAGATCGAATTTATGCTAGGAAATTCGATAAAACTAATTGTGT
CGCACACTGAAAGATATATATTTTacagaaatgttcttaaccatCTTGTC
TTTTTTCAGTTCACCTTATACTCATCACCTCTCAACTCAAGGACGGAAAA
TCTGCGTTGA Coding sequence (CDS) from alignment at sc0000089_pilon:601752..608461+ >XLOC_044125 ID=XLOC_044125|Name=XLOC_044125|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2454bp|location=Sequence derived from alignment at sc0000089_pilon:601752..608461+ (Clytia hemisphaerica_ch_hm2_pilon)
atgagTAGATGGAGAAGTACGTGTCCCGACAAATTACTGACCAGTATTGC
AAATATCTCAGAAGCTCGTTTGTACTTGTTGCGACAAACTGGTCCCACTG
GATTCCTTTTGAAAGAGCATGATGGCGAGACGAAGTTCAAGatgagTAGA
TGGAGAAGTACGTGTCCCGACAAATTACTGACCAGTATTGCAAATATCTC
AGAAGCTCGTTTGTACTTGTTGCGACAAACTGGTCCCACTGGATTCCTTT
TGAAAGAGCATGATGGCGAGACGAAGTTCAAGgttttgctTGGCGCTGTT
CACTCGTGCGattgtaatttctttttgaaagagAGGGAGCTTTGTAAACA
CATCCTATGgttttgctTGGCGCTGTTCACTCGTGCGattgtaatttctt
tttgaaagagAGGGAGCTTTGTAAACACATCCTATGgattttaatCAGAA
AATTTCGGATCCAAAAAGAAGATCCAAgattttaatCAGAAAATTTCGGA
TCCAAAAAGAAGATCCAATCGCGTTCCAGCTTGGTCTTTGTGAACGTGAG
CTAAACCATGTTCTGTATGGTCAGAAGCAAGTTGAGAATAAACAACCAAC
CAAAGCAGCATCTGCTGGTGCCAGAGAAATGTTGAAACAGAAGAAGATCG
AGAAAGAAGATGTCTGCCCCATCTGTCAAGATGAAATATACAAAACGAAA
AAGAGTTTAACTTACTGCAATCGCGTTCCAGCTTGGTCTTTGTGAACGTG
AGCTAAACCATGTTCTGTATGGTCAGAAGCAAGTTGAGAATAAACAACCA
ACCAAAGCAGCATCTGCTGGTGCCAGAGAAATGTTGAAACAGAAGAAGAT
CGAGAAAGAAGATGTCTGCCCCATCTGTCAAGATGAAATATACAAAACGA
AAAAGAGTTTAACTTACTGCAAgtttGGATGTGGAAACAGTGTTCACGTT
TCCTGTCTCAAGATTTGGGCTGACCATCAGCATAAATCAAACAACGAAGA
AGTTATCAAGTGCCCGCTCTGTCGAACCGAATTCGCTAGCTATAAAgttt
GGATGTGGAAACAGTGTTCACGTTTCCTGTCTCAAGATTTGGGCTGACCA
TCAGCATAAATCAAACAACGAAGAAGTTATCAAGTGCCCGCTCTGTCGAA
CCGAATTCGCTAGCTATAAAAGTATATTGCAAGAACATCGTCGCTCTGTC
ACTCGATCTCAGATGAGAAAAAATTCCCTGCTCAGTATTTGTGTTGGATG
TAAACAAAGAGCTCCTTCTACATCTTCTACTCAATCTGTTTACAAAGTAT
ATTGCAAGAACATCGTCGCTCTGTCACTCGATCTCAGATGAGAAAAAATT
CCCTGCTCAGTATTTGTGTTGGATGTAAACAAAGAGCTCCTTCTACATCT
TCTACTCAATCTGTTTACAAATGCAACACATGCAATTCGTTTCTTTGTCA
ATCCTGTTTCCATCCAAATAAACATTATGGACAccaagtgaaaacaaaac
atATGCAACACATGCAATTCGTTTCTTTGTCAATCCTGTTTCCATCCAAA
TAAACATTATGGACAccaagtgaaaacaaaacatGGAGGAGGAGAGAAGT
GGGAAGACTTGGGTTATAAAGAAGTTAATCTCTGTATTGGAGGTTTCTCC
TCTTCCATGACGTCATCACATGGCAAACAGGAGGAGGAGAGAAGTGGGAA
GACTTGGGTTATAAAGAAGTTAATCTCTGTATTGGAGGTTTCTCCTCTTC
CATGACGTCATCACATGGCAAACAATTTCCAAGCTCACCTTCAGCACCAG
TGAGGCCGAAACAAAAATTATCAAGACTTCGAAGTTCATCCCAAACTGAC
GTCCGTGATTTAGCCATCAGCGGACTCAGTCTAAACTCTGAAAAATTGGA
ACTAAACTATAAACCTGTTAGCGAACAAAGATTTCCAAGCTCACCTTCAG
CACCAGTGAGGCCGAAACAAAAATTATCAAGACTTCGAAGTTCATCCCAA
ACTGACGTCCGTGATTTAGCCATCAGCGGACTCAGTCTAAACTCTGAAAA
ATTGGAACTAAACTATAAACCTGTTAGCGAACAAAGATCTTCAAACGCTT
CTACTGCAAGATTTCGATTACCACCGATCGGGAAAACGAGAGGTTTAATC
GGAATGTCGGGGAAACATCGGAGTAAAAGTGGGACCGGGAATCAAACAGA
AGAACGGAAGGAAGTGGATATCTTCAAACGCTTCTACTGCAAGATTTCGA
TTACCACCGATCGGGAAAACGAGAGGTTTAATCGGAATGTCGGGGAAACA
TCGGAGTAAAAGTGGGACCGGGAATCAAACAGAAGAACGGAAGGAAGTGG
ATTTCACCTTATACTCATCACCTCTCAACTCAAGGACGGAAAATCTGCGT
TGATTCACCTTATACTCATCACCTCTCAACTCAAGGACGGAAAATCTGCG
TTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:601752..608461 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1177-1227:6660 |
| Aaloc | 1045-1176:5844 |
| Aaloc | 889-1041:5352 |
| Aaloc | 793-885:4844 |
| Aaloc | 712-792:4527 |
| Aaloc | 586-708:2088 |
| Aaloc | 463-585:1863 |
| Aaloc | 262-459:1366 |
| Aaloc | 220-258:508 |
| Aaloc | 142-216:252 |
| Aaloc | 1-141:1 |
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