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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000017_pilon:79570..82854+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036398 ID=XLOC_036398|Name=XLOC_036398|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3285bp|location=Sequence derived from alignment at sc0000017_pilon:79570..82854+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaACGAgtttgaagaaataaaaataaaagttgaacAAGAAGAAGATCA
TGGTTGTAATGAAACGAATCATGAACATTTGGAAATTTTAATCAAACTGG
AAGATGAATCAGTTGGATATTCAGATGACGAAAATATGGAACCAATTAAA
AACCATGAAAATGAACTATCTAAaaattcttgtagaaatgtAAAGGGGAA
CGATGTTACATCATCCGAAGAAACAAACCcacaaaattatgaaattagcA
TTAAACTTGAAGATGAGTCAAAACCTCAAGATAATCAAAGTGCTAaatca
atgcaatttttggaaaatcgaaATTCAGTAAATATTAACGATGGAACAAA
TTGTTTTGATCAGCTTTCACCGAATGCAGGAATGAGTTCACAGATCGGGG
AGGAAATCACTATTAAGTTTGAAGATGAATTAGAAAGGTTTCAAaaccat
gaaaatgaaaatatacagGAATGTTTTGAGGCTAACAAGACTGAAAATTC
TAATAATGACCACTTGACAGGTGCAGATGGTTTTGATTACGATCAAAGTA
TTAAACCTTTCAAGTGTAATGAATGTGGTGAACGATTTTACCAAGAAAGC
ACTCTAACTCGACACAAAGGGATCCATAAAGGATATAAGTATAGATGTAA
ACAATGTGATAAAGGTTATAAtgctaaaaatgctcttattCAACATCACA
AAGATCTTCACAAAGATTTGAAATCCTTCAAATGTGACAAATGCCATAAA
GCCTTTAGCAGCGAAACTTACTTGACAATCCATCAAAGATCAGTTCATGA
GGGAGTTAAACCATTTGAATGTCAAGTATGTGGTAAATGTTTTGCACTAA
AAAGACAATTAACTTCTCATCACAGATTTGTCCATGAAGGTATAAAGCCT
TAtaaatgtcaagaatgtggtaaatgttttGCTAGAAAGAGTTATTTGAA
GCGGCATAAATTACTAGTTCATGATGAGATAAAGGATTTTGAGTGTCAGg
aatgtggtaaatgttttGCTACAAAAGGTAATCTGAAGCGGCATAAATTA
ACAGTTCATGACGGGATATAGGCTTTTGTGTGTCAGGAATATGGTAAATC
TTTTGCAGAGAAAAGAAACTTAACTTTGCATCAAAGAACTATCCATCAAG
GTTAAAAAACTGTtaatgtcaagaatgtggtaaatctcTTGCTacaaaga
tttatttttaaaaacctcaAAGAACTGTCCATGATAAAGCCTTTTGAGTG
TCAAAACTATGGAaatacttttgctgaaaaaggtTCGTTATAggaacatc
aaagaaaagcacATGATAAAATCTACACTTTTCAATGTCATGAATGTGGT
CAATCTTTTGCATTTAGGttttttttACAGAGGCGTCAAAAGGATGTTAA
TGAGAGAATGAAAGCTTTATGTGTGAAAGTGTTGCAAACCTTTTGCAggg
aaaactaatttgaagatgcACCAAAGAACAAGCGAATAGgcgataagaac
atttttagatcCTAAAAACGAAAGTCTCATCGGATTTTGTCATCGATCTA
TAGAGCTCCCTATAGTGCCTTCAACAGAGCTTTCTTCTTCCAAGCTGGAA
CAGATGATAATGCGCTGCAaacctttcttaaaaatgttcaaatttgTAAT
AGATTTTACCAAATTATATTTAACActtcttttgacattttcaaacaTAA
TAATTTCAATTCTGGTACTGTATCTTTCTTTCGTTTAgagtattttgttt
aaaaaatgaatgagattgaaggaatcaaaataaaaattgaagaagaagaa
attcatGGTGGTGACGAAACGAATCATGAACATTTGGAAATTGTTATCAA
ACTGGAAAATGAATCAATTGGATATCCAGACAACGAAATTTTGGAACCAT
TCAAAAACCGTGAAAatgaactatttaaaaattattgtaGAAATGTAAAG
GGGAACGATGTTACATCACCCGAAAAAACTGACctcaaaaattatgaaat
tagcATTAAACTTGAAGATGAGTCAAAACTTCAAGATGATAAGAATGAAA
GTCTAAAATTAATTGATATttcggaaaataaaaattcagaatataTTAAC
GATGGAATGAATTGTTTTAATCAGTTTTCACCGATTGAAGAAATTAATTC
ACAGATTGGGGAGGAAATCACTATCAAATTTGAAgatgaattggaaagct
ttcacaaccatgaaaataaaatttcgcAGGAATGTTTTGAGGTTTATAAG
ATTGAAAATCCAACCgttgacaaaataatgaaaggTTCGGTTAAGGAACA
CCAAACAACAGTTCACGATAAACCTTTTACATGTCTTGTATGTGGTAAGT
CTTTTACATTGAAAAGTAATTTGAAGGTGCATCAAAGAACAGTCCATCAA
GGTATAAAACCATTTTTGTGTCAAGAATGTGATAAATCTTTTGGAAATAA
AACGAAATTAACTTCCCATCAAAGAACTGTTCATCAAGGCATAAAGGCCT
TTAAATGTCAAGATTGTGGTAAATGTTTTGCTACAAAGAGAAATTTGGTG
AGGCACCAAAGAACAGTCCATCAAGGTATAAAGCCTTTtaaatgtcaaga
atgtggtcTGCTTTTTGGGcggaaatatgatttagagagcCATCATAGAA
TTGTCCATGAAGGGATAAAGGCATTTGAGTGTCAGGAATGTGGTGAATCT
TTTGCTACAAACAGAAATTTGGTGATGCATCAAGTAACTGTTCATGAGGG
GATAAATCCTTTTGagtgtcaagaatgtggtaagtCTTTAGGAAGCAAAT
CAAACTTAACTTCGCACCAAAGAACTGTCCATCAAGGTATAAAGGCCTTt
aaatgtcaagaatgtggtgAATCTTTAGCTACTAAGAGAAATTTGGAGAG
GCATAAAGTAACAGTCCATCAAGGTCTAAAGGCTTTTgaatgtcaagaat
gtggtcTGCTTTTTGGGCGGAAATATGATTTGGTGAGGCATCATAGAATT
GTCCATGAAGGTATAAAGGCATTTGAGTGTCAggaatgtggtaaatcttt
tggaCAGCAAAAGAACTTAACTTCTCATCAAAGAACTGTTCATCAAGGTA
TAAAGCCATTtaaatgtcaagaatgtggtaaaagtTTTGGGCAGAAAACG
AACTTAACTTCCCATCAAAGAACAGTTCATCAAGGTGTAAAGCCCTTtaa
atgtcaagaatgtggtaaatcttttggaCAGAAAACGAACTTAACTTCCC
ATCAAAGAACTGTCCATCAAGGTATAAAGGTGTAA Coding sequence (CDS) from alignment at sc0000017_pilon:79570..82854+ >XLOC_036398 ID=XLOC_036398|Name=XLOC_036398|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3060bp|location=Sequence derived from alignment at sc0000017_pilon:79570..82854+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaACGAgtttgaagaaataaaaataaaagttgaacAAGAAGAAGATCA
TGGTTGTAATGAAACGAATCATGAACATTTGGAAATTTTAATCAAACTGa
tgaACGAgtttgaagaaataaaaataaaagttgaacAAGAAGAAGATCAT
GGTTGTAATGAAACGAATCATGAACATTTGGAAATTTTAATCAAACTGGA
AAATGAATCAATTGGATATCCAGACAACGAAATTTTGGAACCATTCAAAA
ACCGTGAAAatgaactatttaaaaattattgtaGAAATGTAAAGGGGAAC
GATGTTACATCACCCGAAAAAACTGACctcaaaaattatgaaattagcAT
TAAACTTGAAGATGAGTCAAAACTTCAAGATGATAAGAATGAAAGTCTAA
AATTAATTGATATttcggaaaataaaaattcagaatataTTAACGATGGA
ATGAATTGTTTTAATCAGTTTTCACCGATTGAAGAAATTAATTCACAGAT
TGGGGAGGAAATCACTATCAAATTTGAAgatgaattggaaagctttcaca
accatgaaaataaaatttcgcAGGAATGTTTTGAGGTTTATAAGATTGAA
AATCCAACCgttgacaaaataatgaaaggTTCGGTTAAGGAACACCAAAC
AACAGTTCACGATAAACCTTTTACATGTCTTGTATGTGGTAAGTCTTTTA
CATTGAAAAGTAATTTGAAGGTGCATCAAAGAACAGTCCATCAAGGTATA
AAACCATTTTTGTGTCAAGAATGTGATAAATCTTTTGGAAATAAAACGAA
ATTAACTTCCCATCAAAGAACTGTTCATCAAGGCATAAAGGCCTTTAAAT
GTCAAGATTGTGGTAAATGTTTTGCTACAAAGAGAAATTTGGTGAGGCAC
CAAAGAACAGTCCATCAAGGTATAAAGCCTTTtaaatgtcaagaatgtgg
tcTGCTTTTTGGGcggaaatatgatttagagagcCATCATAGAATTGTCC
ATGAAGGGATAAAGGCATTTGAGTGTCAGGAATGTGGTGAATCTTTTGCT
ACAAACAGAAATTTGGTGATGCATCAAGTAACTGTTCATGAGGGGATAAA
TCCTTTTGagtgtcaagaatgtggtaagtCTTTAGGAAGCAAATCAAACT
TAACTTCGCACCAAAGAACTGTCCATCAAGGTATAAAGGCCTTtaaatgt
caagaatgtggtgAATCTTTAGCTACTAAGAGAAATTTGGAGAGGCATAA
AGTAACAGTCCATCAAGGTCTAAAGGCTTTTgaatgtcaagaatgtggtc
TGCTTTTTGGGCGGAAATATGATTTGGTGAGGCATCATAGAATTGTCCAT
GAAGGTATAAAGGCATTTGAGTGTCAggaatgtggtaaatcttttggaCA
GCAAAAGAACTTAACTTCTCATCAAAGAACTGTTCATCAAGGTATAAAGC
CATTtaaatgtcaagaatgtggtaaaagtTTTGGGCAGAAAACGAACTTA
ACTTCCCATCAAAGAACAGTTCATCAAGGTGTAAAGCCCTTtaaatgtca
agaatgtggtaaatcttttggaCAGAAAACGAACTTAACTTCCCATCAAA
GAACTGTCCATCAAGGTATAAAGGTGTAAGAAAATGAATCAATTGGATAT
CCAGACAACGAAATTTTGGAACCATTCAAAAACCGTGAAAatgaactatt
taaaaattattgtaGAAATGTAAAGGGGAACGATGTTACATCACCCGAAA
AAACTGACctcaaaaattatgaaattagcATTAAACTTGAAGATGAGTCA
AAACTTCAAGATGATAAGAATGAAAGTCTAAAATTAATTGATATttcgga
aaataaaaattcagaatataTTAACGATGGAATGAATTGTTTTAATCAGT
TTTCACCGATTGAAGAAATTAATTCACAGATTGGGGAGGAAATCACTATC
AAATTTGAAgatgaattggaaagctttcacaaccatgaaaataaaatttc
gcAGGAATGTTTTGAGGTTTATAAGATTGAAAATCCAACCgttgacaaaa
taatgaaaggTTCGGTTAAGGAACACCAAACAACAGTTCACGATAAACCT
TTTACATGTCTTGTATGTGGTAAGTCTTTTACATTGAAAAGTAATTTGAA
GGTGCATCAAAGAACAGTCCATCAAGGTATAAAACCATTTTTGTGTCAAG
AATGTGATAAATCTTTTGGAAATAAAACGAAATTAACTTCCCATCAAAGA
ACTGTTCATCAAGGCATAAAGGCCTTTAAATGTCAAGATTGTGGTAAATG
TTTTGCTACAAAGAGAAATTTGGTGAGGCACCAAAGAACAGTCCATCAAG
GTATAAAGCCTTTtaaatgtcaagaatgtggtcTGCTTTTTGGGcggaaa
tatgatttagagagcCATCATAGAATTGTCCATGAAGGGATAAAGGCATT
TGAGTGTCAGGAATGTGGTGAATCTTTTGCTACAAACAGAAATTTGGTGA
TGCATCAAGTAACTGTTCATGAGGGGATAAATCCTTTTGagtgtcaagaa
tgtggtaagtCTTTAGGAAGCAAATCAAACTTAACTTCGCACCAAAGAAC
TGTCCATCAAGGTATAAAGGCCTTtaaatgtcaagaatgtggtgAATCTT
TAGCTACTAAGAGAAATTTGGAGAGGCATAAAGTAACAGTCCATCAAGGT
CTAAAGGCTTTTgaatgtcaagaatgtggtcTGCTTTTTGGGCGGAAATA
TGATTTGGTGAGGCATCATAGAATTGTCCATGAAGGTATAAAGGCATTTG
AGTGTCAggaatgtggtaaatcttttggaCAGCAAAAGAACTTAACTTCT
CATCAAAGAACTGTTCATCAAGGTATAAAGCCATTtaaatgtcaagaatg
tggtaaaagtTTTGGGCAGAAAACGAACTTAACTTCCCATCAAAGAACAG
TTCATCAAGGTGTAAAGCCCTTtaaatgtcaagaatgtggtaaatctttt
ggaCAGAAAACGAACTTAACTTCCCATCAAAGAACTGTCCATCAAGGTAT
AAAGGTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000017_pilon | genome | sc0000017_pilon:79570..82854 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 100-1530:1855 |
| Aaloc | 1-99:1 |
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