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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000207_pilon:577268..580962+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033283 ID=XLOC_033283|Name=XLOC_033283|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3695bp|location=Sequence derived from alignment at sc0000207_pilon:577268..580962+ (Clytia hemisphaerica_ch_hm2_pilon)
TTGATAACGCAACACAATATTGCGCAATGCTTACAAGAAACCGGTAAAAC
GAAAGAAGCTCTCGAAATTTACCGAAAAGTGGAAGAGAAGCAACTGACAA
CACTTGGCAGTGATCATCCAAGTGTGTTGAGAACGCAACACAATATTGCA
CAATGCTTACAACAAACCGGTAAAACGAAAGAAGCTCTCGAAATTTACCG
AAAAGTGGAAGAGAAGCAACTGACAACACTTGGCAGTGATCATCAAAGTG
TGTTGATAACGCAACACAATATTGCACAATGCTTACAACAAACCGGTAAA
ACGAAAGAAGCTCTCGAAATGTACCAACGAGTGGAACAGAAGCAGCTAAA
AACATTTGGCACTGATCATCCAGATGTGTTGATAACGCAACACAATATTG
CACGATGCTTACAACAAAACGGTAAAACGAAAGAAGCTCTCGAAATTTAC
CGAAAAGTGGAAGAGAAGCAACTGACAACACTTGGCAGTGATCATCCAAG
TGTGTTGACAACGCAACACAATATTGCACAATGCTTACAACAAACTGGTA
AAACAAAAGAAGCTCTCAAAATGTACCAACGAGTGGAACAGAAGCAGCTA
AAAACATTTGGCACTGATCATCCAGATGTGTTGATAACGCAACACAATAT
TGCGCAATGCTTACAACAAACCGGTAAAACAAAAGAAGCTCTCGAAATGT
ACCAACGAGTGGAACAGAAGCAGCTAAAAACATTTGGCACTGATCATCCA
GATGTGTTGAAAACGCAACACTGTATTGCGCAATGCTTACAGCAAACCGG
TCACACGAAAGAAGCTCTCGAAATTTACCGAAAAGTGGAAGAGAAGCAGC
TGACAACACTTGGCAGTGATCATCAAAGTGTGTTGACAACGCAACACAAT
ATTGCGCaatgcttacaaaaaaacgGTAAAACGAAAGAAGCTCTCGAAAT
TTACCGACAAGTGGAACAGAAGCAGCTGACAACATTTGGCAGTGATCATC
CAGAATTGTTGACAACGCAACACAATATTGCGCAATGCTACaaaaaaaaa
CGGTAAAACGAAAGAAGCTCTCGAAATTTACCGACAAGTGGAACAGAAGC
AGCTGACAACACTTGGCAGTGATCATCAAAGTGTGTTGAACAACGCAACA
CAATATTGCGCaatgcttacaaaaaaacgGTAAAACGAAAGAAGCTCTCC
AAATTTACCGAAAAGTGGAAGAGAAGCAGCTGACAACACTTGGCAGTGAT
CATCAAAGTGTGTTGACAACGCCACACATATTGCGCAATGCTACAACAAA
CCGGTAAAACGAAAGAAGCTCTCGAAATTTACCGAAAAGTGGAGGAAGAG
AAGCAGCTGACAACACTTGGCAGTGATCATCAAAGTGTGTTGACAACGCA
ACACAATATTGCGCAATGCTTACAACAAACCGGTAAAACGAAAGAAGCTC
TCGAAATTTACCAACGAGTTGAAAAGAAGAAGCTGACAACACTTGGCAGT
GATCATCCAAGTGTGTTGACAACGCAACACAATATTGCGCAATGCTTACA
ACAAACCGGTCAAACGAAAGAAGCTCTCGAAATTTACCGACGAGTGGAAG
AGAAGCAGCTGACAACACTTGGCAGTGATCATCAAAGTGTGTTGACAACG
CAACACAATATTGCGCAATGCTTACAACAAACCGGTAAAACGAAAGAAGC
TCTCGAAATTTACCGAAAAGTGGAAGAGAAGCAACTGACAACACTTGGCA
GTGATCATCAAAGTGTGTTGACAACGCAACACAATATTGCGCAATGCTTA
CAACAAACCGGTAAAACGAAAGAAGCTCTCGAAATTTACCAACGAGTTGA
AAAGAAGAAGCTGACAACACTTGGCAGTGATCATCCAAGTGTGTTGACAA
CGCAACACAATATTGCGCAATGCTTACAACAAACCGGTCAAACGAAAGAA
GCTCTCGAAATTTACCGACGAGTGGAACAGAAGAAGTTGACAACACTTGG
CAGTGATCATCCAGATGTGTTGATAACGCAACACAATATTGCGCAATGCT
TACAAGAAACCGGTAAAACGAAAGAAGCTCTCGAAATTTACCGAAAAGTG
GAAGAGAAGAGAAGCAACTGACAACACTTGGCAGTGATCATCCAAGTGTG
TTGAGAACGCAACACAATATTGCCACAATGCTTACAACAAACCGGTAAAC
CGAAAGAATGCTCTCGAAATTTACGAAAAAGTGGAAGAGAAGCAGCTGAC
AACACTTGGCCAGTGATTATCAAAGTGTGTTGATAACGCAACACACTATT
GCACACTGCTTACAACCAAACCGGGTAAAACGAAGAAGACGCTTCGAAAT
TTACCGAAAAAGTGGAAGAGAAGCAGCTGACAACACTTGGCAGTGATCAT
CAAAGTGTGTTGATAACGCAACACAATATTGCACAATGCTTACAACAAAC
CGGTAAAACGAAAGAAGCTCTCGAAATGTACCAACGAGTGGAACAGAAGC
AGCTAAAAACATTTGGCACTGATCATCCAGATGTGTTGATAACGCAACAC
AATATTGCACGATGCTTACAACAAAACGGTAAAACGAAAGAAGCTCTCGA
AATTTACCGAAAAGTGGAAGAGAAGCAACTGACAACACTTGGCAGTGATC
ATCCAAGTGTGTTGACAACGCAACACAATATTGCACAATGCTTACAACAA
ACTGGTAAAACAAAAGAAGCTCTCGAAATGTACCAACGAGTGGAACCGAA
GCAGCTAAAAACATTTGCACTGATCATCCAGATGTGTTGATAACGCAACA
CAATATTGCGCAATGCTTACAACAAACCGGTAAAACAAAAGAAGCTCTCG
AAATGTACCAACGAGTGGAACAGAAGCAGCTAAAAACATTTGGCACTGAT
CATCCAGATGTGTTGATAACGCAACACAATATTGCGCAATGCTTACAACA
AACCGGTCAAACAAAAGAAGCTCTCGAAATTTACCGACGAGTGGAACAGA
AGCAGCTAAAAACATTTGGCACTGATCATCCAGATGTGTTGATAACGCAA
AGTCATATGGCAGATTCTTTGGTAGATATTGAACAGAAGGAGGAAGCCGT
TGTCATTTACAAACAGGTCGCGTCAAAACAATTGAACGTTCTTGGTGAAC
AACACCCAAACTTACTCACCACGAAATACAATTTAGCTGTTTGCTTAAAC
AAAATGGGACGAATTGAAGAAGCTTTGGAGATATTTAGAGAAGTGGAGCA
AGTGGAAATGACAACACTTGACGAAAACCATCCATCATTGGTGAGAACCA
AGGAGTTCATCGAAATGTGCTTGGAAGATTTGAAATCAAGTAATAAAAGG
TTAGTTTATCATAAAAATGGAGGTCTTATTCAGATTTTGTGGTGATATCT
GAAATACCGAGACAAGGTTCTGTAATGATGTCATTCATCAATCATAAATA
CTTCAAATGATGATGGCAAgaatttttaagcattttgCGCAGTTTTACGT
TACTTTACTCAGATTCAAGTTTTTGGTGCGACATTGAAAGTATTCTCACG
gaaggaaaatttcaaatgatGGACTGATTTTGTGAagattgacaatcaaa
tattaaaTGTATTATCTTTAAGTTATCCGTTTATATTTATTGCGtttaaa
tgctttttttttaGTGTCCTGAAGAGCCGATGTGTTATTGTATGA Coding sequence (CDS) from alignment at sc0000207_pilon:577268..580962+ >XLOC_033283 ID=XLOC_033283|Name=XLOC_033283|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1440bp|location=Sequence derived from alignment at sc0000207_pilon:577268..580962+ (Clytia hemisphaerica_ch_hm2_pilon)
TTGATAACGCAACACAATATTGCGCAATGCTTACAAGAAACCGGTAAAAC
GAAAGAAGCTCTCGAAATTTACCGAAAAGTGGAAGAGAAGCAACTGACAA
CACTTGGCAGTGATCATCCAATTGATAACGCAACACAATATTGCGCAATG
CTTACAAGAAACCGGTAAAACGAAAGAAGCTCTCGAAATTTACCGAAAAG
TGGAAGAGAAGCAACTGACAACACTTGGCAGTGATCATCCAAATGTGTTG
ATAACGCAACACAATATTGCGCAATGCTTACAACAAACCGGTAAAACAAA
AGAAGCTCTCGAAATGTACCAACGAGTGGAACAGAAGCAGCTAAAAACAT
TTGGCACTGATCATCCAGATGTGTTGATAACGCAACACAATATTGCGCAA
TGCTTACAACAAACCGGTCAAACAAAAGAAGCTCTCGAAATTTACCGACG
AGTGGAACAGAAGCAGCTAAAAACATTTGGCACTGATCATCCAGATGTGT
TGATAACGCAAAGTCATATGGCAGATTCTTTGGTAGATATTGAACAGAAG
GAGGAAGCCGTTGTCATTTACAAACAGGTCGCGTCAAAACAATTGAACGT
TCTTGGTGAACAACACCCAAACTTACTCACCACGAAATACAATTTAGCTG
TTTGCTTAAACAAAATGGGACGAATTGAAGAAGCTTTGGAGATATTTAGA
GAAGTGGAGCAAGTGGAAATGACAACACTTGACGAAAACCATCCATCATT
GGTGAGAACCAAGGAGTTCATCGAAATGTGCTTGGAAGATTTGAAATCAA
GTAATAAAAGATGTGTTGATAACGCAACACAATATTGCGCAATGCTTACA
ACAAACCGGTAAAACAAAAGAAGCTCTCGAAATGTACCAACGAGTGGAAC
AGAAGCAGCTAAAAACATTTGGCACTGATCATCCAGATGTGTTGATAACG
CAACACAATATTGCGCAATGCTTACAACAAACCGGTCAAACAAAAGAAGC
TCTCGAAATTTACCGACGAGTGGAACAGAAGCAGCTAAAAACATTTGGCA
CTGATCATCCAGATGTGTTGATAACGCAAAGTCATATGGCAGATTCTTTG
GTAGATATTGAACAGAAGGAGGAAGCCGTTGTCATTTACAAACAGGTCGC
GTCAAAACAATTGAACGTTCTTGGTGAACAACACCCAAACTTACTCACCA
CGAAATACAATTTAGCTGTTTGCTTAAACAAAATGGGACGAATTGAAGAA
GCTTTGGAGATATTTAGAGAAGTGGAGCAAGTGGAAATGACAACACTTGA
CGAAAACCATCCATCATTGGTGAGAACCAAGGAGTTCATCGAAATGTGCT
TGGAAGATTTGAAATCAAGTAATAAAAGTGTCCTGAAGAGCCGATGTGTT
ATTGTATGATGTCCTGAAGAGCCGATGTGTTATTGTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000207_pilon | genome | sc0000207_pilon:577268..580962 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 691-720:3666 |
| Aaloc | 124-687:2784 |
| Aaloc | 1-120:1 |
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